prot_H-paniculata_contig571.13259.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig571.13259.1
Unique Nameprot_H-paniculata_contig571.13259.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length187
Homology
[Close]
BLAST of mRNA_H-paniculata_contig571.13259.1 vs. uniprot
Match: A0A6H5JZH0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZH0_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.490e-13
Identity = 57/141 (40.43%), Postives = 81/141 (57.45%), Query Frame = 0 
Query:   43 VSVGASGEGGLYYLNAAELAAIESKKTREKLKNKAERVENFHRKVVKRVAAERRTADA-AAGRRKPRHMYPTA------GSGIATQGLLVHGEDPSLWPASFSQNEALHYHQPVRVKGERGDVASLLNADIEARRALAAYR 176
            V V A+   G   L+AA+LA+ ES+KTR+KLK KA+ V  FHRKVV+R+A E+R A A   G R  +    +A      G  +  +GL       +    +  ++EA ++ Q ++V G RG   SL +AD E+R ALAAYR
Sbjct:   35 VVVAAADNDGPCGLSAADLASFESEKTRDKLKLKADHVAKFHRKVVRRLATEKRAAHAHTRGGRAVKAQIGSADSFANFGDRLEPRGLAPREAQGTPREHTLPRDEAPNF-QAIKVIGVRGHKGSLADADTESRMALAAYR 174
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig571.13259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZH0_9PHAE2.490e-1340.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig571contigH-paniculata_contig571:30992..33267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig571.13259.1mRNA_H-paniculata_contig571.13259.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig571 29600..33357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig571.13259.1 ID=prot_H-paniculata_contig571.13259.1|Name=mRNA_H-paniculata_contig571.13259.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MSRMESVRKGDLLLHDDIQFGSSPHIIHATPPDLAPASPFSEVSVGASGE
GGLYYLNAAELAAIESKKTREKLKNKAERVENFHRKVVKRVAAERRTADA
AAGRRKPRHMYPTAGSGIATQGLLVHGEDPSLWPASFSQNEALHYHQPVR
VKGERGDVASLLNADIEARRALAAYRVSSDAETGQG*
back to top