prot_H-paniculata_contig5699.13242.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5699.13242.1
Unique Nameprot_H-paniculata_contig5699.13242.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
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BLAST of mRNA_H-paniculata_contig5699.13242.1 vs. uniprot
Match: D7FWG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG0_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.200e-27
Identity = 61/117 (52.14%), Postives = 78/117 (66.67%), Query Frame = 0 
Query:    1 MGGSSSTPLSVTSG-------VRVTVKERYQPYLPPGTNLNAVINQEKIKLVHEHWSYIADEQDNKTSRCSTKQSRISKFYDAFYEKLFQEAPDTRDLFEGNMVRQSRALVKVCMFL 110
            MG  +S P  + +G       VRV VKERY  YLP   NL+A + +EK++LV  HW+ IA+E D          SRIS FYDAFYEKLF++AP T++LF+GNMVRQSRALVK+  +L
Sbjct:    1 MGVGASAPPPLPTGRQAEGVRVRVAVKERYLAYLPQYINLDAALTEEKVRLVANHWNLIAEEDDTGMQDAGLAPSRISVFYDAFYEKLFEKAPKTKNLFDGNMVRQSRALVKMVSWL 117
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BLAST of mRNA_H-paniculata_contig5699.13242.1 vs. uniprot
Match: A0A6H5JHL4_9PHAE (GLOBIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHL4_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 5.480e-12
Identity = 33/43 (76.74%), Postives = 39/43 (90.70%), Query Frame = 0 
Query:   68 SRISKFYDAFYEKLFQEAPDTRDLFEGNMVRQSRALVKVCMFL 110
            SRIS FYDAFYEKLF++AP T+DLF+GNMVRQSRALVK+  +L
Sbjct:    9 SRISVFYDAFYEKLFEKAPKTKDLFDGNMVRQSRALVKMVSWL 51
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BLAST of mRNA_H-paniculata_contig5699.13242.1 vs. uniprot
Match: A0A6A4ZSW8_9STRA (GLOBIN domain-containing protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZSW8_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 6.330e-5
Identity = 25/79 (31.65%), Postives = 41/79 (51.90%), Query Frame = 0 
Query:   28 PPGTNLNAVINQEKIKLVHEHWSYIADEQDNKTSRCSTKQSRISKFYDAFYEKLFQEAPDTRDLFEGNMVRQSRALVKV 106
            P   ++   I     + V+E+W  IA+       R     S +  FYD+FY KLF+ AP+ R LF  +++ Q +AL+ +
Sbjct:   59 PDFAHVRCKITPSMQRAVNENWEAIANGTTFAMQRKGHASSPVVYFYDSFYTKLFEVAPEVRSLFRTSIIVQGKALINI 137
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5699.13242.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FWG0_ECTSI1.200e-2752.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHL4_9PHAE5.480e-1276.74GLOBIN domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6A4ZSW8_9STRA6.330e-531.65GLOBIN domain-containing protein (Fragment) n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012292Globin/ProtoglobinGENE3D1.10.490.10coord: 38..110
e-value: 4.7E-8
score: 35.4
IPR009050Globin-like superfamilySUPERFAMILY46458Globin-likecoord: 69..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5699contigH-paniculata_contig5699:7643..13485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5699.13242.1mRNA_H-paniculata_contig5699.13242.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5699 7293..13485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5699.13242.1 ID=prot_H-paniculata_contig5699.13242.1|Name=mRNA_H-paniculata_contig5699.13242.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MGGSSSTPLSVTSGVRVTVKERYQPYLPPGTNLNAVINQEKIKLVHEHWS
YIADEQDNKTSRCSTKQSRISKFYDAFYEKLFQEAPDTRDLFEGNMVRQS
RALVKVCMFL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012292Globin/Proto
IPR009050Globin-like_sf