prot_H-paniculata_contig568.13220.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig568.13220.1
Unique Nameprot_H-paniculata_contig568.13220.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length662
Homology
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BLAST of mRNA_H-paniculata_contig568.13220.1 vs. uniprot
Match: D8LIX3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIX3_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 3.720e-14
Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 0 
Query:    1 MPKPAGWQGQQVVEIRRDWIMFLATGLGIDTTLYSSPELENQLARKMLEQAERNFFESSSEEWDTDDDEDTGSDYWDENEGTDPRRGRSGGIQRGQSCRSRSRSR 105
            M KPAGWQ +Q VEIRRDWI FLA G+GIDT   +  +LE  + R MLEQAE + F+ S +EWDTD++E        E +   P+  R  G+ +G+  RS SR+R
Sbjct:    1 MQKPAGWQEEQAVEIRRDWIAFLADGMGIDTRGATGADLEALVVRTMLEQAEDDLFQDSFDEWDTDEEE--------EEDRLHPKGERRKGVAKGRKSRSHSRTR 97
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BLAST of mRNA_H-paniculata_contig568.13220.1 vs. uniprot
Match: A0A6H5L593_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L593_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 5.490e-14
Identity = 65/155 (41.94%), Postives = 90/155 (58.06%), Query Frame = 0 
Query:    1 MPKPAGWQGQQVVEIRRDWIMFLATGLGIDTTLYSSPELENQLARKMLEQAERNFFESSSEEWDTDDDEDTGSDYWDENEGTDPRRGRSGGIQRGQSCRSRSRSRGRRAAVPVGSGNSSRDS------SGRPRRPRSAGVLG-RVLRRAQTTGDV 148
            M KPAGWQ +Q VEIRRDWI FLA G+GIDT   +  +LE  + R MLEQAE + F+ S +EWDTD++E+       + E  + R+G    + +G+  RS SR+R   +                     + R+PR  GVLG ++LRR+QTTGD+
Sbjct:    1 MQKPAGWQEEQAVEIRRDWIAFLADGMGIDTRGATGADLEALVVRTMLEQAEDDLFQDSFDEWDTDEEEEEDK-LHPKGERPEQRKG----VAKGRRSRSHSRTRYVSSCAEXXXXXXXXXXXXXXXXKAKRRQPRG-GVLGSKLLRRSQTTGDM 149
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig568.13220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIX3_ECTSI3.720e-1448.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L593_9PHAE5.490e-1441.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig568contigH-paniculata_contig568:9804..15296 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig568.13220.1mRNA_H-paniculata_contig568.13220.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig568 9519..21885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig568.13220.1 ID=prot_H-paniculata_contig568.13220.1|Name=mRNA_H-paniculata_contig568.13220.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=662bp
MPKPAGWQGQQVVEIRRDWIMFLATGLGIDTTLYSSPELENQLARKMLEQ
AERNFFESSSEEWDTDDDEDTGSDYWDENEGTDPRRGRSGGIQRGQSCRS
RSRSRGRRAAVPVGSGNSSRDSSGRPRRPRSAGVLGRVLRRAQTTGDVGR
RRSHNQDGKVRRDKGATRHGDGTMPKHGSALTSSASQDGDPADSRGTSSA
SVLKGGDAADSRDVSSAKGSGSDNGISRHRTSRSSNDSSLVGSALSSGSP
GRVNGGGGGGSSSISKSGVSSRSHLNAWRQKISSEGVARAGVKARDKHAG
NHQVAVISSRHAVADGEGEKGKSIGPVLDVVDDLAPGQDPGGPQEKYFAA
GHASPDKGNSLGATTRSGSHRKSSQGSRDSTASNDFRVKSRLDGSVAPTE
GRGVGGGRESSHSEPSASTGANAVYGGGSSRSSRSLIATRVSSRSSFGMD
DKSDRSRKRGTPRERGQRSQESSRTPSSRDGSRERHESSRSRRQVSSNDV
FVAERARDRSRERSSEDHSWERSSGDRSRERSSGDRSRDDRQETVLGSHL
QETVLGSDCQEIVLGSDRQGNVLWSGRQATALVTAWAGPEVTRAGVLRET
EYPGKPEINPGSDPQENALANAWTGLEVTGVAVLGATKRQNLDEIETVRG
SDRHGKGLVNA*
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