prot_H-paniculata_contig5662.13197.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5662.13197.1
Unique Nameprot_H-paniculata_contig5662.13197.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length64
Homology
BLAST of mRNA_H-paniculata_contig5662.13197.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 4.670e-13
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MTGKVVLLNKPLYGLKQASKQWHKRLVSNMKKLGFEQCLVDPCVLRLTVDGDMATIFVFKLS 62
            ++GK+V L + LYGLKQAS+ WHK LV  MK LGFEQC  D CV+RL  +G +A + V  + 
Sbjct:  740 LSGKIVRLRRSLYGLKQASRTWHKHLVRGMKCLGFEQCAADACVMRLIEEGVVAMVVVVHVD 801          
BLAST of mRNA_H-paniculata_contig5662.13197.1 vs. uniprot
Match: A0A6H5KG18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG18_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 5.910e-13
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 MTGKVVLLNKPLYGLKQASKQWHKRLVSNMKKLGFEQCLVDPCVLRLTVDGDMATIFVFKLS 62
            ++G +V L + LYGLKQAS+ WHK LV  MK LGFEQC  D CV+RL  +G MA + V  + 
Sbjct:  109 LSGNIVRLRRSLYGLKQASRTWHKHLVRGMKCLGFEQCAADACVMRLIEEGIMAMVVVVHVD 170          
BLAST of mRNA_H-paniculata_contig5662.13197.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.200e-12
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 MTGKVVLLNKPLYGLKQASKQWHKRLVSNMKKLGFEQCLVDPCVLRLTVDGDM 53
            M+GKVV LNK LYGLKQAS+ ++KRLVS++K++GFEQ L DPCVLR  +  ++
Sbjct:  917 MSGKVVRLNKSLYGLKQASRTFYKRLVSDLKRIGFEQSLSDPCVLRFMMGDEV 969          
BLAST of mRNA_H-paniculata_contig5662.13197.1 vs. uniprot
Match: A0A6H5KGA6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA6_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.430e-12
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MTGKVVLLNKPLYGLKQASKQWHKRLVSNMKKLGFEQCLVDPCVLRLTVDGDM 53
            MTGKVV L K LYGL+QAS+ +HKRLVS++K++GFEQ L DPCVLR  +  ++
Sbjct:    1 MTGKVVRLGKSLYGLRQASRIFHKRLVSDLKRIGFEQSLSDPCVLRFMMGDEV 53          
BLAST of mRNA_H-paniculata_contig5662.13197.1 vs. uniprot
Match: A0A6H5K3C4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C4_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.620e-12
Identity = 33/58 (56.90%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 MTGKVVLLNKPLYGLKQASKQWHKRLVSNMKKLGFEQCLVDPCVLRLTVDGDMATIFV 58
            ++G VV L + LYGLKQAS+ W   L+  MK+LGFEQC  DPCV+RL  DGD+ T+ V
Sbjct:  473 LSGTVVKLARNLYGLKQASRMWPYHLLRAMKRLGFEQCAADPCVMRLMEDGDVVTMVV 530          
BLAST of mRNA_H-paniculata_contig5662.13197.1 vs. uniprot
Match: A0A6H5JQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD0_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 2.800e-12
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MTGKVVLLNKPLYGLKQASKQWHKRLVSNMKKLGFEQCLVDPCVLRLTVDGDM 53
            M+GKVV LNK LYGLKQAS+ ++KRLVS +K++GFEQ + DPCVLR  +  ++
Sbjct:  119 MSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEV 171          
BLAST of mRNA_H-paniculata_contig5662.13197.1 vs. uniprot
Match: A0A6H5KN43_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN43_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 3.010e-12
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MTGKVVLLNKPLYGLKQASKQWHKRLVSNMKKLGFEQCLVDPCVLRLTVDGDM 53
            MTGKVV L+K LYGL+QAS+ +HKRLVS++K++GFEQ L DPCVL   +  ++
Sbjct:  286 MTGKVVRLDKSLYGLRQASRTFHKRLVSDLKRIGFEQSLSDPCVLHFMMGDEV 338          
BLAST of mRNA_H-paniculata_contig5662.13197.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 3.030e-12
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MTGKVVLLNKPLYGLKQASKQWHKRLVSNMKKLGFEQCLVDPCVLRLTVDGDM 53
            M+GKVV LNK LYGLKQAS+ ++KRLVS +K++GFEQ + DPCVLR  +  ++
Sbjct:  684 MSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEV 736          
BLAST of mRNA_H-paniculata_contig5662.13197.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 3.030e-12
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MTGKVVLLNKPLYGLKQASKQWHKRLVSNMKKLGFEQCLVDPCVLRLTVDGDM 53
            M+GKVV LNK LYGLKQAS+ ++KRLVS +K++GFEQ + DPCVLR  +  ++
Sbjct:  585 MSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEV 637          
BLAST of mRNA_H-paniculata_contig5662.13197.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 3.040e-12
Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    1 MTGKVVLLNKPLYGLKQASKQWHKRLVSNMKKLGFEQCLVDPCVLRLTVDGDM 53
            M+GKVV LNK LYGLKQAS+ ++KRLVS +K++GFEQ + DPCVLR  +  ++
Sbjct:  852 MSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEV 904          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5662.13197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCD8_9PHAE4.670e-1353.23Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KG18_9PHAE5.910e-1353.23Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JB16_9PHAE1.200e-1262.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KGA6_9PHAE1.430e-1262.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K3C4_9PHAE1.620e-1256.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQD0_9PHAE2.800e-1260.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KN43_9PHAE3.010e-1260.38Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L3Y0_9PHAE3.030e-1260.38Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KKK1_9PHAE3.030e-1260.38Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE3.040e-1260.38Integrase catalytic domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5662contigH-paniculata_contig5662:3822..4013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5662.13197.1mRNA_H-paniculata_contig5662.13197.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5662 3822..4114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5662.13197.1 ID=prot_H-paniculata_contig5662.13197.1|Name=mRNA_H-paniculata_contig5662.13197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp
MTGKVVLLNKPLYGLKQASKQWHKRLVSNMKKLGFEQCLVDPCVLRLTVD
GDMATIFVFKLSI*
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