prot_H-paniculata_contig5513.12990.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5513.12990.1
Unique Nameprot_H-paniculata_contig5513.12990.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length113
Homology
BLAST of mRNA_H-paniculata_contig5513.12990.1 vs. uniprot
Match: D8LG73_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG73_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 6.910e-49
Identity = 77/97 (79.38%), Postives = 89/97 (91.75%), Query Frame = 0
Query:    7 KLIGEARRQLDPVDKLITEAKWDAIRNIIKTYPLADMKNVISELSRQCDEQDSGALLGMRQDVLDHIQFLDSFSYNNVFVGEERQILGTKIDYDTPR 103
            +L+ EAR QLDPVD++I +AKWDAIRNIIKT PLAD+KNVI+EL+RQ DE DS  LLG+RQDVLDH+Q+LDSFSYNNVFVGEERQILGTKID+DTPR
Sbjct:   70 RLLREARTQLDPVDQMIEDAKWDAIRNIIKTSPLADVKNVIAELARQSDEDDSALLLGLRQDVLDHVQYLDSFSYNNVFVGEERQILGTKIDFDTPR 166          
BLAST of mRNA_H-paniculata_contig5513.12990.1 vs. uniprot
Match: R7QPP4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPP4_CHOCR)

HSP 1 Score: 96.3 bits (238), Expect = 1.660e-22
Identity = 43/111 (38.74%), Postives = 70/111 (63.06%), Query Frame = 0
Query:    1 GIGLQAKLIGEARRQLDPVDKLITEAKWDAIRNIIKTYPLADMKNVISELSRQCDEQDSGALLGMRQDVLDHIQFLDSFSYNNVFVGEERQILGTKIDYDTPRFGEISVND 111
            G+ L    +   R ++D +D LI  AKWD++R ++ + P+  +K+V ++L     +   GA++G+R+D+   I+ LD+  Y NVF+GE+RQILGTK+DYD P+     V D
Sbjct:   84 GLTLSRTSLQSIRARVDDIDPLIAAAKWDSVRTVLASRPVVGVKDVCNQLLNASSQDAGGAIVGLREDLQSAIRLLDTSVYANVFIGEDRQILGTKVDYDVPKIYLGDVKD 194          
BLAST of mRNA_H-paniculata_contig5513.12990.1 vs. uniprot
Match: A0A1Z5KBF4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBF4_FISSO)

HSP 1 Score: 57.8 bits (138), Expect = 8.960e-8
Identity = 31/84 (36.90%), Postives = 51/84 (60.71%), Query Frame = 0
Query:    9 IGEARRQLDPVDKLITEAKWDAIRNIIKTYPLADM-----KNVISELSRQCDEQ--DSGALLGMRQDVLDHIQFLDSFSYNNVF 85
            I +AR+Q++ V  LI E KWD++R I+ T PLAD      + ++   + Q  +   D  A + +R+D++ H+++LD   YNNVF
Sbjct:   78 IQQARKQMENVPNLIQEEKWDSVRAILITPPLADCWAKTSRPLLKNYADQVGDNGGDELAAIELREDLISHLRYLDMAVYNNVF 161          
BLAST of mRNA_H-paniculata_contig5513.12990.1 vs. uniprot
Match: A0A448YYW4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYW4_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.980e-5
Identity = 31/88 (35.23%), Postives = 51/88 (57.95%), Query Frame = 0
Query:    4 LQAKLIGEARRQLDPVDKLITEAKWDAIRNIIKTYPLADMKNVISELSRQCDEQ------DSGALLGMRQDVLDHIQFLDSFSYNNVF 85
            ++A LI EAR+QL+ V  L+ + K+D +R ++   PL D  +  + + ++  E       D  A L  R+++L H++FLD   YNNVF
Sbjct:  106 IRAVLI-EARKQLETVPALLADEKFDGVRTLLTEAPLRDCWSKTTPILKKYAEALGDTDGDELAALEGREELLQHLRFLDMAVYNNVF 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5513.12990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LG73_ECTSI6.910e-4979.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
R7QPP4_CHOCR1.660e-2238.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1Z5KBF4_FISSO8.960e-836.90Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A448YYW4_9STRA2.980e-535.23Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023222PsbQ-like domain superfamilyGENE3D1.20.120.290coord: 2..92
e-value: 3.2E-7
score: 32.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5513contigH-paniculata_contig5513:5427..6435 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5513.12990.1mRNA_H-paniculata_contig5513.12990.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5513 5427..6435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5513.12990.1 ID=prot_H-paniculata_contig5513.12990.1|Name=mRNA_H-paniculata_contig5513.12990.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
GIGLQAKLIGEARRQLDPVDKLITEAKWDAIRNIIKTYPLADMKNVISEL
SRQCDEQDSGALLGMRQDVLDHIQFLDSFSYNNVFVGEERQILGTKIDYD
TPRFGEISVNDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023222PsbQ-like_dom_sf