prot_H-paniculata_contig5429.12877.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5429.12877.1
Unique Nameprot_H-paniculata_contig5429.12877.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length763
Homology
BLAST of mRNA_H-paniculata_contig5429.12877.1 vs. uniprot
Match: D7FYB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB0_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 3.520e-77
Identity = 271/752 (36.04%), Postives = 392/752 (52.13%), Query Frame = 0
Query:   31 AKKELEVLVGLKAKAIQKLQAESVQSVVAAIELSLEKERAPDSEDVAQIEAYRVARKELKRTLASADIVEVSVALAEGLVLEREGAAL--------KWKRDREEVSSTEGLMAELEPTTQAADAEPVVVAAAFEALWNTEKAESNRRHIELLSEGLEASEIHDLQVLLSSLERQASDKIEDAILFLLVTRS-LRNPRKPSPPPFSHG-TIQETTAPADSRDPEAQWHADVLRQRIAGVSRAVEKKGGWRSAVLVND---EVNIDVDVGPWSPSDGVLMLNMVKSALVVQLEESQAKVQALEE-AIQSSGGGGLVAHLDATADLHRSVTLLWEGVGKVLKATLQVSFSTTTATAERVESPSATQKAATQDNHCCTPTALATNMGFIVNESSLAASSASATE---VVSMLNNQALVQIPMHLEDLPLDIAAEALTNDIDRVRAGGKFLVEGMLALSTLQQQLXXXXXXXXXXXXXXXXRSSAIVSTSPRDSPT-IAPPEQTVEVAPSSPVVQTSGRVSLPPVEEIPPTPDQDTRPSIPESSASEQRDVLDLRIPELELPSRQASSAGPSSEPPTTLRLFDEIDTSQQSDQSGSHPTLLSSRGSSLT-SQSEPSVAGGKVAAGNRDFSEKEEEDAKASGQTKINAAMDRVRAMEETTRGLREVAEERGAVIGLLRREIGELEATLLDAQERRSAWMDEMAPAADPILEGRLDEAMVTLGEEREVLANTTRKLDMAMNEKEHLRLTVEEAKVRVRE 763
            A KEL+ L+  K++A +KL   S++S++ A++L  +K    + +D   IE                 +VEVSVALAE  + +REG AL        + + D   + S E L     P      A         +  WN EKA    R + +LS+ LEAS+IHDLQVL  SL+R+  D +  A+     +RS +          +++  T  E  A A++ D + +W A+VL  R+  V RAVE+KGGWRSAV +     EVN+DVDV PW  +DGVLML  V+ AL VQL ES++KV+ LE+ A       GL  HL+A ADLHR+VTLLWEGVG VLK+  +    T    AE + S   T  +  QD     PTA   +   ++ ++++A+++  A E   ++ ML ++  +++PMHLEDLPL I   AL+ DIDRV A  K++V G+L   +     XXXXXXXXXXX      +     T P+D P  + PP       P++ V      +  P  +E+PP  D D R     SS S Q ++ +    ++ +    A S     E P+T       D+  Q++   S  T  ++    L  + + P++    +     D S+ EE       Q +++ A +R R MEET RGLR+V EER  VI LL+REI +L+  L  A            P  DP LE  L +AMV LGEER  LA+TT+KLD ++ E++ L   V EA ++ R+
Sbjct: 1476 ATKELKGLMEAKSEAAKKLAGTSLESILTAVKLLRKKRTELNKDDRKGIEXXXXXXXXXXXXXXXXXMVEVSVALAEAALHKREGVALLKHHQRRKRQQGDHRRLRSKENLGNVSSPLGNTPAAVDTADEEMVDRCWNDEKAAETERRLAILSKSLEASDIHDLQVLRKSLQRELDD-VGSALRESKPSRSRVETTSAGEGEGYTYSSTAGEEPAAAETTDEDERWKAEVLAHRLDAVERAVERKGGWRSAVFLGKNGGEVNVDVDVEPWPAADGVLMLQTVRDALHVQLMESRSKVEELEDMAALVPSSEGLGGHLEAAADLHRAVTLLWEGVGDVLKS--RAENRTAEPPAEPLSSQELTPMSQVQDKP--RPTASDVSDTSVI-DNAIASTANGAGENDPILMMLQDEEFLEVPMHLEDLPLPIVTNALSVDIDRVTATTKYVVAGVLRQLSAXXXXXXXXXXXXXXXKYSAAEAHQRRGTLPQDPPNPVVPPSAVKASLPAANVP-----LGTPTPQELPP--DDDIR-----SSNSGQEELSEPASEKVSV----AGSEAEIEETPSTEDAGVNNDSGLQAEDDASTSTTRTATSEGLEDTTTSPALPPEPIP--EDDASDHEER----VTQAEVDEAWERAREMEETARGLRDVVEEREGVIDLLQREITDLKTALATADSGSRPSNTVETPFTDPHLEQELQKAMVALGEERAFLADTTQKLDTSLEERDRLLDEVAEANMKERQ 2199          
BLAST of mRNA_H-paniculata_contig5429.12877.1 vs. uniprot
Match: A0A6H5KQR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR0_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 2.820e-68
Identity = 188/461 (40.78%), Postives = 267/461 (57.92%), Query Frame = 0
Query:   31 AKKELEVLVGLKAKAIQKLQAESVQSVVAAIELSLEKERAPDSEDVAQIEAYRVARKELKRTLASADIVEVSVALAEGLVLEREGAAL--------KWKRDREEVSSTEGLMAELEP------TTQAADAEPVVVAAAFEALWNTEKAESNRRHIELLSEGLEASEIHDLQVLLSSLERQASD-----KIEDAILFLLVTRSLRNPRKPSPPPFSHGTIQETTAPADSRDPEAQWHADVLRQRIAGVSRAVEKKGGWRSAVLVND---EVNIDVDVGPWSPSDGVLMLNMVKSALVVQLEESQAKVQALEE-AIQSSGGGGLVAHLDATADLHRSVTLLWEGVGKVLKATLQVSFSTTTATAERVESPSATQKAATQDNHCCTPTALATNMGFI-VNESSLAASSASATE---VVSMLNNQALVQIPMHLEDLPLDIAAEALTNDIDRVRAGGKFLVEGML 464
            A KELE L+  K++  +KL   S++S++ A++L  +K    + +D   IEA +   K L+RTLASAD+VEVSVALAE  + +REGAAL        + + D   + S + L +   P      TT  AD E V         WN EKA    R + +LS+ LEAS+IHDLQ+L  SL+R+  D     +      F + T S     + +   +S    +E  A AD+ D + +W A+VL QR+  + RAVE+KGGWRSAV ++    EVN+DVDV PW  +DGVLML  V+ AL VQL ES++KV+ LE+ A       GL  HL+A ADLHR+VTLLWEGVG VLK+  +        TAE    P ++Q+  T       P   A+++    V ++++A+++ SA E   ++ ML ++  ++IPMHLEDLPL I   A + DIDRV A  K++V G+L
Sbjct: 1242 ATKELEELIESKSEVAKKLAGTSLESILTAVKLLGKKRNELNKDDREGIEANKATEKALERTLASADMVEVSVALAEASLHKREGAALLKHHXXXXRQQGDHGSLRSEKSLGSASSPPGNTPATTGTADEEMVG------RYWNDEKAAETERRLAILSKSLEASDIHDLQILRKSLQRELDDAGSALRESKPSRFRVETTSAGEGEEHT---YSSTAGEEPAAAADTADEDGRWKAEVLAQRVDAIERAVERKGGWRSAVFLDKNGGEVNVDVDVEPWPAADGVLMLQTVRDALNVQLIESRSKVEELEDMAALVPSSEGLEGHLEAAADLHRAVTLLWEGVGDVLKSRAEKR------TAEPPAEPLSSQELTTMSQAQGKPRPTASDVSDTPVIDNAIASTANSAEENDPILKMLQDEEFLEIPMHLEDLPLPIVTNAFSVDIDRVTAITKYVVAGLL 1687          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5429.12877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYB0_ECTSI3.520e-7736.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQR0_9PHAE2.820e-6840.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 300..320
NoneNo IPR availableCOILSCoilCoilcoord: 466..490
NoneNo IPR availableCOILSCoilCoilcoord: 679..699
NoneNo IPR availableCOILSCoilCoilcoord: 733..763

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5429contigH-paniculata_contig5429:364..4666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5429.12877.1mRNA_H-paniculata_contig5429.12877.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5429 364..8600 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5429.12877.1 ID=prot_H-paniculata_contig5429.12877.1|Name=mRNA_H-paniculata_contig5429.12877.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=763bp
MGEMEESRDGEGNIDTCVVAKEAARKVEKAAKKELEVLVGLKAKAIQKLQ
AESVQSVVAAIELSLEKERAPDSEDVAQIEAYRVARKELKRTLASADIVE
VSVALAEGLVLEREGAALKWKRDREEVSSTEGLMAELEPTTQAADAEPVV
VAAAFEALWNTEKAESNRRHIELLSEGLEASEIHDLQVLLSSLERQASDK
IEDAILFLLVTRSLRNPRKPSPPPFSHGTIQETTAPADSRDPEAQWHADV
LRQRIAGVSRAVEKKGGWRSAVLVNDEVNIDVDVGPWSPSDGVLMLNMVK
SALVVQLEESQAKVQALEEAIQSSGGGGLVAHLDATADLHRSVTLLWEGV
GKVLKATLQVSFSTTTATAERVESPSATQKAATQDNHCCTPTALATNMGF
IVNESSLAASSASATEVVSMLNNQALVQIPMHLEDLPLDIAAEALTNDID
RVRAGGKFLVEGMLALSTLQQQLQQQLQHSRQADENAESRSSAIVSTSPR
DSPTIAPPEQTVEVAPSSPVVQTSGRVSLPPVEEIPPTPDQDTRPSIPES
SASEQRDVLDLRIPELELPSRQASSAGPSSEPPTTLRLFDEIDTSQQSDQ
SGSHPTLLSSRGSSLTSQSEPSVAGGKVAAGNRDFSEKEEEDAKASGQTK
INAAMDRVRAMEETTRGLREVAEERGAVIGLLRREIGELEATLLDAQERR
SAWMDEMAPAADPILEGRLDEAMVTLGEEREVLANTTRKLDMAMNEKEHL
RLTVEEAKVRVRE
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