prot_H-paniculata_contig54.12833.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig54.12833.1
Unique Nameprot_H-paniculata_contig54.12833.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length631
Homology
BLAST of mRNA_H-paniculata_contig54.12833.1 vs. uniprot
Match: D7G8K9_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K9_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 8.390e-44
Identity = 129/333 (38.74%), Postives = 167/333 (50.15%), Query Frame = 0
Query:  304 RRSVPVLDWWRSQRLRSTPDGKTVVSVGSSRNELSPPRIMAPPHKIVRPKSAAAHAIAQKQNRPKINGDGTSDSEVPLWTKAQLECLHVAHMGTAPTAKDFWDVVASSVDGKDPSECQQKWFEHFATPKVRRRQAKTKRVSPEELGTP----LAVKTPPSRILGTADYDSVVAPGQPVTAQADPDDLFQATPMRGRRRVRVEPAGSSSGPSTPKTPPGPDTLSEDGGLVLEDNQGNGQDGSKRVVSRAYVQAMSKKMRKVSANP-RNIRGSKSVGRQPP---VKPRRVHATTLSGGRTIRASVASSGVVNVTCA-GSDDNESELSSSCGSDSD 627
            R + PVLDWWRSQRL  TP   +V  VG++R  L  P             S   HA      R K  G   +  E P WTKAQ+  L  A   TAP+   FW  VA +VDG++P ECQQKWFEHFATP+ R R A  +    + +GTP    ++  TP       A Y S+ AP +    +   DDLFQATP+RG RR  V+  G      TP+TP GP     D    L+   G      KR VSR YV+A+SK+MRK +    +N + ++    + P   V  R  H   +SGG  ++  V+ SG V+V     SDD  S +S    SD D
Sbjct:   28 RGAAPVLDWWRSQRLTKTP---SVGVVGAARFPLGQP-------------STGNHADMDSACRLKTVGRDANGEEEP-WTKAQMHSLRRAQAETAPSTSAFWSAVACNVDGRNPQECQQKWFEHFATPRGRSRNASARGCISQRIGTPPSDDMSRNTP-----AAAAYRSL-APAKQTPERGASDDLFQATPIRGHRRFGVQARGDVLDTRTPRTPAGPGAPCRDSS-ALDAAPGCEDADYKRGVSRKYVKALSKRMRKGALQSGKNRKAARGQAIRKPASVVAGRTTHTAAVSGGHKLQVCVSGSGAVSVQSTYNSDDGASSVSDDVESDDD 336          
BLAST of mRNA_H-paniculata_contig54.12833.1 vs. uniprot
Match: A0A7S4DBM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBM9_HETAK)

HSP 1 Score: 82.4 bits (202), Expect = 4.860e-13
Identity = 53/136 (38.97%), Postives = 65/136 (47.79%), Query Frame = 0
Query:  298 KTTLSGRRSVPVLDWWRSQRLRSTPDGKTVVSVGSSRNELSPPRIMAPPHKIVRPKSAAAHAIAQKQNRPKINGDGTSDSEVPLWTKAQLECLHVAHMGTAPTAKDFWDVVASSVDGKDPSECQQKWFEHFATPKV 433
            ++T SGR++  VL+WWR QRL S     T+V+VGS     S  R +   HK                          SD     W+  Q+E L  AH  T P   DFW  VA  VDGK+ SEC  KWFE +ATPKV
Sbjct:   33 RSTRSGRKTTSVLEWWRGQRLVSGVQD-TLVAVGSE----STVRFL---HK--------------------------SDDRSKRWSHVQIEQLQHAHSTTDPLVGDFWKKVAKHVDGKNDSECHDKWFEQYATPKV 134          
BLAST of mRNA_H-paniculata_contig54.12833.1 vs. uniprot
Match: A0A835YWZ7_9STRA (Myb-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.470e-5
Identity = 78/282 (27.66%), Postives = 106/282 (37.59%), Query Frame = 0
Query:  300 TLSGRRSVPVLDWWRSQRLRSTPDGKTVVSVGSSRNELSPPRIMAPPHKIVRPKSAAAHAIAQKQNRPKINGDGTSDSEVPLWTKAQLECLHVAHMGTAPTAKDFWDVVASSVDGKDPSECQQKWF----EHF--ATPKVRRRQAKTKRVSPEELG-TPLAVKTPPSRILGTADYDS---------VVAPGQPVTAQADP-DDLFQATP-MRGRRRVRVEPAGSSSGP-----STPKTPPGPDTLSEDGGLVLEDNQGNGQDGSKRVVSRAYVQAMSKKMRK 558
            T SGR+ VPVL+WWRSQRL   PD                                              NGD         WT+ Q   L  A + T P   +FW  VA  V GK   +C Q+WF    EH   A    +  QA TKR   +    TP A   P +    TA   S           A    +++QA   DD+FQ +   +G+++ ++   G  S P     +T  TP       + G       Q          VS++Y+ A+SK+MRK
Sbjct:  538 TRSGRKRVPVLEWWRSQRLSVGPDS---------------------------------------------NGDE--------WTEQQEALLQQAQLRTDPGHANFWVQVAKGVPGKSAGQCSQRWFAQLEEHNDGAGGTSKGNQAGTKRKRGKSAAATPSAQDKPAASAAKTAQAASKGGKRGQTRAAAIASYLSSQAGHMDDVFQDSGGAQGKKKRKLSVPGVVSLPPNTLGATVPTPKAQGKTGKAGKSPANARQSQASGN----VSKSYMVAVSKRMRK 762          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54.12833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8K9_ECTSI8.390e-4438.74Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S4DBM9_HETAK4.860e-1338.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YWZ7_9STRA3.470e-527.66Myb-like domain-containing protein n=1 Tax=Tribone... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 374..443
e-value: 3.6E-8
score: 35.2
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 381..428

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig54contigH-paniculata_contig54:20684..22576 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig54.12833.1mRNA_H-paniculata_contig54.12833.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig54 20042..22691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig54.12833.1 ID=prot_H-paniculata_contig54.12833.1|Name=mRNA_H-paniculata_contig54.12833.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=631bp
MADHDPLGSAAVAHHVQYGTVRSPVPQMLPRAQSLGCPIPVYANAFGART
FCRAKSLPPPTKLDTSRSSISAGEVLGRNRRSVEAFRAASVCEDAQHRFL
ELCNARPLSEMFVSSMIPIFAAESREEGSSVGKCCPPACSDVEDRRSPRK
YEAHSTRSSSPDAKMNIDDTNDSPENTVNCCKNQRIPSPPGTIDTAGPSE
CQRNTTGMKPKSDITVPSTACRKKGGGLLVPTRKEDRTLGMMNTLHRAGG
EELNVTKRATSSRARGVGPQNSVCGTARARVGGQSKAASNNVDTNVWKTT
LSGRRSVPVLDWWRSQRLRSTPDGKTVVSVGSSRNELSPPRIMAPPHKIV
RPKSAAAHAIAQKQNRPKINGDGTSDSEVPLWTKAQLECLHVAHMGTAPT
AKDFWDVVASSVDGKDPSECQQKWFEHFATPKVRRRQAKTKRVSPEELGT
PLAVKTPPSRILGTADYDSVVAPGQPVTAQADPDDLFQATPMRGRRRVRV
EPAGSSSGPSTPKTPPGPDTLSEDGGLVLEDNQGNGQDGSKRVVSRAYVQ
AMSKKMRKVSANPRNIRGSKSVGRQPPVKPRRVHATTLSGGRTIRASVAS
SGVVNVTCAGSDDNESELSSSCGSDSDSDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf