prot_H-paniculata_contig5368.12789.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5368.12789.1
Unique Name	prot_H-paniculata_contig5368.12789.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	183

Homology

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BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot
Match: D7G245_ECTSI (Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G245_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 8.190e-121
Identity = 173/182 (95.05%), Postives = 176/182 (96.70%), Query Frame = 0

Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDKAGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLETSAKTKVGVRQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPYQGGGGFCCG 182
            MLRFTDDTFD+HLQSTIGVDFKVKM+D  GKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLE SAKTKVGV+QVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNP Q GGG CCG
Sbjct:   29 MLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPNQAGGGLCCG 210

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BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot
Match: A0A835YPZ0_9STRA (Rab18, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ0_9STRA)

HSP 1 Score: 273 bits (699), Expect = 3.860e-91
Identity = 141/183 (77.05%), Postives = 157/183 (85.79%), Query Frame = 0

Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDKAGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLETSAKTKVGVRQVFEEVVQKILDNPSLLANTAPGRPRDTVD--PSRPNPYQGGGGFCC 181
            MLRFTDD+FD+ LQSTIGVDFKVKM++   K+IKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDV RPETFDNL+KWLEEVETYHPGRGR+VVKLLVGNKVD  R V R QAE +ARSKGMLFLE SAKT+VG+RQ FEEVV KIL++P+LLANT PG+PR TVD   ++  P  G GG  C
Sbjct:   27 MLRFTDDSFDDKLQSTIGVDFKVKMMEVGDKKIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVERPETFDNLNKWLEEVETYHPGRGRDVVKLLVGNKVDCPRAVPREQAEAWARSKGMLFLEASAKTEVGIRQAFEEVVHKILESPALLANTTPGKPR-TVDLAATQNTPPSGAGGCGC 208

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BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot
Match: A0A067C8B0_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C8B0_SAPPC)

HSP 1 Score: 264 bits (674), Expect = 2.730e-87
Identity = 133/183 (72.68%), Postives = 152/183 (83.06%), Query Frame = 0

Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDKAGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLETSAKTKVGVRQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPN--PYQGGGGFCC 181
            +LRFTDDTFD+HLQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R ETF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R + E +ARSKGMLF+E+SAKTK+G++QVF EVVQKILDNP+LLANTAP      V+ S     P+   GG CC
Sbjct:   29 LLRFTDDTFDDHLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVARKETFENLGTWLQEVEVYSPANGRDVVKLLVGNKIDKERVVSRQEGEAWARSKGMLFVESSAKTKIGIQQVFNEVVQKILDNPALLANTAPRSRAKKVNLSADKYAPHANAGGGCC 211

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BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot
Match: A0A4D9D7L4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7L4_9STRA)

HSP 1 Score: 263 bits (671), Expect = 6.820e-87
Identity = 133/181 (73.48%), Postives = 152/181 (83.98%), Query Frame = 0

Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDKAGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLETSAKTKVGVRQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPYQGGGGFCC 181
            +LRFTDD FD+H QSTIGVDFKVKM++   KRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R E+F+NL+ WL+EVE Y  G GRE+VK+LVGNKVDKER+V R +AE +ARSKGMLFLE SAKT+ G+RQVF EVVQKILDNPSLL NTAPGRPR  V+       +G GG+CC
Sbjct:   29 LLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNHWLQEVEVYSTGGGREIVKVLVGNKVDKERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTNTAPGRPR--VNLQADAAAKGSGGYCC 207

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BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot
Match: K3WMM1_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WMM1_GLOUD)

HSP 1 Score: 257 bits (657), Expect = 8.040e-85
Identity = 129/181 (71.27%), Postives = 152/181 (83.98%), Query Frame = 0

Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDKAGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLETSAKTKVGVRQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPYQGGGGFCC 181
            +LRFTDDTFD++LQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  G++VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EVVQKIL+NP+LL  T P R  D    S  +   GGGG CC
Sbjct:   24 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGKDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLGTTRP-RTNDRATLSGKDGKSGGGGGCC 203

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BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot
Match: D0NMU9_PHYIT (Rab18 family GTPase, putative n=6 Tax=Oomycota TaxID=4762 RepID=D0NMU9_PHYIT)

HSP 1 Score: 256 bits (653), Expect = 3.160e-84
Identity = 128/181 (70.72%), Postives = 152/181 (83.98%), Query Frame = 0

Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDKAGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLETSAKTKVGVRQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPYQGGGGFCC 181
            +LRFTDDTFD++LQSTIGVDFKVKM+   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EVVQKIL+NP+LL+NTAP      +D        GGG  CC
Sbjct:   24 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRSRGRKLDAKAEK--SGGGNGCC 202

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BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot
Match: A0A6A3N672_9STRA (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3N672_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.200e-83
Identity = 128/181 (70.72%), Postives = 152/181 (83.98%), Query Frame = 0

Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDKAGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLETSAKTKVGVRQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPYQGGGGFCC 181
            +LRFTDDTFD++LQSTIGVDFKVKM+   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EVVQKIL+NP+LL+NTAP      +D        GGG  CC
Sbjct:   64 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRNRGRKLDGKAEK--SGGGSGCC 242

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BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot
Match: A0A6G0KMK3_9STRA (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A6G0KMK3_9STRA)

HSP 1 Score: 256 bits (653), Expect = 2.090e-83
Identity = 128/181 (70.72%), Postives = 152/181 (83.98%), Query Frame = 0

Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDKAGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLETSAKTKVGVRQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPYQGGGGFCC 181
            +LRFTDDTFD++LQSTIGVDFKVKM+   GK+IKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R +AE++ARSKGMLF+E+SAKTK+G++QVF EVVQKIL+NP+LL+NTAP      +D        GGG  CC
Sbjct:   81 LLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDLWLQEVEVYSPAGGRDVVKLLVGNKIDKERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTAPRNRGRKLDGKAEK--SGGGSGCC 259

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BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot
Match: A0A024TX33_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TX33_9STRA)

HSP 1 Score: 252 bits (643), Expect = 2.190e-82
Identity = 128/181 (70.72%), Postives = 148/181 (81.77%), Query Frame = 0

Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDKAGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLETSAKTKVGVRQVFEEVVQKILDNPSLLANTAPGRPRDTVDPSRPNPYQGGGGFCC 181
            +LRFT+DTFD+HLQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF NL  WL+EVE Y P  GR+VVKLLVGNK+DKERVV+R + E +ARSKGMLF+E+SAKTK G++QVF EVVQKILDNP+LL+NTAP      +D +   P    G  CC
Sbjct:   46 LLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFANLDTWLQEVEVYSPANGRDVVKLLVGNKIDKERVVSRREGEAWARSKGMLFVESSAKTKTGIQQVFNEVVQKILDNPTLLSNTAPKSRVAKLDLADARPAASSG--CC 224

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BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot
Match: A0A485LUC0_9STRA (Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LUC0_9STRA)

HSP 1 Score: 251 bits (640), Expect = 3.790e-82
Identity = 122/166 (73.49%), Postives = 143/166 (86.14%), Query Frame = 0

Query:    1 MLRFTDDTFDEHLQSTIGVDFKVKMLDKAGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGNKVDKERVVTRAQAEEYARSKGMLFLETSAKTKVGVRQVFEEVVQKILDNPSLLANTAPGRPRDTVD 166
            +LRFT+DTFD+HLQSTIGVDFKVKM+   GKRIKMTIWDTAGQERFRTLTSSYYRGAQGI+LVYDV R +TF+NL  WL+EV+ Y P  GR+VVKLLVGNK+DKER V+R + E +AR+KGMLF+E+SAKTK G++QVF EVVQKILDNPSLL+NTAP      +D
Sbjct:   29 LLRFTEDTFDDHLQSTIGVDFKVKMITVDGKRIKMTIWDTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENLDTWLQEVQVYSPANGRDVVKLLVGNKIDKERAVSRKEGEAWARTKGMLFVESSAKTKTGIQQVFNEVVQKILDNPSLLSNTAPKSRAKKID 194

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5368.12789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G245_ECTSI	8.190e-121	95.05	Rab18, RAB family GTPase n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835YPZ0_9STRA	3.860e-91	77.05	Rab18, rab family GTPase n=1 Tax=Tribonema minus T...	[more]
A0A067C8B0_SAPPC	2.730e-87	72.68	Uncharacterized protein n=4 Tax=Saprolegniaceae Ta...	[more]
A0A4D9D7L4_9STRA	6.820e-87	73.48	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
K3WMM1_GLOUD	8.040e-85	71.27	Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4...	[more]
D0NMU9_PHYIT	3.160e-84	70.72	Rab18 family GTPase, putative n=6 Tax=Oomycota Tax...	[more]
A0A6A3N672_9STRA	1.200e-83	70.72	Uncharacterized protein n=21 Tax=Peronosporaceae T...	[more]
A0A6G0KMK3_9STRA	2.090e-83	70.72	Uncharacterized protein n=4 Tax=Peronosporaceae Ta...	[more]
A0A024TX33_9STRA	2.190e-82	70.72	Uncharacterized protein n=2 Tax=Aphanomyces TaxID=...	[more]
A0A485LUC0_9STRA	3.790e-82	73.49	Aste57867_25090 protein n=2 Tax=Aphanomyces TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 8..24 score: 33.83 coord: 124..146 score: 40.31 coord: 26..48 score: 47.76 coord: 91..104 score: 45.47
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 1..179 e-value: 0.0036 score: -3.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 2..149 e-value: 6.1E-10 score: 25.9
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..149 e-value: 9.2E-74 score: 261.0
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 1..149 e-value: 2.5E-10 score: 13.0
None	No IPR available	GENE3D	3.40.50.300		coord: 1..160 e-value: 9.0E-54 score: 183.7
None	No IPR available	PANTHER	PTHR24073:SF1064		coord: 1..169
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 1..169
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..181 score: 30.464
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 3..142 e-value: 8.6E-20 score: 69.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 1..147 e-value: 5.0E-49 score: 166.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5368	contig	H-paniculata_contig5368:168..7005 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5368.12789.1	mRNA_H-paniculata_contig5368.12789.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5368 159..8524 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5368.12789.1 ID=prot_H-paniculata_contig5368.12789.1|Name=mRNA_H-paniculata_contig5368.12789.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=183bp
MLRFTDDTFDEHLQSTIGVDFKVKMLDKAGKRIKMTIWDTAGQERFRTLT
SSYYRGAQGIMLVYDVTRPETFDNLSKWLEEVETYHPGRGREVVKLLVGN
KVDKERVVTRAQAEEYARSKGMLFLETSAKTKVGVRQVFEEVVQKILDNP
SLLANTAPGRPRDTVDPSRPNPYQGGGGFCCG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase