prot_H-paniculata_contig53228.12731.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig53228.12731.1 vs. uniprot
Match: A0A1J3GHI3_NOCCA (Uncharacterized protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3GHI3_NOCCA) HSP 1 Score: 48.9 bits (115), Expect = 5.620e-6 Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0
Query: 1 NPAI-NNGNTWVADSGASNHMTNNLATMYDIRKPVTGEDVVMLGDGSILVVDLVGKLDL 58
NPA+ ++ +TW+ DSGAS+HMT++LA + + P +G D V+LGD S L + G +
Sbjct: 18 NPAMMSDSSTWLVDSGASHHMTSDLANL-SLHSPYSGGDDVLLGDNSALQISHTGSFSI 75
BLAST of mRNA_H-paniculata_contig53228.12731.1 vs. uniprot
Match: A0A1J3H344_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3H344_NOCCA) HSP 1 Score: 51.2 bits (121), Expect = 6.950e-6 Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 0
Query: 8 NTWVADSGASNHMTNNLATMYDIRKPVTGEDVVMLGDGSILVVDLVGKLDLIFHS 62
N W+ DSGA++HMT++L + +P TG D V++GDGS L + G L L HS
Sbjct: 48 NAWLMDSGATHHMTSDLHHL-STNQPYTGNDAVLIGDGSGLSITHTGSLSLPSHS 101
BLAST of mRNA_H-paniculata_contig53228.12731.1 vs. uniprot
Match: A0A0D3AH29_BRAOL (Uncharacterized protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3AH29_BRAOL) HSP 1 Score: 47.8 bits (112), Expect = 1.120e-5 Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query: 9 TWVADSGASNHMTNNLATMYDIRKPVTGEDVVMLGDGSILVVDLVGKLDL 58
TW+ DSGAS+HMT++LA + + P G D V+LGDGS L + G L
Sbjct: 8 TWLLDSGASHHMTSDLANL-SLHAPYNGGDDVILGDGSGLNISHTGSFSL 56
BLAST of mRNA_H-paniculata_contig53228.12731.1 vs. uniprot
Match: A0A803PZP0_CANSA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803PZP0_CANSA) HSP 1 Score: 48.5 bits (114), Expect = 6.560e-5 Identity = 24/58 (41.38%), Postives = 39/58 (67.24%), Query Frame = 0
Query: 1 NPAINNGNTWVADSGASNHMTNNLATMYDIRKPVTGEDVVMLGDGSILVVDLVGKLDL 58
NP + + W ADSGASNH+T+++A + ++P G++ V++GDGS L + VG +L
Sbjct: 190 NPEVLESDAWFADSGASNHITSDVAALSQ-KQPYGGKEKVIVGDGSKLSISHVGSGNL 246
BLAST of mRNA_H-paniculata_contig53228.12731.1 vs. uniprot
Match: UPI0006AB0873 (uncharacterized protein LOC106385917 n=2 Tax=Brassica napus TaxID=3708 RepID=UPI0006AB0873) HSP 1 Score: 48.1 bits (113), Expect = 8.790e-5 Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 0
Query: 1 NPAINNG--NTWVADSGASNHMTNNLATMYDIRKPVTGEDVVMLGDGSILVVDLVGK 55
N A+ NG NTW+ DSGAS+HMT+++A + + P G D V+LGDGS L + G+
Sbjct: 335 NVAMMNGDANTWLLDSGASHHMTSDIANL-SLHTPYNGGDDVILGDGSGLNISHTGQ 390
BLAST of mRNA_H-paniculata_contig53228.12731.1 vs. uniprot
Match: A0A6D2I5L4_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2I5L4_9BRAS) HSP 1 Score: 48.1 bits (113), Expect = 9.030e-5 Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0
Query: 10 WVADSGASNHMTNNLATMYDIRKPVTGEDVVMLGDGSILVVDLVGK 55
WV DSGA++HMT++L + + +P TGED V++GDGS L + +G
Sbjct: 274 WVMDSGATHHMTSDLQNLA-LHQPYTGEDNVLIGDGSGLSITHIGS 318 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53228.12731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig53228.12731.1 ID=prot_H-paniculata_contig53228.12731.1|Name=mRNA_H-paniculata_contig53228.12731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bpback to top |