prot_H-paniculata_contig53180.12723.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53180.12723.1
Unique Nameprot_H-paniculata_contig53180.12723.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length56
Homology
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BLAST of mRNA_H-paniculata_contig53180.12723.1 vs. uniprot
Match: A0A6H5K0G0_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G0_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 2.720e-14
Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0 
Query:    3 KRPYAIGAGSYLDPIFKEQTLVRPGILSAIMRQRYAILWTDTDIVWLGNPLPLL 56
            +R  A+ AG + D IFK +T+VRP IL +IM Q Y +LWTD DIVWLGNPLPLL
Sbjct: 1279 ERHRAVKAGQWGDEIFKHETVVRPDILLSIMAQGYKVLWTDVDIVWLGNPLPLL 1332
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53180.12723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0G0_9PHAE2.720e-1462.96Nucleotid_trans domain-containing protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005069Nucleotide-diphospho-sugar transferasePFAMPF03407Nucleotid_transcoord: 17..56
e-value: 2.3E-6
score: 27.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53180contigH-paniculata_contig53180:499..666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53180.12723.1mRNA_H-paniculata_contig53180.12723.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53180 499..666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53180.12723.1 ID=prot_H-paniculata_contig53180.12723.1|Name=mRNA_H-paniculata_contig53180.12723.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp
MQKRPYAIGAGSYLDPIFKEQTLVRPGILSAIMRQRYAILWTDTDIVWLG
NPLPLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005069Nucl-diP-sugar_transferase