prot_H-paniculata_contig52506.12623.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig52506.12623.1
Unique Nameprot_H-paniculata_contig52506.12623.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
BLAST of mRNA_H-paniculata_contig52506.12623.1 vs. uniprot
Match: D7FJW7_ECTSI (ENDO3c domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW7_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.550e-13
Identity = 32/50 (64.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:   23 QAKSKYIREGAALILRRHGGKVPRRKSDILALPGVGPALGQILVAVFDAW 72
            +AK+K+IRE A++I+RRH G VPRR++++LALPGVGPAL +IL+ VFD+W
Sbjct:  162 KAKAKHIRESASIIVRRHRGVVPRRRAELLALPGVGPALVEILLNVFDSW 211          
BLAST of mRNA_H-paniculata_contig52506.12623.1 vs. uniprot
Match: A0A6H5L0N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N6_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 3.250e-13
Identity = 32/49 (65.31%), Postives = 43/49 (87.76%), Query Frame = 0
Query:   24 AKSKYIREGAALILRRHGGKVPRRKSDILALPGVGPALGQILVAVFDAW 72
            AK+K+IRE A +I+RRH G VPRR++++LALPGVGPAL +IL+ VFD+W
Sbjct:  111 AKAKHIRESAGIIVRRHRGVVPRRRAELLALPGVGPALVEILLNVFDSW 159          
BLAST of mRNA_H-paniculata_contig52506.12623.1 vs. uniprot
Match: UPI000A2B011D (endonuclease III-like protein 1 isoform X5 n=1 Tax=Sus scrofa TaxID=9823 RepID=UPI000A2B011D)

HSP 1 Score: 52.8 bits (125), Expect = 2.680e-6
Identity = 24/72 (33.33%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    1 VWDSHPLKRRNVLFTCPCSSARQAKSKYIREGAALILRRHGGKVPRRKSDILALPGVGPALGQILVAVFDAW 72
            V+   P + + +    P     Q+K KYI++ +A++ +R+GG +P    +++ALPGVGP +  + +AV  AW
Sbjct:  203 VYSQRPRRAQALPSGAPAGHRVQSKVKYIKQTSAILQQRYGGDIPASVPELVALPGVGPKMAHLAMAV--AW 272          
BLAST of mRNA_H-paniculata_contig52506.12623.1 vs. uniprot
Match: F1RFB3_PIG (Endonuclease III-like protein 1 n=11 Tax=Suidae TaxID=9821 RepID=F1RFB3_PIG)

HSP 1 Score: 52.8 bits (125), Expect = 2.750e-6
Identity = 24/72 (33.33%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    1 VWDSHPLKRRNVLFTCPCSSARQAKSKYIREGAALILRRHGGKVPRRKSDILALPGVGPALGQILVAVFDAW 72
            V+   P + + +    P     Q+K KYI++ +A++ +R+GG +P    +++ALPGVGP +  + +AV  AW
Sbjct:  193 VYSQRPRRAQALPSGAPAGHRVQSKVKYIKQTSAILQQRYGGDIPASVPELVALPGVGPKMAHLAMAV--AW 262          
BLAST of mRNA_H-paniculata_contig52506.12623.1 vs. uniprot
Match: A0A7S1NPD5_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NPD5_9EUGL)

HSP 1 Score: 50.4 bits (119), Expect = 6.530e-6
Identity = 20/46 (43.48%), Postives = 35/46 (76.09%), Query Frame = 0
Query:   23 QAKSKYIREGAALILRRHGGKVPRRKSDILALPGVGPALGQILVAV 68
            ++K+KYI+E AA++  RHG +VP    +++ALPGVGP +  ++++V
Sbjct:   42 RSKAKYIKEAAAVLQSRHGSRVPSTLKELVALPGVGPKVANLVLSV 87          
BLAST of mRNA_H-paniculata_contig52506.12623.1 vs. uniprot
Match: UPI0006433EFA (endonuclease III-like protein 1 n=1 Tax=Condylura cristata TaxID=143302 RepID=UPI0006433EFA)

HSP 1 Score: 48.5 bits (114), Expect = 8.660e-5
Identity = 21/50 (42.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:   23 QAKSKYIREGAALILRRHGGKVPRRKSDILALPGVGPALGQILVAVFDAW 72
            ++K KYI++  A++ +R+GG +P   S+++ALPGVGP +  + +AV  AW
Sbjct:  197 RSKVKYIKQTTAILQQRYGGDIPASVSELVALPGVGPKMAHLAMAV--AW 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52506.12623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FJW7_ECTSI1.550e-1364.00ENDO3c domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L0N6_9PHAE3.250e-1365.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000A2B011D2.680e-633.33endonuclease III-like protein 1 isoform X5 n=1 Tax... [more]
F1RFB3_PIG2.750e-633.33Endonuclease III-like protein 1 n=11 Tax=Suidae Ta... [more]
A0A7S1NPD5_9EUGL6.530e-643.48Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
UPI0006433EFA8.660e-542.00endonuclease III-like protein 1 n=1 Tax=Condylura ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.30coord: 15..70
e-value: 4.4E-7
score: 32.2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..72
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 23..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig52506contigH-paniculata_contig52506:99..314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig52506.12623.1mRNA_H-paniculata_contig52506.12623.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig52506 99..314 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig52506.12623.1 ID=prot_H-paniculata_contig52506.12623.1|Name=mRNA_H-paniculata_contig52506.12623.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
VWDSHPLKRRNVLFTCPCSSARQAKSKYIREGAALILRRHGGKVPRRKSD
ILALPGVGPALGQILVAVFDAW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011257DNA_glycosylase