prot_H-paniculata_contig5242.12612.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5242.12612.1
Unique Nameprot_H-paniculata_contig5242.12612.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length123
Homology
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BLAST of mRNA_H-paniculata_contig5242.12612.1 vs. uniprot
Match: D7FKB4_ECTSI (B30.2/SPRY domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB4_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 2.360e-24
Identity = 58/124 (46.77%), Postives = 78/124 (62.90%), Query Frame = 0 
Query:    1 MCKADHSSTDSGSGGSGSGVLGRMLHLKGRMPSSSNGAADGGAASAGEKGASS-----PSIPPLLRLVTSDVLTEACCLLDAKSLATGATVCRAMKEVCQGFYPWRLLCCREWGLLEEGEKGQG 119
            MCKA       G G +  G+L RM  L+G MP+     A G A +  ++G  +     P +PP+LRL+++DVLTEAC LLD +SLAT A  CR+ ++VCQG YPWR LCCREW L +  E+ +G
Sbjct:    1 MCKA-------GQGKADGGILSRMRQLQGDMPADEGEGASGVAGAKEDEGDGAAALPPPLLPPVLRLLSADVLTEACTLLDPRSLATAAAACRSFRDVCQGAYPWRGLCCREWELSDATEEEEG 117
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5242.12612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKB4_ECTSI2.360e-2446.77B30.2/SPRY domain-containing protein n=2 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 59..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5242contigH-paniculata_contig5242:6060..10190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5242.12612.1mRNA_H-paniculata_contig5242.12612.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5242 5767..10190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5242.12612.1 ID=prot_H-paniculata_contig5242.12612.1|Name=mRNA_H-paniculata_contig5242.12612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=123bp
MCKADHSSTDSGSGGSGSGVLGRMLHLKGRMPSSSNGAADGGAASAGEKG
ASSPSIPPLLRLVTSDVLTEACCLLDAKSLATGATVCRAMKEVCQGFYPW
RLLCCREWGLLEEGEKGQGSPNE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf