prot_H-paniculata_contig5176.12510.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5176.12510.1
Unique Nameprot_H-paniculata_contig5176.12510.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length59
Homology
BLAST of mRNA_H-paniculata_contig5176.12510.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 3.640e-10
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0
Query:   15 KEIRKQNTFLTFVDLKKAYDTVPHEAFFGKLHHYGVRGRMLGFIR 59
            ++ R+++ +L FVDLKKAYDTVP EA F KL  YGVRG ML FIR
Sbjct:  640 RKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIR 684          
BLAST of mRNA_H-paniculata_contig5176.12510.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM)

HSP 1 Score: 55.1 bits (131), Expect = 2.600e-7
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   12 LPEKEIRKQNTFLTFVDLKKAYDTVPHEAFFGKLHHYGVRGRMLGFIR 59
            L  ++I +  ++L F+DLKKAYDTVPH A F KL   GVRG+ L FI+
Sbjct:  831 LRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQ 878          
BLAST of mRNA_H-paniculata_contig5176.12510.1 vs. uniprot
Match: T1BBI0_9ZZZZ (RNA-directed DNA polymerase (Reverse transcriptase) domain protein (Fragment) n=1 Tax=mine drainage metagenome TaxID=410659 RepID=T1BBI0_9ZZZZ)

HSP 1 Score: 52.8 bits (125), Expect = 5.560e-7
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0
Query:   22 TFLTFVDLKKAYDTVPHEAFFGKLHHYGVRGRMLGFIR 59
            TF+ F+DL KAYD+VPHEA   K+  +G+RGR L +IR
Sbjct:   96 TFICFIDLNKAYDSVPHEACLKKIEDFGIRGRALSWIR 133          
BLAST of mRNA_H-paniculata_contig5176.12510.1 vs. uniprot
Match: A0A2R5FKX6_9STRA (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FKX6_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 8.080e-6
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0
Query:   15 KEIRKQNTFLTFVDLKKAYDTVPHEAFFGKLHHYGVRGRMLGFIR 59
            + I K++  L F+D+KKAYD+VPH A F KL   GVRG +L F++
Sbjct:   16 RRIEKRDIVLLFIDVKKAYDSVPHGALFFKLAKAGVRGPILAFVK 60          
BLAST of mRNA_H-paniculata_contig5176.12510.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 50.4 bits (119), Expect = 1.110e-5
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0
Query:   22 TFLTFVDLKKAYDTVPHEAFFGKLHHYGVRGRMLGFIR 59
            T+  F+DL+KAYDT+PHE  F KL   G+ G ML F++
Sbjct:  542 TYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLK 579          
BLAST of mRNA_H-paniculata_contig5176.12510.1 vs. uniprot
Match: A0A5N5Q8K6_9AGAM (Reverse transcriptase n=1 Tax=Ceratobasidium theobromae TaxID=1582974 RepID=A0A5N5Q8K6_9AGAM)

HSP 1 Score: 50.4 bits (119), Expect = 1.110e-5
Identity = 23/43 (53.49%), Postives = 28/43 (65.12%), Query Frame = 0
Query:   17 IRKQNTFLTFVDLKKAYDTVPHEAFFGKLHHYGVRGRMLGFIR 59
            I  Q TF  F+D KKA+D V HEA +  L H GVRG+ L FI+
Sbjct:  505 INNQTTFGVFIDFKKAFDKVHHEALYRLLDHIGVRGKALNFIK 547          
BLAST of mRNA_H-paniculata_contig5176.12510.1 vs. uniprot
Match: A0A074REN7_9AGAM (Reverse transcriptase (Fragment) n=1 Tax=Rhizoctonia solani 123E TaxID=1423351 RepID=A0A074REN7_9AGAM)

HSP 1 Score: 49.3 bits (116), Expect = 2.760e-5
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   16 EIRKQNTFLTFVDLKKAYDTVPHEAFFGKLHHYGVRGRMLGFIR 59
            +++   TF  FVD KKA+D V HEA +  L H GVRG+ L FIR
Sbjct:  158 KVKPTATFAVFVDFKKAFDKVHHEALYRILDHIGVRGKALEFIR 201          
BLAST of mRNA_H-paniculata_contig5176.12510.1 vs. uniprot
Match: A0A0L6V0N7_9BASI (Reverse transcriptase domain-containing protein n=1 Tax=Puccinia sorghi TaxID=27349 RepID=A0A0L6V0N7_9BASI)

HSP 1 Score: 47.8 bits (112), Expect = 8.730e-5
Identity = 19/40 (47.50%), Postives = 27/40 (67.50%), Query Frame = 0
Query:   20 QNTFLTFVDLKKAYDTVPHEAFFGKLHHYGVRGRMLGFIR 59
            QNTF+ FVD KKA+D VPHE  + +LH  G+   ++  I+
Sbjct:   35 QNTFVIFVDFKKAFDRVPHEGLWARLHQTGIHKDLISIIK 74          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5176.12510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE3.640e-1064.44Reverse transcriptase domain-containing protein n=... [more]
A0A3M2C3P5_9GAMM2.600e-754.17Reverse transcriptase domain-containing protein n=... [more]
T1BBI0_9ZZZZ5.560e-757.89RNA-directed DNA polymerase (Reverse transcriptase... [more]
A0A2R5FKX6_9STRA8.080e-651.11Retrovirus-related Pol polyprotein from type-1 ret... [more]
A0A7S1SJ55_9CHLO1.110e-552.63Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A5N5Q8K6_9AGAM1.110e-553.49Reverse transcriptase n=1 Tax=Ceratobasidium theob... [more]
A0A074REN7_9AGAM2.760e-552.27Reverse transcriptase (Fragment) n=1 Tax=Rhizocton... [more]
A0A0L6V0N7_9BASI8.730e-547.50Reverse transcriptase domain-containing protein n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..59
score: 8.753

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5176contigH-paniculata_contig5176:796..972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5176.12510.1mRNA_H-paniculata_contig5176.12510.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5176 790..972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5176.12510.1 ID=prot_H-paniculata_contig5176.12510.1|Name=mRNA_H-paniculata_contig5176.12510.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=59bp
MYSTSRMPTRDLPEKEIRKQNTFLTFVDLKKAYDTVPHEAFFGKLHHYGV
RGRMLGFIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom