prot_H-paniculata_contig4910.12077.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4910.12077.1
Unique Nameprot_H-paniculata_contig4910.12077.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length111
Homology
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BLAST of mRNA_H-paniculata_contig4910.12077.1 vs. uniprot
Match: D7FZ75_ECTSI (HECT-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ75_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.450e-59
Identity = 99/111 (89.19%), Postives = 104/111 (93.69%), Query Frame = 0 
Query:    1 LLVIFQSRPDVDQQIAVLHELNTALTMASGHPSQNRVGGVIQALVPLLSGVNNEVVLLAIRALITCIDITPRAATSLVESGAVKPMCRRLLKIQDMDVAEACLKCLHLLSK 111
            LL + Q+RP VDQQIAVLHELNT+LTMASGHPSQNRVGGVIQ LVPLLSG NNEVVLLAIRALITCIDITPRAA SLV SGAVKPMC+RLL+IQDMDVAEACLKCLHLLSK
Sbjct:    7 LLHVLQARPGVDQQIAVLHELNTSLTMASGHPSQNRVGGVIQTLVPLLSGANNEVVLLAIRALITCIDITPRAAGSLVASGAVKPMCKRLLQIQDMDVAEACLKCLHLLSK 117
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4910.12077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZ75_ECTSI1.450e-5989.19HECT-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..111
e-value: 2.8E-9
score: 38.1
NoneNo IPR availablePANTHERPTHR45670FAMILY NOT NAMEDcoord: 11..110
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 8..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4910contigH-paniculata_contig4910:124..860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4910.12077.1mRNA_H-paniculata_contig4910.12077.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4910 124..860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4910.12077.1 ID=prot_H-paniculata_contig4910.12077.1|Name=mRNA_H-paniculata_contig4910.12077.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
LLVIFQSRPDVDQQIAVLHELNTALTMASGHPSQNRVGGVIQALVPLLSG
VNNEVVLLAIRALITCIDITPRAATSLVESGAVKPMCRRLLKIQDMDVAE
ACLKCLHLLSK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold