prot_H-paniculata_contig4909.12076.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4909.12076.1
Unique Nameprot_H-paniculata_contig4909.12076.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length369
Homology
BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: D7FTY3_ECTSI (S5 DRBM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY3_ECTSI)

HSP 1 Score: 317 bits (812), Expect = 6.090e-103
Identity = 165/270 (61.11%), Postives = 204/270 (75.56%), Query Frame = 0
Query:   96 LSMTDEDKPDFFDLADLIMSGMSYKDAVRGTDFDDLDADADTQIEEAKRRMALLREDSLEEYLLEKGEADLVNEANAVEIKRRKRLEKMEVNKPAPAPEH----VEMAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHR 361
            +SMTD+DKPD  DLADLIMSG SY++AV+GT+FD LD +   + EE+ RR+  LRE+ LEEYL E GE DL+++  A+  +        + + PAP  +     VEMAQG WAE+LVH+DRV KTVKGGME+ YRALV VGNL+GVGGFA+GKA+ PA A+ EASRKAKL  NLVYV+RYKQA L  D++GKHNG K Y+W+R PG GMRA  L R ILYNMGITD  CK++G RN+YSM+YA+F  LAKHRG+E  A+ RGKRIL+L R
Sbjct:   97 VSMTDKDKPDVVDLADLIMSGTSYEEAVKGTEFDALDKETSKEFEESTRRLTALRENRLEEYLEETGETDLLDKVRAIYGEPET---SEQTDGPAPPKKKKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKRILSLQR 363          
BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: D7FTY0_ECTSI (S5 DRBM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTY0_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 3.650e-98
Identity = 159/266 (59.77%), Postives = 198/266 (74.44%), Query Frame = 0
Query:   96 LSMTDEDKPDFFDLADLIMSGMSYKDAVRGTDFDDLDADADTQIEEAKRRMALLREDSLEEYLLEKGEADLVNEANAVEIKRRKRLEKMEVNKPAPAPEHVEMAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHR 361
            +SMTD+DKPD  DLADLIMSG SY++AV+GT+FD LD +   + EE+ RR+  LRE+ LEEYL E GE DL+++  A+     +  E+ +   P    + VEMAQG WAE+LVH+DRV KTVKGGME+ YRALV VGNL+GVGGFA+GKA+ PA A+ EASRKAKL  NLVYV+RYKQA L  D++GKHNG K Y+W+R       A  L R ILYNMGITD  CK++G RN+YSM+YA+F  LAKHRG+E  A+ RGKRIL+L R
Sbjct:   38 VSMTDKDKPDVVDLADLIMSGTSYEEAVKGTEFDALDKETSKEFEESTRRLTALRENRLEEYLEETGETDLLDKVRAI-YGEPETSEQTDGPAPPKKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSR-------AGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKRILSLQR 295          
BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A6H5LA05_9PHAE (S5 DRBM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA05_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.280e-53
Identity = 88/120 (73.33%), Postives = 100/120 (83.33%), Query Frame = 0
Query:  198 MAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITD 317
            MAQG WAE+LVH+DRV KTVKGGME+ YRALV VGNL+GVGGFA+GKA+ PA A+ EASRKAKL  NLVYV+RYKQA L  D++GKHNG K Y+W+R PG GMRA  L R ILYNMGITD
Sbjct:    1 MAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITD 120          
BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A7S2SS45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS45_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.420e-39
Identity = 78/159 (49.06%), Postives = 105/159 (66.04%), Query Frame = 0
Query:  201 GDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTL 359
            G WAE +V +DRVQK +KGGM +SYR LVVVGN +GVGGF +GKA + A++V    R+AK  +NLV V RYK   L   V G+HN CK  + A  PGYG +     ++IL  MGI D   K  G R   S+V A+FK LA+H+ L++ +++RG+RIL +
Sbjct:  217 GRWAETIVRADRVQKVIKGGMIMSYRTLVVVGNGHGVGGFGVGKAQDAAESVARGIRQAK--KNLVVVDRYKNTALVHTVEGRHNNCKVVLRAVPPGYGFKGGRTAQAILQQMGIADCTAKAYGRRTPASVVQAIFKALARHKSLDQISRSRGRRILEM 373          
BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A7S3ZVY7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVY7_9STRA)

HSP 1 Score: 149 bits (377), Expect = 3.050e-38
Identity = 93/231 (40.26%), Postives = 132/231 (57.14%), Query Frame = 0
Query:  143 KRRMALLREDSLEEYLLEKGEADLVNEANAVEIKRRKRLEKMEVNKPAPAPEHVEMAQ-----GDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHRGHEIFAR 368
            +RR+  L  D +   +L+  + D+V EA    +     + + EV++  P P+  ++       G WAE +V  +RVQK V+GG  + YRALVVVGNL G GGFA GK ++P DAV  AS+ AK  R+L +V+R++   L  DV GKHN C   ++A+ PG G+   PL R IL  +G +    K  G R  YS   A F  L+KHR +EE A++RG+RIL +       AR
Sbjct:  130 ERRLPTL--DQIRAEMLQNDQHDIVREARFPGLI----MGEDEVDEEPPQPKKKKVVDPSEPLGKWAETIVKINRVQKVVRGGTIMRYRALVVVGNLMGAGGFAYGKGHSPRDAVARASKAAK--RDLRFVERFRDTSLLHDVRGKHNNCIVDIYAKPPGSGIVGGPLGRRILTQLGFSSFTIKARGRRTPYSYCAAAFDALSKHRSVEEIARSRGRRILEIEHAAARHAR 352          
BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A7S1YM29_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YM29_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.190e-36
Identity = 75/167 (44.91%), Postives = 104/167 (62.28%), Query Frame = 0
Query:  199 AQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHRGHEI 365
            A GDW ++ V  DRVQK  +GG  V YRAL V GN NG GGF  GKA++P +AV +A R+AK  RN+ + + +    L  D++G HN CK  + +   GYG++  PL+  IL   GI+DA  K  GNRN++++V A FK L  H+ LEE A  RGKR++ + + H  
Sbjct:  204 AFGDWGDMTVRVDRVQKVRRGGTTVRYRALAVGGNANGCGGFGTGKAHSPQEAVTKACREAK--RNIHFFEPHLGTGLTTDLVGTHNSCKVILLSVPKGYGLKGHPLIEDILKYFGISDATGKSFGNRNQFNVVRATFKALLTHQTLEEIALKRGKRLINIQKQHRF 368          
BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: F0Y2H1_AURAN (S5 DRBM domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2H1_AURAN)

HSP 1 Score: 139 bits (349), Expect = 9.290e-36
Identity = 79/171 (46.20%), Postives = 102/171 (59.65%), Query Frame = 0
Query:  189 PAPAPEHVEMAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTL 359
            P P PE     +G WAE +V  DRVQK V+GG  + YRALV VGNL G GGFA GK ++P DAV  ASR+AK   +L +V R++   L  DV GKHN C   ++A  PG GM    L R+I+  +G +    K  G R+ YS V A F  LA    +E+ A+ RG+RIL +
Sbjct:   32 PEPKPEPAG-PEGRWAETIVKIDRVQKVVRGGTIMRYRALVAVGNLMGAGGFAFGKGHSPQDAVARASRRAKT--DLRFVDRHRDVALAHDVRGKHNNCTVDIYAVPPGKGMVGGALGRAIMTQLGFSSFTIKARGRRSPYSYVAATFDALANLASVEDIARKRGRRILEI 199          
BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A7S1U8N8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8N8_9STRA)

HSP 1 Score: 137 bits (345), Expect = 4.480e-35
Identity = 72/166 (43.37%), Postives = 103/166 (62.05%), Query Frame = 0
Query:  200 QGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHRGHEI 365
            +G W E L+  D+VQK V GG    +RAL VVGN+NG  GF +GKA +  DA  ++ R AK  +N++ V RY    LY D+ GKHNGC+ +++AR     +RA  +  +I+   GI DA  ++ G  N YS+V A F  L+KHR +   A+ RG+RIL+L+R  E+
Sbjct:   51 KGPWMENLIMVDQVQKVVPGGTVPRFRALTVVGNINGAVGFGVGKAEDIQDATEKSFRNAK--KNIIIVDRYFGRALYHDLYGKHNGCRVWIYARPVNTELRAGRITAAIMEAAGIMDATVRIDGPMNPYSVVRATFNALSKHRSIVHHARVRGRRILSLYRQREL 214          
BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A1Z5K7E2_FISSO (Small subunit ribosomal protein S5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7E2_FISSO)

HSP 1 Score: 141 bits (355), Expect = 1.070e-34
Identity = 76/165 (46.06%), Postives = 104/165 (63.03%), Query Frame = 0
Query:  197 EMAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHR 361
            ++A G+W+E+LV  DR  K  +GG   SYRALV+ GNLNG GGF +GK+ +P +AV  ASRK K  RN+ +V RY+   L  D+ GK N CK Y+  R    G+R + L+R IL   GIT+   K  GNRN Y++  A FK L  H  +E+ A  RGKR++++ R
Sbjct:  234 QLAHGEWSEMLVTVDRTTKLWRGGRLESYRALVIGGNLNGCGGFGIGKSKDPINAVAVASRKCK--RNIFFVDRYQGNGLTSDLAGKQNSCKVYL--RSTDDGLRGNHLIREILKRFGITNCVAKSHGNRNPYNVTRATFKALMTHESIEDIALKRGKRLVSIDR 394          
BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A448Z056_9STRA (S5 DRBM domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z056_9STRA)

HSP 1 Score: 139 bits (350), Expect = 9.560e-34
Identity = 76/171 (44.44%), Postives = 103/171 (60.23%), Query Frame = 0
Query:  195 HVEMAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHRGHEI 365
            H ++A G+W E+L+ +DRV K  +GG  VS+RALV+ GNL G  GF +GKA  P DAV  A R AK  RN+ +V RY+   L  D++G+ N CK  +  R    G+R +PL   IL  MGIT+   K  G+RN Y++V A FK L  H  L+E A  RG R++ L R   +
Sbjct:  264 HNQLAHGEWGEMLIRTDRVSKMWRGGRVVSFRALVIGGNLRGCAGFGIGKAFEPEDAVEIACRMAK--RNIFFVDRYRGRTLTRDLVGRQNSCKVVL--RTTTNGLRGNPLCCEILKLMGITNVVAKAHGSRNHYNVVRATFKALMTHESLDEVALKRGLRLVNLQRAKRL 430          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTY3_ECTSI6.090e-10361.11S5 DRBM domain-containing protein n=1 Tax=Ectocarp... [more]
D7FTY0_ECTSI3.650e-9859.77S5 DRBM domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5LA05_9PHAE1.280e-5373.33S5 DRBM domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2SS45_9STRA2.420e-3949.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3ZVY7_9STRA3.050e-3840.26Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1YM29_9STRA2.190e-3644.91Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
F0Y2H1_AURAN9.290e-3646.20S5 DRBM domain-containing protein n=1 Tax=Aureococ... [more]
A0A7S1U8N8_9STRA4.480e-3543.37Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1Z5K7E2_FISSO1.070e-3446.06Small subunit ribosomal protein S5 n=2 Tax=Fistuli... [more]
A0A448Z056_9STRA9.560e-3444.44S5 DRBM domain-containing protein n=1 Tax=Pseudo-n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..152
NoneNo IPR availableGENE3D3.30.160.20coord: 194..266
e-value: 1.8E-17
score: 65.0
NoneNo IPR availablePANTHERPTHR13718:SF9128S RIBOSOMAL PROTEIN S5, MITOCHONDRIALcoord: 188..364
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 200..270
IPR005324Ribosomal protein S5, C-terminalPFAMPF03719Ribosomal_S5_Ccoord: 282..352
e-value: 8.0E-17
score: 60.5
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 270..361
e-value: 2.2E-15
score: 58.0
IPR013810Ribosomal protein S5, N-terminalPFAMPF00333Ribosomal_S5coord: 204..269
e-value: 6.0E-20
score: 71.0
IPR013810Ribosomal protein S5, N-terminalPROSITEPS50881S5_DSRBDcoord: 203..266
score: 14.858
IPR000851Ribosomal protein S5PANTHERPTHR13718RIBOSOMAL S SUBUNITcoord: 188..364
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 276..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4909contigH-paniculata_contig4909:7769..12558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4909.12076.1mRNA_H-paniculata_contig4909.12076.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4909 7732..13034 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4909.12076.1 ID=prot_H-paniculata_contig4909.12076.1|Name=mRNA_H-paniculata_contig4909.12076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=369bp
MAYATASRALQIALKRRCNITFPPPSTTGCCVASSLRQCRQQPIKRTQHQ
QQQQQVRAIHLTRVVFSDQERGGKGTSSEGGEEDGAVDMQEKSSKLSMTD
EDKPDFFDLADLIMSGMSYKDAVRGTDFDDLDADADTQIEEAKRRMALLR
EDSLEEYLLEKGEADLVNEANAVEIKRRKRLEKMEVNKPAPAPEHVEMAQ
GDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPAD
AVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGM
RASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQ
TRGKRILTLHRGHEIFAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005324Ribosomal_S5_C
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR013810Ribosomal_S5_N
IPR000851Ribosomal_S5
IPR020568Ribosomal_S5_D2-typ_fold