mRNA_H-paniculata_contig4909.12076.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig4909.12076.1
Unique Name	mRNA_H-paniculata_contig4909.12076.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: D7FTY3_ECTSI (S5 DRBM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTY3_ECTSI)

HSP 1 Score: 317 bits (811), Expect = 2.140e-100
Identity = 165/270 (61.11%), Postives = 204/270 (75.56%), Query Frame = 2

Query:  323 LSMTDEDKPDFFDLADLIMSGMSYKDAVRGTDFDDLDADADTQIEEAKRRMALLREDSLEEYLLEKGEADLVNEANAVEIKRRKRLEKMEVNKPAPAPEH----VEMAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHR 1120
            +SMTD+DKPD  DLADLIMSG SY++AV+GT+FD LD +   + EE+ RR+  LRE+ LEEYL E GE DL+++  A+  +        + + PAP  +     VEMAQG WAE+LVH+DRV KTVKGGME+ YRALV VGNL+GVGGFA+GKA+ PA A+ EASRKAKL  NLVYV+RYKQA L  D++GKHNG K Y+W+R PG GMRA  L R ILYNMGITD  CK++G RN+YSM+YA+F  LAKHRG+E  A+ RGKRIL+L R
Sbjct:   97 VSMTDKDKPDVVDLADLIMSGTSYEEAVKGTEFDALDKETSKEFEESTRRLTALRENRLEEYLEETGETDLLDKVRAIYGEPET---SEQTDGPAPPKKKKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKRILSLQR 363

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BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: D7FTY0_ECTSI (S5 DRBM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTY0_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 1.160e-95
Identity = 159/266 (59.77%), Postives = 198/266 (74.44%), Query Frame = 2

Query:  323 LSMTDEDKPDFFDLADLIMSGMSYKDAVRGTDFDDLDADADTQIEEAKRRMALLREDSLEEYLLEKGEADLVNEANAVEIKRRKRLEKMEVNKPAPAPEHVEMAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHR 1120
            +SMTD+DKPD  DLADLIMSG SY++AV+GT+FD LD +   + EE+ RR+  LRE+ LEEYL E GE DL+++  A+     +  E+ +   P    + VEMAQG WAE+LVH+DRV KTVKGGME+ YRALV VGNL+GVGGFA+GKA+ PA A+ EASRKAKL  NLVYV+RYKQA L  D++GKHNG K Y+W+R       A  L R ILYNMGITD  CK++G RN+YSM+YA+F  LAKHRG+E  A+ RGKRIL+L R
Sbjct:   38 VSMTDKDKPDVVDLADLIMSGTSYEEAVKGTEFDALDKETSKEFEESTRRLTALRENRLEEYLEETGETDLLDKVRAI-YGEPETSEQTDGPAPPKKKKTVEMAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSR-------AGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKRILSLQR 295

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BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A6H5LA05_9PHAE (S5 DRBM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA05_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 6.890e-52
Identity = 88/120 (73.33%), Postives = 100/120 (83.33%), Query Frame = 2

Query:  629 MAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITD 988
            MAQG WAE+LVH+DRV KTVKGGME+ YRALV VGNL+GVGGFA+GKA+ PA A+ EASRKAKL  NLVYV+RYKQA L  D++GKHNG K Y+W+R PG GMRA  L R ILYNMGITD
Sbjct:    1 MAQGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITD 120

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BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A7S2SS45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS45_9STRA)

HSP 1 Score: 152 bits (385), Expect = 9.250e-38
Identity = 78/159 (49.06%), Postives = 105/159 (66.04%), Query Frame = 2

Query:  638 GDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTL 1114
            G WAE +V +DRVQK +KGGM +SYR LVVVGN +GVGGF +GKA + A++V    R+AK  +NLV V RYK   L   V G+HN CK  + A  PGYG +     ++IL  MGI D   K  G R   S+V A+FK LA+H+ L++ +++RG+RIL +
Sbjct:  217 GRWAETIVRADRVQKVIKGGMIMSYRTLVVVGNGHGVGGFGVGKAQDAAESVARGIRQAK--KNLVVVDRYKNTALVHTVEGRHNNCKVVLRAVPPGYGFKGGRTAQAILQQMGIADCTAKAYGRRTPASVVQAIFKALARHKSLDQISRSRGRRILEM 373

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BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A7S3ZVY7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVY7_9STRA)

HSP 1 Score: 149 bits (377), Expect = 7.660e-37
Identity = 93/231 (40.26%), Postives = 132/231 (57.14%), Query Frame = 2

Query:  464 KRRMALLREDSLEEYLLEKGEADLVNEANAVEIKRRKRLEKMEVNKPAPAPEHVEMAQ-----GDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHRGHEIFAR 1141
            +RR+  L  D +   +L+  + D+V EA    +     + + EV++  P P+  ++       G WAE +V  +RVQK V+GG  + YRALVVVGNL G GGFA GK ++P DAV  AS+ AK  R+L +V+R++   L  DV GKHN C   ++A+ PG G+   PL R IL  +G +    K  G R  YS   A F  L+KHR +EE A++RG+RIL +       AR
Sbjct:  130 ERRLPTL--DQIRAEMLQNDQHDIVREARFPGLI----MGEDEVDEEPPQPKKKKVVDPSEPLGKWAETIVKINRVQKVVRGGTIMRYRALVVVGNLMGAGGFAYGKGHSPRDAVARASKAAK--RDLRFVERFRDTSLLHDVRGKHNNCIVDIYAKPPGSGIVGGPLGRRILTQLGFSSFTIKARGRRTPYSYCAAAFDALSKHRSVEEIARSRGRRILEIEHAAARHAR 352

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BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A7S1YM29_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YM29_9STRA)

HSP 1 Score: 144 bits (364), Expect = 6.680e-35
Identity = 75/167 (44.91%), Postives = 104/167 (62.28%), Query Frame = 2

Query:  632 AQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHRGHEI 1132
            A GDW ++ V  DRVQK  +GG  V YRAL V GN NG GGF  GKA++P +AV +A R+AK  RN+ + + +    L  D++G HN CK  + +   GYG++  PL+  IL   GI+DA  K  GNRN++++V A FK L  H+ LEE A  RGKR++ + + H  
Sbjct:  204 AFGDWGDMTVRVDRVQKVRRGGTTVRYRALAVGGNANGCGGFGTGKAHSPQEAVTKACREAK--RNIHFFEPHLGTGLTTDLVGTHNSCKVILLSVPKGYGLKGHPLIEDILKYFGISDATGKSFGNRNQFNVVRATFKALLTHQTLEEIALKRGKRLINIQKQHRF 368

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BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: F0Y2H1_AURAN (S5 DRBM domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2H1_AURAN)

HSP 1 Score: 138 bits (348), Expect = 2.340e-34
Identity = 79/171 (46.20%), Postives = 102/171 (59.65%), Query Frame = 2

Query:  602 PAPAPEHVEMAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTL 1114
            P P PE     +G WAE +V  DRVQK V+GG  + YRALV VGNL G GGFA GK ++P DAV  ASR+AK   +L +V R++   L  DV GKHN C   ++A  PG GM    L R+I+  +G +    K  G R+ YS V A F  LA    +E+ A+ RG+RIL +
Sbjct:   32 PEPKPEPAG-PEGRWAETIVKIDRVQKVVRGGTIMRYRALVAVGNLMGAGGFAFGKGHSPQDAVARASRRAKT--DLRFVDRHRDVALAHDVRGKHNNCTVDIYAVPPGKGMVGGALGRAIMTQLGFSSFTIKARGRRSPYSYVAATFDALANLASVEDIARKRGRRILEI 199

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BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A7S1U8N8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8N8_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.080e-33
Identity = 72/166 (43.37%), Postives = 103/166 (62.05%), Query Frame = 2

Query:  635 QGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHRGHEI 1132
            +G W E L+  D+VQK V GG    +RAL VVGN+NG  GF +GKA +  DA  ++ R AK  +N++ V RY    LY D+ GKHNGC+ +++AR     +RA  +  +I+   GI DA  ++ G  N YS+V A F  L+KHR +   A+ RG+RIL+L+R  E+
Sbjct:   51 KGPWMENLIMVDQVQKVVPGGTVPRFRALTVVGNINGAVGFGVGKAEDIQDATEKSFRNAK--KNIIIVDRYFGRALYHDLYGKHNGCRVWIYARPVNTELRAGRITAAIMEAAGIMDATVRIDGPMNPYSVVRATFNALSKHRSIVHHARVRGRRILSLYRQREL 214

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BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A1Z5K7E2_FISSO (Small subunit ribosomal protein S5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7E2_FISSO)

HSP 1 Score: 140 bits (354), Expect = 2.920e-33
Identity = 76/165 (46.06%), Postives = 104/165 (63.03%), Query Frame = 2

Query:  626 EMAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHR 1120
            ++A G+W+E+LV  DR  K  +GG   SYRALV+ GNLNG GGF +GK+ +P +AV  ASRK K  RN+ +V RY+   L  D+ GK N CK Y+  R    G+R + L+R IL   GIT+   K  GNRN Y++  A FK L  H  +E+ A  RGKR++++ R
Sbjct:  234 QLAHGEWSEMLVTVDRTTKLWRGGRLESYRALVIGGNLNGCGGFGIGKSKDPINAVAVASRKCK--RNIFFVDRYQGNGLTSDLAGKQNSCKVYL--RSTDDGLRGNHLIREILKRFGITNCVAKSHGNRNPYNVTRATFKALMTHESIEDIALKRGKRLVSIDR 394

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BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Match: A0A448Z056_9STRA (S5 DRBM domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z056_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.470e-32
Identity = 76/171 (44.44%), Postives = 103/171 (60.23%), Query Frame = 2

Query:  620 HVEMAQGDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPADAVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGMRASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQTRGKRILTLHRGHEI 1132
            H ++A G+W E+L+ +DRV K  +GG  VS+RALV+ GNL G  GF +GKA  P DAV  A R AK  RN+ +V RY+   L  D++G+ N CK  +  R    G+R +PL   IL  MGIT+   K  G+RN Y++V A FK L  H  L+E A  RG R++ L R   +
Sbjct:  264 HNQLAHGEWGEMLIRTDRVSKMWRGGRVVSFRALVIGGNLRGCAGFGIGKAFEPEDAVEIACRMAK--RNIFFVDRYRGRTLTRDLVGRQNSCKVVL--RTTTNGLRGNPLCCEILKLMGITNVVAKAHGSRNHYNVVRATFKALMTHESLDEVALKRGLRLVNLQRAKRL 430

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4909.12076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FTY3_ECTSI	2.140e-100	61.11	S5 DRBM domain-containing protein n=1 Tax=Ectocarp...	[more]
D7FTY0_ECTSI	1.160e-95	59.77	S5 DRBM domain-containing protein n=2 Tax=Ectocarp...	[more]
A0A6H5LA05_9PHAE	6.890e-52	73.33	S5 DRBM domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A7S2SS45_9STRA	9.250e-38	49.06	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S3ZVY7_9STRA	7.660e-37	40.26	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S1YM29_9STRA	6.680e-35	44.91	Hypothetical protein n=1 Tax=Grammatophora oceanic...	[more]
F0Y2H1_AURAN	2.340e-34	46.20	S5 DRBM domain-containing protein n=1 Tax=Aureococ...	[more]
A0A7S1U8N8_9STRA	1.080e-33	43.37	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A1Z5K7E2_FISSO	2.920e-33	46.06	Small subunit ribosomal protein S5 n=2 Tax=Fistuli...	[more]
A0A448Z056_9STRA	2.470e-32	44.44	S5 DRBM domain-containing protein n=1 Tax=Pseudo-n...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4909	contig	H-paniculata_contig4909:7732..13034 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	318.5
Seed ortholog evalue	4e-84
Seed eggNOG ortholog	2880.D7FTY3
Preferred name	MRPS5
KEGG ko	ko:K02988,ko:K14026
KEGG Pathway	ko03010,ko04141,map03010,map04141
KEGG Module	M00178,M00179,M00403
Hectar predicted targeting category	mitochondrion
GOs	GO:0000313,GO:0000314,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005761,GO:0005763,GO:0005840,GO:0006412,GO:0006414,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0019866,GO:0022411,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032543,GO:0032984,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0070125,GO:0070126,GO:0071704,GO:0071840,GO:0098798,GO:0140053,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.	structural constituent of ribosome
EggNOG OGs	COG0098@1,KOG2646@2759
COG Functional cat.	J
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	br01610,ko00000,ko00001,ko00002,ko03011
Exons	9
Model size	1620
Cds size	1107
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930452.0470552-UTR-H-paniculata_contig4909:7731..7768	1622930452.0470552-UTR-H-paniculata_contig4909:7731..7768	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4909 7732..7768 +
1691481297.831371-UTR-H-paniculata_contig4909:7731..7768	1691481297.831371-UTR-H-paniculata_contig4909:7731..7768	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4909 7732..7768 +
1622930452.2063084-UTR-H-paniculata_contig4909:12558..13034	1622930452.2063084-UTR-H-paniculata_contig4909:12558..13034	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4909 12559..13034 +
1691481297.9471455-UTR-H-paniculata_contig4909:12558..13034	1691481297.9471455-UTR-H-paniculata_contig4909:12558..13034	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4909 12559..13034 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4909.12076.1	prot_H-paniculata_contig4909.12076.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig4909 7769..12558 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig4909:7732..13034+
coding sequence from alignment at H-paniculata_contig4909:7732..13034+

protein sequence of mRNA_H-paniculata_contig4909.12076.1

>prot_H-paniculata_contig4909.12076.1 ID=prot_H-paniculata_contig4909.12076.1|Name=mRNA_H-paniculata_contig4909.12076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=369bp
MAYATASRALQIALKRRCNITFPPPSTTGCCVASSLRQCRQQPIKRTQHQ
QQQQQVRAIHLTRVVFSDQERGGKGTSSEGGEEDGAVDMQEKSSKLSMTD
EDKPDFFDLADLIMSGMSYKDAVRGTDFDDLDADADTQIEEAKRRMALLR
EDSLEEYLLEKGEADLVNEANAVEIKRRKRLEKMEVNKPAPAPEHVEMAQ
GDWAELLVHSDRVQKTVKGGMEVSYRALVVVGNLNGVGGFAMGKANNPAD
AVIEASRKAKLPRNLVYVQRYKQACLYMDVLGKHNGCKTYVWARQPGYGM
RASPLLRSILYNMGITDAGCKVVGNRNRYSMVYALFKGLAKHRGLEETAQ
TRGKRILTLHRGHEIFAR*

mRNA from alignment at H-paniculata_contig4909:7732..13034+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig4909.12076.1 ID=mRNA_H-paniculata_contig4909.12076.1|Name=mRNA_H-paniculata_contig4909.12076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5303bp|location=Sequence derived from alignment at H-paniculata_contig4909:7732..13034+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTAGAAGCTGGTCTTTCCAACCCACAACCCTTGTGTGATGGCTTATGCGA
CTGCATCTCGAGCTCTCCAGATTGCACTGAAGAGACGATGCAACATCACG
TTCCCACCACCGTCGACGACAGGATGCTGTGTTGCCAGTAGCCTACGGTA
AGCTTCGTGTTGTATTGATTAATCATGAGGTGTGCATGCGATTTGTGAGT
GTGCTTGACGTGTAACTTGTGCAGGGACATCACCTTGATACTTGATGGTG
CTGCGTTGCGGGGGCGATTTTTCTTGCATACAGCCCTAATAGCGTGGCAT
GGACTGGGAGCTTGTCCAAAGTTTAGAATAGCAGTAGATCTAAGCGGACA
ATCTAATCATCACACCCCCTTGCTTTTGGCGCCCTTCATTATGTCTTGTT
GTGTCAAATACAAGTCAATGCCGCCAGCAACCGATCAAAAGGACCCAGCA
CCAGCAGCAACAGCAGCAGGTTCGCGCGATTCATCTTACACGAGTTGTTT
TTTCTGATCAAGAGCGGGGTGGAAAGGGAACCTCAAGCGAAGGGGGGGAA
GAAGATGGAGCGGTCGACATGCAGGAAAAATCGTCAAAGCTCTCTATGAC
CGACGAGGACAAACCTGACTTCTTTGATTTGGTAGGTAGGTGCAAGTAGT
GTACCTGGTAGTTTATATTCACTCGCCTTGCGTTCGCCCATTTCACAAGC
CAGGTACCATACAAATACAGTCGTGCCATCACTCATATTGTATATATGTT
CCATTCGTGTATTTAGTACAGAAAGGATATTGCACATCCTTGGACCGTTT
TAGCATCGTGAACGCTTTTTCGGATACAAAGGGTATTCAATAAGTCACGC
TACGAAGGGGGTGGGAGGGGCTAGCGCTTGAAATATTTTCTGTTCTAAAT
CTATAGTACATAAAATCGTTAAATAGGAAGCTATGGTGTTTACGGAAAAG
GAAATCCATTTCGAATCTAGCTTGTTAATTCACCCGTTACGCAACATTGC
ACCACATCTCGGCAGCGGACCACAGCTGTATCCTCAATTGATGAAGGTGA
TATCCTTGCCTACAGTGTGGGTACCCCAACATTTGGAATAAATCAAACAT
TCGTATCTGCGCAAACGAGATTTTAATACTTGAATTGACACGAGAATCAG
AGATCACACGAGGAATTCCTGTTGCGCGAACACCCTAATGTATGTATAAT
CGTATTCGATGTATTTTTGACCATGACACGAGATCAATCGAAGCGGTTGA
GCTGAAAAACATTACAACCCTGTACACGTTTTTGTAACATCAATGGTCGT
TGTGGCAATCGTCAGTTCTGCAGCATTTATGCTTCGTCTCGTGTAACTTT
CTTCCTTCGGTGGCAGAGCCAACCTAATCTGCGTGCGCAACTCCGTTCCT
ACCGATAAATTTGTGTTGGTTTGCAGGCAGATTTGATCATGTCCGGAATG
AGCTATAAGGATGCCGTGCGAGGGACCGATTTTGATGATCTAGACGCCGA
TGCTGATACGCAAATCGAGGAAGCTAAGCGGCGAATGGCGTTGCTTAGAG
AAGACTCCCTGGAGGAGTATCTTCTAGAAAAGGGGTGGGTGCAAAAATAT
CCCTGTTCCTGCCTAACTCGTTGCCAGAAACCTCAACACCACGGTCATGC
CCCAGCGGCGAGCAGTGATCCATTCATCTAGATGCGGATTTGGTTTGGGA
TTGATGTTTCCCATGGAAATTCAAGTACATGAACACGACATGCACAAATC
AATGATTTTCGCCCTCAGAAGGGTACAAAAGAACGCGTTCAAGCTCTCCC
ATATTTATGGCTGTGTCGTGGCATCTGCCTGACGTTGTTTTTTGATAGGG
AAGCAGATTTGGTGAACGAGGCCAACGCTGTGGAGATCAAAAGAAGAAAG
AGATTGGAAAAGGTGAGTACAATGATAGGGACACGGGGCACACGTAGAAT
TGAATGGTCGAGAATGCCTGATTGACGTACACCGTCGCTCGTTGCCCACC
GTACCTCAGCCATCTCGGTATGGAGAAGTACAGCTGCGTCAGCAGTGGAG
GGAAGTCGCGTCAGTTTTCAATCAGACTACAGATGACAATACACGTATCT
TGAAGCCACGACGGAACTCACTATCTATTTATCCGTCTCGTGAAAATACA
TTCAGATTGTACCCTTTGCCACGATTACAATCTTTCCCCCTTCCGGCATT
ACGATTCTTTTGCTGTCAAGTGTGACCGATCTTGTGTATAATGTATACAC
GTTTAACATGGAGCTTTCTCTGTTCCAGTGTGATTCCCTTCTCGTTGATG
ACACCCCTCCAGAAACTTACGATCGTGTTGCTATTTGGACGTGCTTCTCC
TTGGTAATATTATTCAGTAGAAGGAAACACGTGTTCGACATGCTTTGGTT
GTTCATTATTTTATCGCCGTGATATCATGTTTGCATGTCTATTTGTCTTG
AATTTGGTCGTTTCACCTTTTGGTCAACAATTGTGCTTTGGGTTCTCCGA
ACACGTGGCTTGAGATTTACTGGGCTGTTCACGTCCGACTTCCCGCAGAA
CATCCACGATTGCTTTTCGCTGTTAAGTCGAACGTTTGCGCGGGAGTGTT
GTTCTTGGTGGGGCTGTTGTTGCTGTTGCTGTTGTTGTTCCTGTTGGGAT
ATCTGTTCGTAAGAGGAGCAAGCACCACAGACCCATGCGTTGTAAAGAGG
GGTATCGGGTCTCGCTTTTGTTGGGAAGTAGGGGCCCATCTCTCCAGGTT
CCAATCACATGGGATCGGGGCGTGACTTTTCCTCGTATCATGATGTCGTA
TTCGGAGTGTACTGTACATGTCTCCGTCGCCAAAACTTGGTGGTTATCAC
GTATTTCGCGTTAGTGCTTGGCTAGCAATTTGAATACCCTTCGATGCCTC
CAGGCATGGTGTTACTGTGCTTGTGATGTATTGCATTGTGTGTCACTTTG
CGTTAGCAAGGGATTACGAGGTGTGGTGCGATAATTTTCGGGGTCTGTTC
TCAAGAATAATTATTTTCACGCCTAAGAAATATTTCCATTTCCATTAATT
TCGTTCCCGGCATGATACACGACAATGTCTTGGATAAGATCGCTATATGA
GTGTGTTCTGACGTGAGACGCATGCCCTCGTATATAGATGTCGGAGCATT
TGGGTTTCAAACATGAATAATATTTGCGACCTTTCATGGCGTCCGCACAG
ATGGAGGTCAACAAACCCGCCCCAGCTCCCGAACATGTGGAAATGGCACA
AGGTGACTGGGCGGAGCTCTTGGTGCATAGCGACCGCGTACAGAAGGCAA
GTATTATACTAGACCCCCAGCCAGCAAGTGTTGACTGTTGTCAAATCTAA
TGCATATCCAGATGTTGTTTCCAGGTGATTTGTGTATCCATGCCAAGAGC
TATGGTTTATAGCGAACATTTCATTTTACAAACATGTTCGTTTTTCACCT
AGCAACACTCATCCACTTGCCACCCGAATGTCGCGGCTTGCACTTGCGGG
AGGTTTAGCTTTAGAAAGGTGTAAAGAGGTCCAGCGTTGCTTTTTGTGTG
TAGTTTTTGTTGAAACGAATTGTCGCCGTGTTTTTGCACGCAGACGGTGA
AAGGAGGAATGGAGGTGTCCTACCGGGCGCTGGTTGTGGTGGGTAACCTA
AACGGGGTAGGAGGCTTTGCCATGGGCAAGGCGAACAACCCAGCGGACGC
TGTGATCGAAGCAAGCCGGTAAGTAGCCGTGACGAATTTGTGGTATTTAT
TGCTTCTTTTTGGTGGGGATTAGGATTAGCAAACAAAAAGAAATGTGGGA
GCGCAATCTGTTTGCTGGCACATTATACTATTTCGTGTTTCCCGAGTCCA
TTCACATCTGAAAATATTCGACAATTGATTTTGTCAACGTTCTATTTGCC
CTGCAGCAAAGCAAAATTACCGAGAAATCTGGTGTACGTGCAGCGTTACA
AGCAGGCGTGCCTCTACATGGACGTGTTGGGGAAGCATAACGGCTGTAAA
GTGAGTGAACTCAGCAGATAGGGATGGTGTTGAGACCTGTTGGTATCGTT
TGCTGACGTTTGCTTCTGGTTATTGATGCATCAAGTAGAAAAAGCACATG
AGCCAGAACCGACCCAGCAACGACAGGTTGAGCCTTCCCTTGTGCTGTAT
TGTCGAGGAACTGACTTATTTGTTATTTGGGTTGTAGGGGGGGAAGCCAG
TGTTTGCCCGTCATCGTCTGCACTGAATTTGAGCTAAGAGCGCCCTAGAC
GGGTTAAAGCGGACCGCGCTTTGCACCTGAGATGCACTAGTCAGCTTTCC
AGAGCTGGTAAGACATTCTATTGACGTATCTGTTGCCGTATATAAGTTGC
TGTTACGACGTCTGGTTCGTGAAGGATCGATTCCAATCCTATGGCGTCCT
TAAATTCTCGGCCGTGACAGACGTACGTGTGGGCGAGGCAGCCAGGGTAT
GGTATGAGAGCGTCGCCCCTTCTGCGAAGTATCCTGTACAACATGGGCAT
CACTGACGCTGGGGTAAGATAGAATACGAAGAACAGGGGTCCGGTGGGTT
TCATGCAATTCGCAGTTGTGAAGTAAAATAAATGCCAAGGTAGGAATGCA
TGGTGCTCCCACAACATTGTTGTAGCAGCCTGGTAATACCTCTGCCCGCG
CGCCCTCCTTGTGTTGTTCTTGATCAGTGCAAGGTTGTGGGAAACCGCAA
TAGATATTCGATGGTGTACGCTCTCTTCAAAGGCCTTGCTAAGCACAGGG
GACTTGAAGAAACGGCTCAAACTCGAGGCAAACGCATTTTAACCCTTCAC
CGCGGGCATGAAATTTTCGCGCGGTAGAAGGTCAAGAGAAAGAACGGCTT
GGACGCTGCGGAGCTTCCGGGTAACTTCTGGATCAGTAACTAATTGTATG
TTCCTGGCAGGATGGATGGATACCTTCTCACGAAATAGCGTGTGGGATGA
AGTGACAACAGGGTGGTGGATAAATACTGTTTATCCTATTTTCCCCCATT
TAACTGATAAAATGGACGTCGATGGGATGACTGTAGGATATGATATCGTT
TGCTGCCAGTGATTAAGCCGGAATGAAGTGTGGAATGTAATAAATGTTTC
TAATAACCTACGAAGAGAAGGATCATTTAAAAATAAATTATTTTTTCTGT
AGCAATTTTCCCCTGCGTTAGCAAGCAATCTTTGCGTAATGTTCCAGTTT
TGCCGTTTATCATAATTATGATAATATTGGTAATACATCGTGCGACATTG
TGGAAAAGGAAAGATAAATTCCCGTTAATGACCTTATATATCTTGTCGCT
GCG

Coding sequence (CDS) from alignment at H-paniculata_contig4909:7732..13034+

>mRNA_H-paniculata_contig4909.12076.1 ID=mRNA_H-paniculata_contig4909.12076.1|Name=mRNA_H-paniculata_contig4909.12076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2214bp|location=Sequence derived from alignment at H-paniculata_contig4909:7732..13034+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTTATGCGACTGCATCTCGAGCTCTCCAGATTGCACTGAAGAGACG
ATGCAACATCACGTTCCCACCACCGTCGACGACAGGATGCTGTGTTGCCA
GTAGCCTACGATGGCTTATGCGACTGCATCTCGAGCTCTCCAGATTGCAC
TGAAGAGACGATGCAACATCACGTTCCCACCACCGTCGACGACAGGATGC
TGTGTTGCCAGTAGCCTACGTCAATGCCGCCAGCAACCGATCAAAAGGAC
CCAGCACCAGCAGCAACAGCAGCAGGTTCGCGCGATTCATCTTACACGAG
TTGTTTTTTCTGATCAAGAGCGGGGTGGAAAGGGAACCTCAAGCGAAGGG
GGGGAAGAAGATGGAGCGGTCGACATGCAGGAAAAATCGTCAAAGCTCTC
TATGACCGACGAGGACAAACCTGACTTCTTTGATTTGTCAATGCCGCCAG
CAACCGATCAAAAGGACCCAGCACCAGCAGCAACAGCAGCAGGTTCGCGC
GATTCATCTTACACGAGTTGTTTTTTCTGATCAAGAGCGGGGTGGAAAGG
GAACCTCAAGCGAAGGGGGGGAAGAAGATGGAGCGGTCGACATGCAGGAA
AAATCGTCAAAGCTCTCTATGACCGACGAGGACAAACCTGACTTCTTTGA
TTTGGCAGATTTGATCATGTCCGGAATGAGCTATAAGGATGCCGTGCGAG
GGACCGATTTTGATGATCTAGACGCCGATGCTGATACGCAAATCGAGGAA
GCTAAGCGGCGAATGGCGTTGCTTAGAGAAGACTCCCTGGAGGAGTATCT
TCTAGAAAAGGGGCAGATTTGATCATGTCCGGAATGAGCTATAAGGATGC
CGTGCGAGGGACCGATTTTGATGATCTAGACGCCGATGCTGATACGCAAA
TCGAGGAAGCTAAGCGGCGAATGGCGTTGCTTAGAGAAGACTCCCTGGAG
GAGTATCTTCTAGAAAAGGGGGAAGCAGATTTGGTGAACGAGGCCAACGC
TGTGGAGATCAAAAGAAGAAAGAGATTGGAAAAGGGAAGCAGATTTGGTG
AACGAGGCCAACGCTGTGGAGATCAAAAGAAGAAAGAGATTGGAAAAGAT
GGAGGTCAACAAACCCGCCCCAGCTCCCGAACATGTGGAAATGGCACAAG
GTGACTGGGCGGAGCTCTTGGTGCATAGCGACCGCGTACAGAAGATGGAG
GTCAACAAACCCGCCCCAGCTCCCGAACATGTGGAAATGGCACAAGGTGA
CTGGGCGGAGCTCTTGGTGCATAGCGACCGCGTACAGAAGACGGTGAAAG
GAGGAATGGAGGTGTCCTACCGGGCGCTGGTTGTGGTGGGTAACCTAAAC
GGGGTAGGAGGCTTTGCCATGGGCAAGGCGAACAACCCAGCGGACGCTGT
GATCGAAGCAAGCCGACGGTGAAAGGAGGAATGGAGGTGTCCTACCGGGC
GCTGGTTGTGGTGGGTAACCTAAACGGGGTAGGAGGCTTTGCCATGGGCA
AGGCGAACAACCCAGCGGACGCTGTGATCGAAGCAAGCCGCAAAGCAAAA
TTACCGAGAAATCTGGTGTACGTGCAGCGTTACAAGCAGGCGTGCCTCTA
CATGGACGTGTTGGGGAAGCATAACGGCTGTAAACAAAGCAAAATTACCG
AGAAATCTGGTGTACGTGCAGCGTTACAAGCAGGCGTGCCTCTACATGGA
CGTGTTGGGGAAGCATAACGGCTGTAAAACGTACGTGTGGGCGAGGCAGC
CAGGGTATGGTATGAGAGCGTCGCCCCTTCTGCGAAGTATCCTGTACAAC
ATGGGCATCACTGACGCTGGGACGTACGTGTGGGCGAGGCAGCCAGGGTA
TGGTATGAGAGCGTCGCCCCTTCTGCGAAGTATCCTGTACAACATGGGCA
TCACTGACGCTGGGTGCAAGGTTGTGGGAAACCGCAATAGATATTCGATG
GTGTACGCTCTCTTCAAAGGCCTTGCTAAGCACAGGGGACTTGAAGAAAC
GGCTCAAACTCGAGGCAAACGCATTTTAACCCTTCACCGCGGGCATGAAA
TTTTCGCGCGGTAGTGCAAGGTTGTGGGAAACCGCAATAGATATTCGATG
GTGTACGCTCTCTTCAAAGGCCTTGCTAAGCACAGGGGACTTGAAGAAAC
GGCTCAAACTCGAGGCAAACGCATTTTAACCCTTCACCGCGGGCATGAAA
TTTTCGCGCGGTAG