prot_H-paniculata_contig49011.12062.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig49011.12062.1
Unique Nameprot_H-paniculata_contig49011.12062.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length55
Homology
BLAST of mRNA_H-paniculata_contig49011.12062.1 vs. uniprot
Match: A0A6H5JPB7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB7_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 7.800e-13
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0
Query:   13 AWFAMGIFVHEVWVLLQHANILLNPLCQRLDRNYGVALVSLR 54
            AW  +  FVHEVW+LLQHANILLNPLCQRLDR+YGV L+  R
Sbjct:  162 AWLVVATFVHEVWLLLQHANILLNPLCQRLDRSYGVGLLRRR 203          
BLAST of mRNA_H-paniculata_contig49011.12062.1 vs. uniprot
Match: D8LAY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY7_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 3.720e-12
Identity = 29/42 (69.05%), Postives = 34/42 (80.95%), Query Frame = 0
Query:   13 AWFAMGIFVHEVWVLLQHANILLNPLCQRLDRNYGVALVSLR 54
            AW  +  F HEVW+LLQHANILLNPLCQRLDR+YG+ L+  R
Sbjct:  162 AWLVVATFAHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRR 203          
BLAST of mRNA_H-paniculata_contig49011.12062.1 vs. uniprot
Match: A0A836C6P6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6P6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 9.100e-10
Identity = 25/36 (69.44%), Postives = 31/36 (86.11%), Query Frame = 0
Query:   19 IFVHEVWVLLQHANILLNPLCQRLDRNYGVALVSLR 54
            + VHEVWV+LQH N+LLNPLCQRLDR YG++L+  R
Sbjct:   44 LLVHEVWVMLQHLNVLLNPLCQRLDRGYGISLLKKR 79          
BLAST of mRNA_H-paniculata_contig49011.12062.1 vs. uniprot
Match: A0A7S3LJ98_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LJ98_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.450e-9
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    5 SEQSAEWSAWFAMGIFVHEVWVLLQHANILLNPLCQRLDRNYGVALVS 52
            ++ +   S W  + +F HE WV LQH N+L NPLCQRLDR YG+AL+ 
Sbjct:    6 NDSNVSTSHWLFLLLFCHEYWVYLQHCNVLANPLCQRLDRQYGIALLK 53          
BLAST of mRNA_H-paniculata_contig49011.12062.1 vs. uniprot
Match: A0A812Q1W1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812Q1W1_9DINO)

HSP 1 Score: 60.1 bits (144), Expect = 3.690e-9
Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 0
Query:   19 IFVHEVWVLLQHANILLNPLCQRLDRNYGVALV 51
            +F+HE WV+LQHAN+LLNP CQRLDR YGV+++
Sbjct:  334 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSML 366          
BLAST of mRNA_H-paniculata_contig49011.12062.1 vs. uniprot
Match: A0A812Z067_9DINO (Hypothetical protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812Z067_9DINO)

HSP 1 Score: 60.1 bits (144), Expect = 3.700e-9
Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 0
Query:   19 IFVHEVWVLLQHANILLNPLCQRLDRNYGVALV 51
            +F+HE WV+LQHAN+LLNP CQRLDR YGV+++
Sbjct:  336 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSML 368          
BLAST of mRNA_H-paniculata_contig49011.12062.1 vs. uniprot
Match: A0A1Q9D0R3_SYMMI (Caroteno-chlorophyll a-c-binding protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9D0R3_SYMMI)

HSP 1 Score: 60.1 bits (144), Expect = 3.720e-9
Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 0
Query:   19 IFVHEVWVLLQHANILLNPLCQRLDRNYGVALV 51
            +F+HE WV+LQHAN+LLNP CQRLDR YGV+++
Sbjct:  334 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSML 366          
BLAST of mRNA_H-paniculata_contig49011.12062.1 vs. uniprot
Match: A0A812V2L4_9DINO (CER3 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V2L4_9DINO)

HSP 1 Score: 60.1 bits (144), Expect = 3.720e-9
Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 0
Query:   19 IFVHEVWVLLQHANILLNPLCQRLDRNYGVALV 51
            +F+HE WV+LQHAN+LLNP CQRLDR YGV+++
Sbjct:  330 LFLHEAWVMLQHANVLLNPFCQRLDRRYGVSML 362          
BLAST of mRNA_H-paniculata_contig49011.12062.1 vs. uniprot
Match: A0A7S4KNY6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KNY6_GUITH)

HSP 1 Score: 58.9 bits (141), Expect = 9.410e-9
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0
Query:   15 FAMGIFVHEVWVLLQHANILLNPLCQRLDRNYGVALVSLRY 55
            F   +F HEVW+ +QHAN+LLNP  QRLDR YG+AL+  R+
Sbjct:  103 FTWILFAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRF 143          
BLAST of mRNA_H-paniculata_contig49011.12062.1 vs. uniprot
Match: L1J6G4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6G4_GUITC)

HSP 1 Score: 58.9 bits (141), Expect = 9.530e-9
Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 0
Query:   15 FAMGIFVHEVWVLLQHANILLNPLCQRLDRNYGVALVSLRY 55
            F   +F HEVW+ +QHAN+LLNP  QRLDR YG+AL+  R+
Sbjct:   95 FTWILFAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRF 135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49011.12062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JPB7_9PHAE7.800e-1373.81Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LAY7_ECTSI3.720e-1269.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C6P6_9STRA9.100e-1069.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3LJ98_9STRA1.450e-952.08Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A812Q1W1_9DINO3.690e-969.70Hypothetical protein n=1 Tax=Symbiodinium necroapp... [more]
A0A812Z067_9DINO3.700e-969.70Hypothetical protein n=2 Tax=unclassified Symbiodi... [more]
A0A1Q9D0R3_SYMMI3.720e-969.70Caroteno-chlorophyll a-c-binding protein n=1 Tax=S... [more]
A0A812V2L4_9DINO3.720e-969.70CER3 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A7S4KNY6_GUITH9.410e-958.54Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
L1J6G4_GUITC9.530e-958.54Uncharacterized protein n=1 Tax=Guillardia theta (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..55
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig49011contigH-paniculata_contig49011:410..574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig49011.12062.1mRNA_H-paniculata_contig49011.12062.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig49011 410..574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig49011.12062.1 ID=prot_H-paniculata_contig49011.12062.1|Name=mRNA_H-paniculata_contig49011.12062.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp
FGDDSEQSAEWSAWFAMGIFVHEVWVLLQHANILLNPLCQRLDRNYGVAL
VSLRY
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