prot_H-paniculata_contig4896.12049.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4896.12049.1
Unique Nameprot_H-paniculata_contig4896.12049.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length119
Homology
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: D7G6A7_ECTSI (Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A7_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 1.250e-63
Identity = 92/117 (78.63%), Postives = 106/117 (90.60%), Query Frame = 0
Query:    2 EHFKEVVSRAGGADELAPDGYEDAQGRWRHPHKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRDNS 118
            EHF++VVSRA GADE   +GYEDAQG WR PHKLM+V+++AGWCRVCKGLQPK+LKL+ +HPEVLCCKINK  +EELAA LGVRGLPM+IFYK GKR+DHHTTANINTIEEAIRDN+
Sbjct:   52 EHFEDVVSRAAGADEH--EGYEDAQGNWRVPHKLMMVQIHAGWCRVCKGLQPKLLKLITKHPEVLCCKINKAHHEELAAKLGVRGLPMLIFYKNGKRVDHHTTANINTIEEAIRDNT 166          
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A835Z3K6_9STRA (Thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K6_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.380e-37
Identity = 60/117 (51.28%), Postives = 83/117 (70.94%), Query Frame = 0
Query:    2 EHFKEVVSRAGGADELAPD-GYEDAQGRWRHPHKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRDN 117
            EH   +++ A   +   PD GY D  G  R PH+L++++V+A WCR C G++PK+LKL  +HPEVLCCK+NK  +E++AA LG+R LP  + YK GKRIDH TTA+I TIE+ + DN
Sbjct:   26 EHLDRILATAAQVEN--PDAGYVDHHGNQRLPHRLIMIQVHANWCRACIGVRPKLLKLCARHPEVLCCKLNKGNHEDVAARLGIRALPTFVLYKNGKRIDHFTTADIETIEQGVLDN 140          
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A7R9U8D8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8D8_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.130e-28
Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 0
Query:    1 MEHFKEVVSRAGGADELAPDGYEDAQGRWRHPHKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRDN 117
             E F  ++S A GA+ L+PD         + PHK++++ V+A WCR CK L  + LK+ K HPEVLC K+N   N E+   LG+RG+P+ I YK GKRIDH    N + +EE + DN
Sbjct:   98 QEQFDFIISHAAGANPLSPD---------QKPHKMVMLMVHATWCRKCKYLMKQYLKVAKAHPEVLCLKLNLATNAEVGKSLGIRGVPLFIIYKAGKRIDHFYAENADDLEEQVEDN 205          
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A6U1GQG8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A6U1GQG8_9CHLO)

HSP 1 Score: 67.4 bits (163), Expect = 3.890e-11
Identity = 32/97 (32.99%), Postives = 51/97 (52.58%), Query Frame = 0
Query:    1 MEHFKEVVSRAGGADELAPDGYEDAQGRWRHPHKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGK 97
            MEHF E +S AG                     +L++V+ YA WC  C+GL P++ +LMK +P++L  K+   +N+ +   LG++ LP   FY+  K
Sbjct:  102 MEHFLEQMSGAG--------------------ERLVIVDFYAHWCHACRGLYPRLARLMKDNPDILLLKVEFDSNKTITKSLGIKVLPYFHFYRGSK 178          
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A061S1S4_9CHLO (Thioredoxin-like chloroplastic-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S1S4_9CHLO)

HSP 1 Score: 66.2 bits (160), Expect = 7.730e-11
Identity = 31/84 (36.90%), Postives = 52/84 (61.90%), Query Frame = 0
Query:   34 KLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGK-RIDHHTTA--NINTIEEAI 114
            +L++V+ YA WC  C+GL P++ KLM++HP+V   K+   +N  L   LGV+ LP   FY+  + R+D  + +   I  +++AI
Sbjct:   99 RLVIVDFYATWCHACRGLYPRLSKLMEEHPDVKLLKVEFESNRSLCKSLGVKVLPFFHFYRGNEGRLDAFSASLKKIGRLKDAI 182          
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A2P6VJ39_9CHLO (Ribulose bisphosphate carboxylase small subunit, chloroplastic n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VJ39_9CHLO)

HSP 1 Score: 62.8 bits (151), Expect = 5.120e-9
Identity = 31/84 (36.90%), Postives = 49/84 (58.33%), Query Frame = 0
Query:   34 KLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYK--KGKRIDHHTTAN-INTIEEAI 114
            +L++V+ YA WC  CKG+ PK++K+M+  P VL   +N   N+ L   +GV+ LP   FY+   GK      +A  I  I++A+
Sbjct: 1149 RLVIVDFYAPWCAACKGIYPKLMKVMEDRPGVLLLTVNFDENKTLVKAMGVKVLPYFAFYRGSAGKLEGFSASAKRIGLIQDAV 1232          
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A7S2TY62_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY62_9EUKA)

HSP 1 Score: 60.5 bits (145), Expect = 1.200e-8
Identity = 32/97 (32.99%), Postives = 53/97 (54.64%), Query Frame = 0
Query:   22 YEDAQGRWRHPHKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKIN-KTANEELAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRDN 117
            +E+    ++    L+++E+YA WCR CK + PK  K  +  P+V+  ++N K     +   LG RGLP  + +K G+R+D     +   I E I+DN
Sbjct:  118 FEEILEFYKDSDTLIILELYADWCRKCKFMLPKFDKECEVQPDVMFIRMNTKVDLGYIQKTLGPRGLPSFMLFKHGQRVDAFYANSREIISEYIQDN 214          
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A7S0DHR7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DHR7_9EUKA)

HSP 1 Score: 61.2 bits (147), Expect = 1.360e-8
Identity = 30/84 (35.71%), Postives = 51/84 (60.71%), Query Frame = 0
Query:   35 LMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEE-LAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRDN 117
            L+++EVYA WCR CK + PK  K  +  PEV+  + +    ++ ++  LG+RGLP  + ++KGKR+D    +    +++ I DN
Sbjct:  243 LVLLEVYAKWCRKCKFMLPKYDKECQIQPEVMFLRWDAEKEKDYMSKVLGIRGLPAFMVFRKGKRVDVTYASKQEDLQDFILDN 326          
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A4R2T6Z8_9SPHN (Thioredoxin n=1 Tax=Sphingomonas sp. PP-F2F-A104-K0414 TaxID=2135661 RepID=A0A4R2T6Z8_9SPHN)

HSP 1 Score: 57.0 bits (136), Expect = 3.950e-8
Identity = 28/71 (39.44%), Postives = 43/71 (60.56%), Query Frame = 0
Query:   34 KLMVVEVYAGWCRVCKGLQPKILKLMKQH-PEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRIDHHT 103
            KL++V+ +A WC  CK L P +  + +    +V   K++  ANE  A  LGVRG+P++IFYK G  ++  T
Sbjct:   22 KLVLVDFWADWCGPCKALAPVLDDIAEDFGDDVSIVKLDIVANETTADRLGVRGIPLLIFYKDGIEVNRST 92          
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A3P1SYH1_9BACT (Thioredoxin n=2 Tax=Prevotella TaxID=838 RepID=A0A3P1SYH1_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 2.010e-7
Identity = 26/79 (32.91%), Postives = 50/79 (63.29%), Query Frame = 0
Query:   36 MVVEVYAGWCRVCKGLQPKILKLMKQHP-EVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRIDHHT-TANINTIEE 112
            +VV+ +A WC  C+ + P + +L ++   +++  K +    +E+AA +G+R +P IIF+K GK +D H  +A IN +++
Sbjct:   20 LVVDFWATWCGPCRMIGPLVSQLAEEFDGKIVVGKCDVEEADEVAAEMGIRNIPTIIFFKDGKEVDRHVGSAPINVLKK 98          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6A7_ECTSI1.250e-6378.63Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A835Z3K6_9STRA2.380e-3751.28Thioredoxin n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7R9U8D8_9STRA2.130e-2844.44Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U1GQG8_9CHLO3.890e-1132.99Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A061S1S4_9CHLO7.730e-1136.90Thioredoxin-like chloroplastic-like n=1 Tax=Tetras... [more]
A0A2P6VJ39_9CHLO5.120e-936.90Ribulose bisphosphate carboxylase small subunit, c... [more]
A0A7S2TY62_9EUKA1.200e-832.99Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S0DHR7_9EUKA1.360e-835.71Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A4R2T6Z8_9SPHN3.950e-839.44Thioredoxin n=1 Tax=Sphingomonas sp. PP-F2F-A104-K... [more]
A0A3P1SYH1_9BACT2.010e-732.91Thioredoxin n=2 Tax=Prevotella TaxID=838 RepID=A0A... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..118
e-value: 1.4E-22
score: 81.7
NoneNo IPR availablePANTHERPTHR43601FAMILY NOT NAMEDcoord: 33..113
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 31..114
e-value: 1.4E-17
score: 63.5
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 11..118
score: 9.477
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 31..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4896contigH-paniculata_contig4896:4170..4851 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4896.12049.1mRNA_H-paniculata_contig4896.12049.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4896 4078..6226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4896.12049.1 ID=prot_H-paniculata_contig4896.12049.1|Name=mRNA_H-paniculata_contig4896.12049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
MEHFKEVVSRAGGADELAPDGYEDAQGRWRHPHKLMVVEVYAGWCRVCKG
LQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRID
HHTTANINTIEEAIRDNS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf