mRNA_H-paniculata_contig4896.12049.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4896.12049.1
Unique NamemRNA_H-paniculata_contig4896.12049.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: D7G6A7_ECTSI (Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A7_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 6.210e-76
Identity = 114/168 (67.86%), Postives = 135/168 (80.36%), Query Frame = 2 
Query:   35 RRAETSEGVGDVPAPSASAKINDNEILYEECTRYSDKTAVAQEVILEITSMEHFKEVVSRAGGADELAPDGYEDAQGRWRHPHKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRDNS 538
            R A   E        + +AK+     LYEE +RY+D+ +VAQEVI EITS EHF++VVSRA GADE   +GYEDAQG WR PHKLM+V+++AGWCRVCKGLQPK+LKL+ +HPEVLCCKINK  +EELAA LGVRGLPM+IFYK GKR+DHHTTANINTIEEAIRDN+
Sbjct:    5 RMAAAGEAASSASGAADTAKVT----LYEEFSRYADRRSVAQEVIFEITSAEHFEDVVSRAAGADEH--EGYEDAQGNWRVPHKLMMVQIHAGWCRVCKGLQPKLLKLITKHPEVLCCKINKAHHEELAAKLGVRGLPMLIFYKNGKRVDHHTTANINTIEEAIRDNT 166
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BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A835Z3K6_9STRA (Thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K6_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.270e-45
Identity = 72/142 (50.70%), Postives = 102/142 (71.83%), Query Frame = 2 
Query:  113 LYEECTRYSDKTAVAQEVILEITSMEHFKEVVSRAGGADELAPD-GYEDAQGRWRHPHKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRDN 535
            +YEE ++Y+D  AVA + ++EITS EH   +++ A   +   PD GY D  G  R PH+L++++V+A WCR C G++PK+LKL  +HPEVLCCK+NK  +E++AA LG+R LP  + YK GKRIDH TTA+I TIE+ + DN
Sbjct:    1 MYEESSKYADPHAVATDCVVEITSNEHLDRILATAAQVEN--PDAGYVDHHGNQRLPHRLIMIQVHANWCRACIGVRPKLLKLCARHPEVLCCKLNKGNHEDVAARLGIRALPTFVLYKNGKRIDHFTTADIETIEQGVLDN 140
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BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A7R9U8D8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8D8_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.850e-38
Identity = 64/143 (44.76%), Postives = 92/143 (64.34%), Query Frame = 2 
Query:  107 EILYEECTRYSDKTAVAQEVILEITSMEHFKEVVSRAGGADELAPDGYEDAQGRWRHPHKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRDN 535
            ++ YEEC+ Y+D TA A E ++++TS E F  ++S A GA+ L+PD         + PHK++++ V+A WCR CK L  + LK+ K HPEVLC K+N   N E+   LG+RG+P+ I YK GKRIDH    N + +EE + DN
Sbjct:   72 DVYYEECSFYADATACAMETLIDVTSQEQFDFIISHAAGANPLSPD---------QKPHKMVMLMVHATWCRKCKYLMKQYLKVAKAHPEVLCLKLNLATNAEVGKSLGIRGVPLFIIYKAGKRIDHFYAENADDLEEQVEDN 205
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BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A6U1GQG8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A6U1GQG8_9CHLO)

HSP 1 Score: 70.1 bits (170), Expect = 4.370e-11
Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 2 
Query:  167 ILEITSMEHFKEVVSRAGGADELAPDGYEDAQGRWRHPHKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGK 475
            +++I SMEHF E +S AG                     +L++V+ YA WC  C+GL P++ +LMK +P++L  K+   +N+ +   LG++ LP   FY+  K
Sbjct:   96 MVDIDSMEHFLEQMSGAG--------------------ERLVIVDFYAHWCHACRGLYPRLARLMKDNPDILLLKVEFDSNKTITKSLGIKVLPYFHFYRGSK 178
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BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A061S1S4_9CHLO (Thioredoxin-like chloroplastic-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S1S4_9CHLO)

HSP 1 Score: 66.6 bits (161), Expect = 5.850e-10
Identity = 31/84 (36.90%), Postives = 52/84 (61.90%), Query Frame = 2 
Query:  284 KLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGK-RIDHHTTA--NINTIEEAI 526
            +L++V+ YA WC  C+GL P++ KLM++HP+V   K+   +N  L   LGV+ LP   FY+  + R+D  + +   I  +++AI
Sbjct:   99 RLVIVDFYATWCHACRGLYPRLSKLMEEHPDVKLLKVEFESNRSLCKSLGVKVLPFFHFYRGNEGRLDAFSASLKKIGRLKDAI 182
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BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A7S2TY62_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY62_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 4.330e-9
Identity = 38/128 (29.69%), Postives = 68/128 (53.12%), Query Frame = 2 
Query:  155 AQEVILEITSMEHFKEVVSRAGGADELAPDGYEDAQGRWRHPHKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKIN-KTANEELAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRDN 535
            +++ + E+TS++ F+E++           + Y+D+         L+++E+YA WCR CK + PK  K  +  P+V+  ++N K     +   LG RGLP  + +K G+R+D     +   I E I+DN
Sbjct:  105 SEDCVTEVTSVKMFEEIL-----------EFYKDSD-------TLIILELYADWCRKCKFMLPKFDKECEVQPDVMFIRMNTKVDLGYIQKTLGPRGLPSFMLFKHGQRVDAFYANSREIISEYIQDN 214
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BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A177WJ06_BATDL (Thioredoxin n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WJ06_BATDL)

HSP 1 Score: 62.4 bits (150), Expect = 8.650e-9
Identity = 27/84 (32.14%), Postives = 50/84 (59.52%), Query Frame = 2 
Query:  281 HKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRD 532
            +KL VV+ +A WC  CK + P+   L K+ P V   K++    + +++  GVR +P   F+KKG +++    A+IN +E+ +++
Sbjct:   19 NKLTVVDFFAEWCGPCKMVAPRFEALAKKTPNVQFLKVDVDQLQAISSKHGVRAMPTFQFFKKGSKVNEVVGADINKVEQLVKE 102
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BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A7S0DHR7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DHR7_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 2.880e-8
Identity = 38/126 (30.16%), Postives = 67/126 (53.17%), Query Frame = 2 
Query:  161 EVILEITSMEHFKEVVSRAGGADELAPDGYEDAQGRWRHPHKLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEE-LAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRDN 535
            E + EI S+E F++++           D ++D          L+++EVYA WCR CK + PK  K  +  PEV+  + +    ++ ++  LG+RGLP  + ++KGKR+D    +    +++ I DN
Sbjct:  219 ECVTEIESVEMFEKIL-----------DFHKDTD-------TLVLLEVYAKWCRKCKFMLPKYDKECQIQPEVMFLRWDAEKEKDYMSKVLGIRGLPAFMVFRKGKRVDVTYASKQEDLQDFILDN 326
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BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: A0A2P6VJ39_9CHLO (Ribulose bisphosphate carboxylase small subunit, chloroplastic n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VJ39_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 4.840e-8
Identity = 31/84 (36.90%), Postives = 49/84 (58.33%), Query Frame = 2 
Query:  284 KLMVVEVYAGWCRVCKGLQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYK--KGKRIDHHTTAN-INTIEEAI 526
            +L++V+ YA WC  CKG+ PK++K+M+  P VL   +N   N+ L   +GV+ LP   FY+   GK      +A  I  I++A+
Sbjct: 1149 RLVIVDFYAPWCAACKGIYPKLMKVMEDRPGVLLLTVNFDENKTLVKAMGVKVLPYFAFYRGSAGKLEGFSASAKRIGLIQDAV 1232
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BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Match: UPI001FAC86D3 (thioredoxin n=1 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FAC86D3)

HSP 1 Score: 57.8 bits (138), Expect = 1.540e-7
Identity = 26/85 (30.59%), Postives = 51/85 (60.00%), Query Frame = 2 
Query:  284 KLMVVEVYAGWCRVCKGLQPKILKLMKQ--HPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRIDHHTTANINTIEEAIRD 532
            KL+VV+  A WC  CK + P  ++L +Q  + EV+  K++    +++++  G++ +P   FYK GK +   + AN+ T+E  +++
Sbjct:   21 KLVVVDFTATWCGPCKQIGPHFVRLSEQSENKEVIFLKVDVDDADDVSSNCGIKCMPTFHFYKNGKMVFEFSGANLETLENKLKE 105
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4896.12049.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6A7_ECTSI6.210e-7667.86Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A835Z3K6_9STRA1.270e-4550.70Thioredoxin n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A7R9U8D8_9STRA3.850e-3844.76Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U1GQG8_9CHLO4.370e-1133.01Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A061S1S4_9CHLO5.850e-1036.90Thioredoxin-like chloroplastic-like n=1 Tax=Tetras... [more]
A0A7S2TY62_9EUKA4.330e-929.69Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A177WJ06_BATDL8.650e-932.14Thioredoxin n=2 Tax=Batrachochytrium dendrobatidis... [more]
A0A7S0DHR7_9EUKA2.880e-830.16Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A2P6VJ39_9CHLO4.840e-836.90Ribulose bisphosphate carboxylase small subunit, c... [more]
UPI001FAC86D31.540e-730.59thioredoxin n=1 Tax=Girardinichthys multiradiatus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4896contigH-paniculata_contig4896:4078..6226 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score202.6
Seed ortholog evalue1e-49
Seed eggNOG ortholog2880.D7G6A7
KEGG koko:K03671
KEGG Pathwayko04621,ko05418,map04621,map05418
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein-disulfide reductase activity
EggNOG OGsKOG0908@1,KOG0908@2759
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-10_001160.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Exons4
Model size633
Cds size357
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4896.12049.1prot_H-paniculata_contig4896.12049.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4896 4170..4851 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930446.291367-UTR-H-paniculata_contig4896:4077..41691622930446.291367-UTR-H-paniculata_contig4896:4077..4169Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4896 4078..4169 -
1691481296.007812-UTR-H-paniculata_contig4896:4077..41691691481296.007812-UTR-H-paniculata_contig4896:4077..4169Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4896 4078..4169 -
1622930446.3364458-UTR-H-paniculata_contig4896:4851..48601622930446.3364458-UTR-H-paniculata_contig4896:4851..4860Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4896 4852..4860 -
1691481296.044318-UTR-H-paniculata_contig4896:4851..48601691481296.044318-UTR-H-paniculata_contig4896:4851..4860Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4896 4852..4860 -
1622930446.3564162-UTR-H-paniculata_contig4896:5160..52291622930446.3564162-UTR-H-paniculata_contig4896:5160..5229Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4896 5161..5229 -
1691481296.0595977-UTR-H-paniculata_contig4896:5160..52291691481296.0595977-UTR-H-paniculata_contig4896:5160..5229Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4896 5161..5229 -
1622930446.373183-UTR-H-paniculata_contig4896:6120..62261622930446.373183-UTR-H-paniculata_contig4896:6120..6226Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4896 6121..6226 -
1691481296.06939-UTR-H-paniculata_contig4896:6120..62261691481296.06939-UTR-H-paniculata_contig4896:6120..6226Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4896 6121..6226 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930446.3093312-CDS-H-paniculata_contig4896:4169..42981622930446.3093312-CDS-H-paniculata_contig4896:4169..4298Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4896 4170..4298 -
1691481296.0220404-CDS-H-paniculata_contig4896:4169..42981691481296.0220404-CDS-H-paniculata_contig4896:4169..4298Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4896 4170..4298 -
1622930446.3245041-CDS-H-paniculata_contig4896:4623..48511622930446.3245041-CDS-H-paniculata_contig4896:4623..4851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4896 4624..4851 -
1691481296.033021-CDS-H-paniculata_contig4896:4623..48511691481296.033021-CDS-H-paniculata_contig4896:4623..4851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4896 4624..4851 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4896.12049.1

>prot_H-paniculata_contig4896.12049.1 ID=prot_H-paniculata_contig4896.12049.1|Name=mRNA_H-paniculata_contig4896.12049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=119bp
MEHFKEVVSRAGGADELAPDGYEDAQGRWRHPHKLMVVEVYAGWCRVCKG
LQPKILKLMKQHPEVLCCKINKTANEELAAYLGVRGLPMIIFYKKGKRID
HHTTANINTIEEAIRDNS*
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mRNA from alignment at H-paniculata_contig4896:4078..6226-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4896.12049.1 ID=mRNA_H-paniculata_contig4896.12049.1|Name=mRNA_H-paniculata_contig4896.12049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2149bp|location=Sequence derived from alignment at H-paniculata_contig4896:4078..6226- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCTGCTTGCCACCTTTCTAGGCCTTGCGTTGCACGAAGGGCTGAAACAA
GTGAAGGGGTTGGAGACGTTCCAGCACCATCAGCATCGGCGAAGATAAAT
GATAATGTGAGCATTGGACTCCCTGGAGAGCATGGCCATCAACATGAACG
GTGCGACCGTACGACTGTGCACTTGCGTTTTATGATAAGATGTACAGTCA
CCGCGTGATCAGCAAACCCACTCTACTGTGTTCCATCGCCAGCTATTCTG
CATATTGTCGGCGGCATCCAGGCCTACACTGAAAGAATCCTGGCTCAGCT
AAAGATGGGCAATGGGAACCCGGGGCTAAGTAGTTACACTCTGTACGGTA
GGATTTTTTGTAGCTCAGGGCGAAAGGGGAAGCGGAAGCAAGCAATACAT
TAGTACGGCTGAACACTTTTTTTTCGTGTCGCTGCACGGAGCGGTGGAAC
ATGAAGTACGGAGATGAAGGAAAAAGCACCTAAAAAGTTAGATTAAACAC
ATGGGTAATATTGGTTACTTGTACAGCTGTCATCGCGCTTTGAAATGAGC
GGGCCCATGAACCGAGACACCCTCCAGAAGACGACGCGGCATCCAGTAGA
GCTGTTCGAACGCTGTGCACGGCTAATGTATGGTAAGAAAAAAAAAAAAA
AAAGTATGGTAAGATGAGACCACGAAAAACCTATTAGGTCGAGTCGTAAG
AATGGCACGAATAGCTCCCAGCATAAACAGTTTGGCCATCATGGCACCTA
GCACATGCAGGTGGGTTGTTCCTCACCCCGGGTGTTGATGAACGGTCGAA
CCTGCCGCGTGAAGGGGTGAAATTCCGGGAAATAATCAAACCGAGGTTCT
TGAATGACCTGTGAATTAGGAGGCAAGGATGCCCATATGCATACGGGTGA
ACCAAGGAAATGAGACCATTTTTTATTTTGTCTGCAGGCGTGCTAACACG
TGAAGAAAATAAATCTAATTTCCCTCCCCCATGCTGCTTTGCTGCAGGAG
ATACTATACGAAGAGTGTACGAGGTATTCAGATAAAACCGCCGTGGCCCA
GGAAGTCATCCTTGAGGTGGGTTAAACGTTTCCAACGGTTGTCGGTACAG
TAACCTTGAGCGTTTTGTAGAACTATCTTTTCCATCGTGTCCGACAGTGA
CCGTATATCAGTTGACGCCCAAACGTCCGGAAGCTACCTAGGTAGAGGGG
GGGGAAGAACGCCATCTGAAAGCACCAAGTGAGACTACGATACGCAGCTT
TCAAAATGGGCTACGGAATACCATCGCCTGTCTCTTTCCAGCGCCAGCTT
ATTCCGCATTGTGGGCGAACGGGAAGACATGGCTTTGCCCTCTATAACTT
GGTTATGCGAACCCAGATCACATCCATGGAGCATTTCAAAGAGGTGGTGT
CTAGAGCAGGAGGGGCGGATGAGTTAGCGCCGGATGGGTATGAAGACGCT
CAGGGTAGGTGGCGGCATCCACATAAGCTAATGGTGGTGGAGGTGTACGC
CGGCTGGTGTCGAGTTTGCAAGGGCCTCCAACCCAAGATTCTGAAGCTCA
TGAAGCAACATCCAGAGGTGCTCTGCTGCAAAATCAACAAGACAGCAAAC
GAGGTAAGCACTTCCATACAACTACAAGCCTGACGAACGATTAAAAAAAA
GAAAAGCATGCCTCTACCGCATTGGCATGACTCGACGTCATGGCCCGCGC
CATCAGTTAAGACATGTCTACAACTTGCCTCCCACAAACGAATCGAGTGT
CCTGTCTGGTAATCGTTCGGTGTCTGATCATGAAATCACATCTGAACCCA
TCCGTATCGGCCAAATTTCTCTACAACCAAACCCCGTTGTCAGCAAAACG
CCGCCGGGCGTCTTTACAATAAACACCCTCTTGCCCTCCACACGCTTGTT
TCCTTTCACGGTTTTGACCTCCCAACAGGAGCTGGCTGCCTACCTCGGCG
TGCGTGGGCTGCCCATGATCATATTCTACAAGAAAGGCAAACGGATCGAT
CACCATACAACAGCAAACATCAACACAATCGAGGAGGCAATCAGGGACAA
CTCTTGAATGAATCAAATCGGTTTCGTTTTTTTATTAACTAGAGAAAATT
TACAGTTGGGGCATGCGCACTCAACAGGAATGTAGTGCGTGTTCCCCCA
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Coding sequence (CDS) from alignment at H-paniculata_contig4896:4078..6226-

>mRNA_H-paniculata_contig4896.12049.1 ID=mRNA_H-paniculata_contig4896.12049.1|Name=mRNA_H-paniculata_contig4896.12049.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=714bp|location=Sequence derived from alignment at H-paniculata_contig4896:4078..6226- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGCATTTCAAAGAGGTGGTGTCTAGAGCAGGAGGGGCGGATGAGTT
AGCGCCGGATGGGTATGAAGACGCTCAGGGTAGGTGGCGGCATCCACATA
AGCTAATGGTGGTGGAGGTGTACGCCGGCTGGTGTCGAGTTTGCAAGGGC
CTCCAACCCAAGATTCTGAAGCTCATGAAGCAACATCCAGAGGTGCTCTG
CTGCAAAATCAACAAGACAGCAAACGAGATGGAGCATTTCAAAGAGGTGG
TGTCTAGAGCAGGAGGGGCGGATGAGTTAGCGCCGGATGGGTATGAAGAC
GCTCAGGGTAGGTGGCGGCATCCACATAAGCTAATGGTGGTGGAGGTGTA
CGCCGGCTGGTGTCGAGTTTGCAAGGGCCTCCAACCCAAGATTCTGAAGC
TCATGAAGCAACATCCAGAGGTGCTCTGCTGCAAAATCAACAAGACAGCA
AACGAGGAGCTGGCTGCCTACCTCGGCGTGCGTGGGCTGCCCATGATCAT
ATTCTACAAGAAAGGCAAACGGATCGATCACCATACAACAGCAAACATCA
ACACAATCGAGGAGGCAATCAGGGACAACTCTTGAGAGCTGGCTGCCTAC
CTCGGCGTGCGTGGGCTGCCCATGATCATATTCTACAAGAAAGGCAAACG
GATCGATCACCATACAACAGCAAACATCAACACAATCGAGGAGGCAATCA
GGGACAACTCTTGA
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