prot_H-paniculata_contig48782.12014.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig48782.12014.1 vs. uniprot
Match: K8YS61_NANGC (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YS61_NANGC) HSP 1 Score: 64.3 bits (155), Expect = 1.330e-10 Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = 0
Query: 1 LLHERLGHVR--------DLPAVARQQGIRLSEKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVD-KSFGGCRFAIIFVD 81
L H+R GH+ ++ +GI+ K GVC+ CE+ K +K+ ER EPLELVHTD+ GPV+ +S GG R+AI F D
Sbjct: 3 LWHQRFGHINYEYLRQMGEIDDTGVPKGIK---KPGVCATCERAKHTKKSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTD 89
BLAST of mRNA_H-paniculata_contig48782.12014.1 vs. uniprot
Match: W7TGQ6_9STRA (Retrotransposon unclassified n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGQ6_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.910e-10 Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 0
Query: 1 LLHERLGHVR--------DLPAVARQQGIRLSEKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVD-KSFGGCRFAIIFVD 81
L H+R GH+ ++ +GI+ K GVC CE+ K +K+ ER EPLELVHTD+ GPV+ +S GG R+AI F D
Sbjct: 23 LWHQRFGHMNYEYLRQMGEIDGTGVPKGIK---KPGVCGTCERAKQTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTD 109
BLAST of mRNA_H-paniculata_contig48782.12014.1 vs. uniprot
Match: W7TIQ5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIQ5_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.470e-10 Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 0
Query: 1 LLHERLGHVR--------DLPAVARQQGIRLSEKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVD-KSFGGCRFAIIFVD 81
L H+R GH+ ++ +GI+ K GVC CE+ K +K+ ER EPLELVHTD+ GPV+ +S GG R+AI F D
Sbjct: 23 LWHQRFGHMNYEYLRQMGEIDGTGVPKGIK---KPGVCGTCERAKQTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTD 109
BLAST of mRNA_H-paniculata_contig48782.12014.1 vs. uniprot
Match: A0A0V1NJF3_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella sp. T8 TaxID=92180 RepID=A0A0V1NJF3_9BILA) HSP 1 Score: 64.3 bits (155), Expect = 3.540e-10 Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 0
Query: 3 HERLGHV--RDLPAVARQQ---GIRLS-EKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFGGCRFAIIFVD 81
H RLGH+ R L + R + G+++ EKL VC C KGK ++ P K + +R PLEL+HTDI GP+ S GG ++ + F+D
Sbjct: 382 HRRLGHLNERSLLELTRHEKVFGMKVGKEKLPVCEICIKGKQTQSPFPKNQAKRRCRPLELIHTDICGPMRQNSIGGSKYFVTFID 467
BLAST of mRNA_H-paniculata_contig48782.12014.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.540e-10 Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 0
Query: 1 LLHERLGHVR--------DLPAVARQQGIRLSEKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVD-KSFGGCRFAIIFVD 81
L H+R GH+ ++ +GI+ K GVC CE+ K +K+ ER EPLELVHTD+ GPV+ +S GG R+AI F D
Sbjct: 69 LWHQRFGHINYEYLKQMGEIDDTGVPKGIK---KPGVCGTCERAKQTKKSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTD 155
BLAST of mRNA_H-paniculata_contig48782.12014.1 vs. uniprot
Match: A0A0V0T740_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Trichinella TaxID=6333 RepID=A0A0V0T740_9BILA) HSP 1 Score: 64.3 bits (155), Expect = 3.580e-10 Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 0
Query: 3 HERLGHV--RDLPAVARQQ---GIRLS-EKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFGGCRFAIIFVD 81
H RLGH+ R L + R + G+++ EKL VC C KGK ++ P K + +R PLEL+HTDI GP+ S GG ++ + F+D
Sbjct: 612 HRRLGHLNERSLLELTRHEKVFGMKVGKEKLPVCEICIKGKQTQSPFPKNQAKRRCRPLELIHTDICGPMRQNSIGGSKYFVTFID 697
BLAST of mRNA_H-paniculata_contig48782.12014.1 vs. uniprot
Match: W7T9I7_9STRA (Copia-like retrotransposable element n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9I7_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.750e-10 Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 0
Query: 1 LLHERLGHVR--------DLPAVARQQGIRLSEKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPVD-KSFGGCRFAIIFVD 81
L H+R GH+ ++ +GI+ K G+C+ CE+ K +K+ ER EPLELVHTD+ GPV+ +S GG R+AI F D
Sbjct: 73 LWHQRFGHINYEYLRQMGEIDDTGVPKGIK---KPGICATCERAKHTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTD 159
BLAST of mRNA_H-paniculata_contig48782.12014.1 vs. uniprot
Match: A0A0V1GS48_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Trichinella TaxID=6333 RepID=A0A0V1GS48_9BILA) HSP 1 Score: 63.5 bits (153), Expect = 6.670e-10 Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 0
Query: 3 HERLGHV--RDLPAVARQQ---GIRLS-EKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFGGCRFAIIFVD 81
H RLGH+ R L + + + G+++ EKL +C C KGK ++ P K + +R PLEL+HTDI GP+ S GG ++ + F+D
Sbjct: 477 HRRLGHLNERSLQELTKHEKVFGMKVGKEKLPICEICIKGKQTQSPFPKSQTKRRCRPLELIHTDICGPMRQNSIGGSKYFVTFID 562
BLAST of mRNA_H-paniculata_contig48782.12014.1 vs. uniprot
Match: A0A0V0ZEH1_9BILA (Copia protein (Fragment) n=3 Tax=Trichinella TaxID=6333 RepID=A0A0V0ZEH1_9BILA) HSP 1 Score: 63.2 bits (152), Expect = 9.020e-10 Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 0
Query: 3 HERLGHVRD--LPAVARQQ---GIRLS-EKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFGGCRFAIIFVD 81
H RLGH+ + L + R + G+++ EKL VC C KGK ++ P K + +R PLEL+HTDI GP+ S GG ++ + F+D
Sbjct: 297 HRRLGHLNEKSLLELTRHEKVFGMKVGKEKLPVCEICIKGKQTQSPFPKSQTKRRCRPLELIHTDICGPMRQNSIGGSKYFVAFID 382
BLAST of mRNA_H-paniculata_contig48782.12014.1 vs. uniprot
Match: A0A0V0RKA4_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella nelsoni TaxID=6336 RepID=A0A0V0RKA4_9BILA) HSP 1 Score: 61.6 bits (148), Expect = 3.020e-9 Identity = 33/86 (38.37%), Postives = 50/86 (58.14%), Query Frame = 0
Query: 3 HERLGHVRDLPAVA-----RQQGIRLS-EKLGVCSACEKGKASKQPVKKYREERTTEPLELVHTDIAGPV-DKSFGGCRFAIIFVD 81
H RLGH+ + + + G+++ EKL VC C KGK ++ P K + +R PLEL+HTDI GP+ S GG ++ + F+D
Sbjct: 4 HRRLGHLNERSLLELTWHEKVFGMKVGKEKLPVCEICIKGKQTQSPFPKSQTKRRCRPLELIHTDICGPMRQNSIGGSKYFVTFID 89 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig48782.12014.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig48782.12014.1 ID=prot_H-paniculata_contig48782.12014.1|Name=mRNA_H-paniculata_contig48782.12014.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=81bpback to top |