prot_H-paniculata_contig484.11954.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig484.11954.1
Unique Name	prot_H-paniculata_contig484.11954.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	85

Homology

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BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.880e-15
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0

Query:    1 LIALDYTNAFNSVKRSAILEEVAILTPGLTPFVAKCYGEKPADIIFQINTGKSRKISSNTGIHQGDGLGPALFCMPVGSILCK 83
            ++  D +NAFN+ KR+AI+ + A   P L  ++A+CY E PA  I+ +++G+ R I   +G+ QGDG+GP LFC  +  I+ K
Sbjct:  139 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 221

[Close]

BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.980e-15
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0

Query:    1 LIALDYTNAFNSVKRSAILEEVAILTPGLTPFVAKCYGEKPADIIFQINTGKSRKISSNTGIHQGDGLGPALFCMPVGSILCK 83
            ++  D +NAFN+ KR+AI+ + A   P L  ++A+CY E PA  I+ +++G+ R I   +G+ QGDG+GP LFC  +  I+ K
Sbjct:  138 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLK 220

[Close]

BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot
Match: A0A6H5KJS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS3_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 4.030e-15
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0

Query:    1 LIALDYTNAFNSVKRSAILEEVAILTPGLTPFVAKCYGEKPADIIFQINTGKSRKISSNTGIHQGDGLGPALFCMPVGSILCK 83
            +I  D +N FN+ KR+AI+ + A   P L  ++A+CY E PA  I+ +++G+ R I   +G+ QGDG+GP LFC  + +I+ K
Sbjct:  712 VIQTDCSNTFNTGKRTAIMAQAATSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVAIILK 794

[Close]

BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 7.440e-15
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0

Query:    1 LIALDYTNAFNSVKRSAILEEVAILTPGLTPFVAKCYGEKPADIIFQINTGKSRKISSNTGIHQGDGLGPALFCMPVGSILCK 83
            ++  D +NAFN+ KR+AI+ + A   P L  ++A+CY E PA  I+ +++G+ R I   +G+ QGDG+GP LFC  +  I+ K
Sbjct:   54 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 136

[Close]

BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 7.480e-15
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0

Query:    1 LIALDYTNAFNSVKRSAILEEVAILTPGLTPFVAKCYGEKPADIIFQINTGKSRKISSNTGIHQGDGLGPALFCMPVGSILCK 83
            ++  D +NAFN+ KR+AI+ + A   P L  ++A+CY E PA  I+ +++G+ R I   +G+ QGDG+GP LFC  +  I+ K
Sbjct:  533 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 615

[Close]

BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 7.490e-15
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0

Query:    1 LIALDYTNAFNSVKRSAILEEVAILTPGLTPFVAKCYGEKPADIIFQINTGKSRKISSNTGIHQGDGLGPALFCMPVGSILCK 83
            ++  D +NAFN+ KR+AI+ + A   P L  ++A+CY E PA  I+ +++G+ R I   +G+ QGDG+GP LFC  +  I+ K
Sbjct:  514 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLK 596

[Close]

BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot
Match: A0A6H5JEJ4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ4_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 7.500e-15
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0

Query:    1 LIALDYTNAFNSVKRSAILEEVAILTPGLTPFVAKCYGEKPADIIFQINTGKSRKISSNTGIHQGDGLGPALFCMPVGSILCK 83
            ++  D +NAFN+ KR+AI+ + A   P L  ++A+CY E PA  I+ +++G+ R I   +G+ QGDG+GP LFC  +  I+ K
Sbjct:   13 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 95

[Close]

BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 7.510e-15
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0

Query:    1 LIALDYTNAFNSVKRSAILEEVAILTPGLTPFVAKCYGEKPADIIFQINTGKSRKISSNTGIHQGDGLGPALFCMPVGSILCK 83
            ++  D +NAFN+ KR+AI+ + A   P L  ++A+CY E PA  I+ +++G+ R I   +G+ QGDG+GP LFC  +  I+ K
Sbjct:  528 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 610

[Close]

BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 7.520e-15
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0

Query:    1 LIALDYTNAFNSVKRSAILEEVAILTPGLTPFVAKCYGEKPADIIFQINTGKSRKISSNTGIHQGDGLGPALFCMPVGSILCK 83
            ++  D +NAFN+ KR+AI+ + A   P L  ++A+CY E PA  I+ +++G+ R I   +G+ QGDG+GP LFC  +  I+ K
Sbjct:  146 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSK 228

[Close]

BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 7.590e-15
Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0

Query:    1 LIALDYTNAFNSVKRSAILEEVAILTPGLTPFVAKCYGEKPADIIFQINTGKSRKISSNTGIHQGDGLGPALFCMPVGSILCK 83
            ++  D +NAFN+ KR+AI+ + A   P L  ++A+CY E PA  I+ +++G+ R I   +G+ QGDG+GP LFC  +  I+ K
Sbjct:  507 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLK 589

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig484.11954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L4Y4_9PHAE	1.880e-15	40.96	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5LL14_9PHAE	3.980e-15	40.96	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KJS3_9PHAE	4.030e-15	40.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KYJ9_9PHAE	7.440e-15	40.96	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KJC0_9PHAE	7.480e-15	40.96	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5KA96_9PHAE	7.490e-15	40.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JEJ4_9PHAE	7.500e-15	40.96	DDE-1 domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JI32_9PHAE	7.510e-15	40.96	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JLG6_9PHAE	7.520e-15	40.96	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KMQ2_9PHAE	7.590e-15	40.96	Reverse transcriptase domain-containing protein n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..84 score: 9.942

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig484	contig	H-paniculata_contig484:35846..36100 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig484.11954.1	mRNA_H-paniculata_contig484.11954.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig484 35846..36100 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig484.11954.1 ID=prot_H-paniculata_contig484.11954.1|Name=mRNA_H-paniculata_contig484.11954.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp
LIALDYTNAFNSVKRSAILEEVAILTPGLTPFVAKCYGEKPADIIFQINT
GKSRKISSNTGIHQGDGLGPALFCMPVGSILCKN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000477	RT_dom