prot_H-paniculata_contig4740.11778.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4740.11778.1
Unique Nameprot_H-paniculata_contig4740.11778.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length453
Homology
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BLAST of mRNA_H-paniculata_contig4740.11778.1 vs. uniprot
Match: A0A6H5LM15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LM15_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 8.310e-16
Identity = 46/82 (56.10%), Postives = 55/82 (67.07%), Query Frame = 0 
Query:  219 REEFRSAVRSGLLLHLCPPRGQFADLFGIEEVLRWHVLGMLSAKDLAVFGMTSRAADSTSISDFLWTPLVTAEFPTRVQEVL 300
            +E FRS V SGLLLHLCPP G FADL G  + L  HVLGML A+DLA+ G+T RAA  +  +D LW  LV A+F  R Q  +
Sbjct:  234 QEAFRSRVVSGLLLHLCPPPGHFADLLGCGDELLRHVLGMLGARDLAMVGLTGRAAAVSVAADCLWAKLVAADFSEREQHAV 315
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4740.11778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LM15_9PHAE8.310e-1656.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4740contigH-paniculata_contig4740:10230..14065 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4740.11778.1mRNA_H-paniculata_contig4740.11778.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4740 10190..14065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4740.11778.1 ID=prot_H-paniculata_contig4740.11778.1|Name=mRNA_H-paniculata_contig4740.11778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=453bp
MVNVNSMEGSYDMAEDHWEQEENQHGLLLRSLHEEFLNYGLCPDDFNSNE
HNTDDSHNIINNNSGSSSGGGIDMDSGGCTMPFVPSATGAFITLRYIHRF
NRIVEVRALTMFGDLIVQATTSPRALVMPPTRKGADASTDRSNGEGASGG
DEGSCDGDGIVSRTITFDVERWLPRRGQVEEKVEQRTPQEKEGEEGKEEQ
DESVPAVVAPTTTIPLDLREEFRSAVRSGLLLHLCPPRGQFADLFGIEEV
LRWHVLGMLSAKDLAVFGMTSRAADSTSISDFLWTPLVTAEFPTRVQEVL
SSDDDWVSYRSPQPPSEERKENCERAIPGNKGKRGKKSGNSNNNNNDDDD
EGHHLRVGLRDGRRGTSRRLYATFHHERSEFLSLVDDRNHPSRTLILLPA
EARFNGDVAHTSYARHLSLRGYPTFDPEFPEYSWGPGIGGARAGGSARIG
RWV
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