prot_H-paniculata_contig4732.11762.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4732.11762.1
Unique Nameprot_H-paniculata_contig4732.11762.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length511
Homology
BLAST of mRNA_H-paniculata_contig4732.11762.1 vs. uniprot
Match: A0A6H5KD05_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD05_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 2.180e-115
Identity = 278/592 (46.96%), Postives = 320/592 (54.05%), Query Frame = 0
Query:   38 KTKFSKRPTRGMKAAPAYMSFDDVDVEDDDSDGELFIEESCD-----AGPARS---------SSRSPGGNSYNATPSVYRAPSTALQPPQSPLVAFRTADPEAPAAPA-ADAPAVGELGSGIRRGDSDMDV------EQPGEEKGVTGGAGLQMHGAHPGYR---------------MSIPRDPSALTDGGRPHAQSITESFHGYKGYPGYEPDTPVNAQLPHASNRPISTDSLSIRAPPVEGDRRDQHDGEGAPTPS---IAYRQQYSARGAGPSSVTP-----GNYGRGGSMASDIAEG------------------------------PPQSISPSGT--MEMASV-------GGDSHLRPLSTTQSQLQHLTPGTRLSYGSRSGSVYR-------------------------------PSPA----NSIASSFRRGDDGRSIPPMPSEDGMGSVLGT-IGGDEATNEDLQWKRSALKKFHKVMVKGEGLRVVKHNRSGGSQVRIIRYDPDIKALVWNSKRYMKKAGSANVPIVGIKRVGREGNTVSVTAAGRGTIGFEPQRIRDAKILAEALRALVDKEERSAMWRG 510
            KTKFSKR +RG+KAA AYMSFDDVDVEDDDSDGELF+E+S D     +G ARS         SS+S    + NA PSVYRAPS  L PP         +       P   D  +    G G   G S + V      E     + + G +  ++  +  G R                SIPRD S L +  RPH QS  ESFHGYKGYPGYEPDTPV  QL     R  +TD+L+I       D R  H G   PTPS      R+   + G G SS+TP       + +        A G                                  ISPSGT  MEMA+        G  + +          +H    T LS    +G V                                 PSP+    NS++SS+R       I  + SEDGMGSVLGT +G ++++NEDLQWKRSALKKFHKVMVKGEGLRVVKHNRSGGSQ+RIIRYDP+IKALVWNSKRYMKKAGSANVPIVGIKRVGREGNTVSVTAAGRGTIGFEPQRIRDAKILAEALRALVDKEERSAMWRG
Sbjct:   25 KTKFSKRASRGLKAASAYMSFDDVDVEDDDSDGELFVEDSRDNDKRASGAARSPVSFAAQAASSKSASAYTVNA-PSVYRAPS--LAPPXXXXXXXXXSSDAPTGGPEDQDGYSAAAAGRGGSDGSSGVPVAAVSAKENMSSHRAIAGDSSAEIWSSGSGLRGGLAGGLRLGGEQRVTSIPRDGSML-ESARPHGQS--ESFHGYKGYPGYEPDTPVAQQLTQPG-RAHATDALTINPGADVSDPRTTHAGAAGPTPSSVRFTPREMEVSSGIG-SSMTPVEREEQQHYQXXXXXXXXASGMDIDGRDEYVEEQQXXXXXXXXXXXXXXXXXQPVISPSGTTSMEMATGLRPPEPRGRAAEVEQYDVDVGNGRHSNTNTGLSSRGGTGGVPMSSTXXXXXXXXXXXXXXENNXXXXXXXXHVVPSPSHSQTNSMSSSYRN------IQQLRSEDGMGSVLGTLVGTEDSSNEDLQWKRSALKKFHKVMVKGEGLRVVKHNRSGGSQMRIIRYDPEIKALVWNSKRYMKKAGSANVPIVGIKRVGREGNTVSVTAAGRGTIGFEPQRIRDAKILAEALRALVDKEERSAMWRG 602          
BLAST of mRNA_H-paniculata_contig4732.11762.1 vs. uniprot
Match: D8LTK7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK7_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 7.130e-93
Identity = 235/482 (48.76%), Postives = 272/482 (56.43%), Query Frame = 0
Query:   56 MSFDDVDVEDDDSDGELFIEESCD---AGPARS---------SSRSPGGNSYNATPSVYRAPSTAL---------------------QPPQSPLVAFRTADPEAPAAPAADAPAVGELGSGIRR--GDSDMDVEQPGEEKGVTGG--AGLQMHGAHPGYRMSIPRDPSALTDGGRPHAQSITESFHGYKGYPGYEPDTPVNAQLPHASNRPISTDSLSIRAPPVEGDRRDQHDGEGAPTPS-IAYRQQYSARGAGPSSVTPGNYGRGGSMAS--------DIAEGPPQSISPSGTMEMASVGGDSHLRPLSTTQSQLQHLTPGTRLSYGSRSGSVYR----PSP----ANSIASSFRRGDDGRSIPPMPSEDGMGSVLGTIGGDE-ATNEDLQWKRSALKKFHKVMVKGEGLRVVKHNRSGGSQVRIIRYDPDIKALVWNSKRYMKKAGSANVPIVGIKRVGREGNTVSVTAAGRGTIGFEP 482
            MSFDDVDVEDDDSDGELF+E+S D   +G +RS         SS+S    + NA PSVYRAPS A                      Q   S   A R  D  +   P A A +  E  S  +   GDS  ++   G   G+ GG   GL++ G      MSIPRD S L +  RPH QS  ESFHGYKGYPGYEPDTPV  QL     R  +TD+L+I       D R +H G   PTPS + +     A G  P    P   GR   +          D+ +G   S + +G       GG     P+S+T                +           PSP    ANS++SS+R       I  + SEDGMGSVLGT+ G E +TNEDLQWKRSALKKFHKVMVKGEGLRVVKHNRSGGSQ+RIIRYDP+IKALVWNSKRYMKKAGSANVPIVGIKRVGREGNTVSVTAAGRGTIGFEP
Sbjct:    1 MSFDDVDVEDDDSDGELFVEDSRDNRGSGASRSPGSVAAQAASSKSASAYTVNA-PSVYRAPSLAPXXXXXXXXXXXSDAPAGGPEDQEGYSAAAAGRGEDDGSSGVPVAVAASAKENMSSHQAIAGDSSAEILSSGS--GLRGGLAGGLRLGGEQ--RVMSIPRDGSML-ESARPHGQS--ESFHGYKGYPGYEPDTPVAQQLTQPG-RAHATDALTINPGADVSDPRTKHAGAAGPTPSSVRFTPMEMATGLRP----PEPRGRAAQVEVATRQQHDVDVGDGR-HSNTNTGLSSRGGTGGV----PMSSTXXXXXXXXXXXXXXENNXXXXXXXXHVVPSPSHSQANSMSSSYRN------IQQLRSEDGMGSVLGTLAGTEDSTNEDLQWKRSALKKFHKVMVKGEGLRVVKHNRSGGSQMRIIRYDPEIKALVWNSKRYMKKAGSANVPIVGIKRVGREGNTVSVTAAGRGTIGFEP 458          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4732.11762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KD05_9PHAE2.180e-11546.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTK7_ECTSI7.130e-9348.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 485..505

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4732contigH-paniculata_contig4732:709..14092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4732.11762.1mRNA_H-paniculata_contig4732.11762.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4732 581..15195 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4732.11762.1 ID=prot_H-paniculata_contig4732.11762.1|Name=mRNA_H-paniculata_contig4732.11762.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=511bp
MADDQDVVVAIAAHGEANAAGGGGDGGGGNSNAKASVKTKFSKRPTRGMK
AAPAYMSFDDVDVEDDDSDGELFIEESCDAGPARSSSRSPGGNSYNATPS
VYRAPSTALQPPQSPLVAFRTADPEAPAAPAADAPAVGELGSGIRRGDSD
MDVEQPGEEKGVTGGAGLQMHGAHPGYRMSIPRDPSALTDGGRPHAQSIT
ESFHGYKGYPGYEPDTPVNAQLPHASNRPISTDSLSIRAPPVEGDRRDQH
DGEGAPTPSIAYRQQYSARGAGPSSVTPGNYGRGGSMASDIAEGPPQSIS
PSGTMEMASVGGDSHLRPLSTTQSQLQHLTPGTRLSYGSRSGSVYRPSPA
NSIASSFRRGDDGRSIPPMPSEDGMGSVLGTIGGDEATNEDLQWKRSALK
KFHKVMVKGEGLRVVKHNRSGGSQVRIIRYDPDIKALVWNSKRYMKKAGS
ANVPIVGIKRVGREGNTVSVTAAGRGTIGFEPQRIRDAKILAEALRALVD
KEERSAMWRG*
back to top