prot_H-paniculata_contig469.11679.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig469.11679.1
Unique Nameprot_H-paniculata_contig469.11679.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1833
Homology
BLAST of mRNA_H-paniculata_contig469.11679.1 vs. uniprot
Match: D8LM78_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM78_ECTSI)

HSP 1 Score: 1009 bits (2610), Expect = 0.000e+0
Identity = 801/1857 (43.13%), Postives = 976/1857 (52.56%), Query Frame = 0
Query:  108 LLRPVLDFLLMAAALLP--LHFVLGQRIVVGEDSPK--EQVWARVTRGVYIAWLTHAAGLMDEMLRVFLGIRLTMGLGTPASVDKVYSKMSRRAEVVAEGITVDDFPALASLYAGGA------QSVRDPQRASSGEIGGGDGSA-----AEEARAQ---SLVMKVDCVAVTARLWSLVPWSRVRQYDKVHLKGITLRLRQVNGILNFSFLALRES---------------------------PGYTSGSDEGTGAGGGVKVGNNSSINGRSSTNRNNSSSVVGGEGSRSG-SMEDLDGI-VFAEATTDDEGEEELSREQDLMAEEAMDPPS-SPRDSVDTNNTFTGGASEG--------GASSSSTSRLSLLGRGRFSGRSRRIAAPWATGVKGQQSDVETAAAAXXXXXXSGDVDARQVHQKGARSVEDSVSLPKDHLSGGGQSRRVVSVASMSQHRSVVGEKPGSENRGNLGMVKILGEAFMRRFNAYAEQVRAAFNRVGEIKVVPSVRTTLFGPGAVGRKK--KRPKHFEVGEILLEEVCICVDAGVWNDLLGDHVGAAFSPEFRLGVKVGPQELLKANGEGRTAKEIGMLLNEKLIRLLTRLVMRETLKTSTLTSMVLTSLALDTDARVRQLQIK-NKSLSPPPLSVEETRSDRRVKHMQHNSAHHNEGVFSCALQENCQTKTADKRSGKLWRGPGRFGSLSALPMGSELPRTGSGRRRRVLSPPLGGSTSNIAPSGERVNGASAGGTGGQGGGAGVPTANGTANHHQGRWRAPGLRLGTTRSLEDPTTAHGGGGEGGDDSTGARSAHQESDLAPDRGDVVGADGXXXXXXXENAKTRRAWGRASEPTVVAQTLSPTRRSQATWLDSGEEGERVTPKTGRGRSLEGVPIDVHCDAKGGASSDIEGAEDRDYETVAKPPPWMEGVAASAKYEEMKPALDVIKRTVLLAVLQQSNRT----------PSAEGSVDCGGATPSGRDGGHWGRAGCASSSE------ERRELNKE----LERKMQEELSAMKRQGKDVDRLVMKALMARVRDSGPNTAFKALASIEISSLLESLAAETRFATYFENGGVDIGHIARSISGRTAGEMVDGVRVTAGKVGAQAQRLRTEALRWRKELLDDNGILPILSDATAGGNA-SLASLVESLSDTILPVNYGLHMVPGGNGNGAGPEGLGQAAVLPIHKDSWERGEAISTDPAERHQRVETGV---GV--GAFGDREEVDEVDVIMQVLDLLEAVEGLKNGIWEGDIVTLGKVEQAVGKVAEGIDVYLILAAGESMLGFLLERLGMLPVGHAKFVGRGVETRVWNLSLEGVQVARHKVDLVMKGFRLPKRGSPVLTPFGPGTIKRYKKRSRCFVVNLDWKMGNGKPVKAYLQPNDITVLEGHDGELSDEDGEKSDARPVKRGIYADRRDIDPLPGSAGENLEPLDGGSGXXXXXXXXXXXXXXXIRAYSSVAPSRGAXXXXGWGRNFYLSKVWNRLRSANVTID-----------GSGHGSESERV----SHKGGTGGVRXXXXXXXXXXXXXXXXXAPRTTA--PSSAYRGAETPELVGVEDVDGDDQCGADGERTQGPPRLRQMPPPPLPPPSLPRNW--------------TAEEIEEILNS-INGTVEGGDGGGGVIRRGESL------LAPSGVDILTAPFLVARISGVGAELKDVRWSVKQTHFPHLKTAGSLEATVSGLTIELELDTQDLAVHDHNEHQGHGNGMGGVSS--------GRSTLGDTPKGLRLSRLRVSVHTVKVHVSNSALSSVYNLAASAFEAAVKRYIVESVEAAVRKSMNALLAMVNHQVSEKWDLLRSVGGGPG 1833
            +LRPVLDFLL+AA LLP  L + +         S K  E    RVTRGV+IAWLTHAAGL+DE LRVFLGIRLTMGLG+P SVDK Y+KMSR+AE+VAEGI VDDFPAL  LYAG        +S     R+ SG IGG DG++     A  ARA+   SLVM+V+ +A TARLWSLVPWS VR+YD+VH+KGITLRLRQVNGILNFSFLAL++                                 GS      GGG   G   S               VG  G  +G S+EDLDGI    E TTD +   E   E D   EE  D     P +  D   +  GG + G        G   + +S  S++     S RS+ +    A G + ++     AAAAXXXXXX                                              R        SEN GNLG+ K+LGEAFMRRFNAY++QV AAF+RV +IKVVP +          G+K+  KR K FEVGEI LE+VCICVD+GVWNDLLGD VGAAFSPEFRL V+VGP+ELL  NG+GR   +IG LLN+KL+RLL RLVMRETLKTSTLTS+V+TSLALDTDAR R+LQ K NKSLSPPP+     R  RR           + G     L  +                       SA+   +    T S      LS           P   RV                             R R  GL                           ARS              +GA    XXXXX                                                                    S          ETVAK PPWMEGV AS +YEEMKP LDVIK+TVLLA+LQQ+NR+          P  +G ++         +G  WGR   + SS       E  EL  E    LER+MQ E+ A +  G DVDRLVMK L+A VRDSGP+TA+KALASIE+SS ++ ++  TRFA + ++ G+D+  ++RS+SG TAGEM++GV+ TAGKVG +A+RLRTEA+R +KELLD++GILP+L+DA    +A SLA+ V  L+D +   +                       ++P  ++SWERG A+  DP E    VE+G+   G+  G  GD +                  E LK  I EG  V+LGKVEQAVGKVA+GIDVYLILAA ESMLGFLLERLG LPVGHAKF G+GVE RVWNL LEGV V R  VDLVMKGFRLPKRG+ V+T FGPG IKRYKKRSRCFVVNLDW++G+GK VKAYLQPNDI +LEGH+G LSDE+ E  ++   K  +     D   L   A E  EP    S XXXXXXXXXXXXXXX       APS         GR   L ++WNR +SA                G G G   ERV       GG+GG                    P TT   P     G  +  +V  E + G+D C +   R  G               S+  +W               A     IL+   +G  E G G G V RR E +        P+  D+++APFLVARISGVGAELKD+ W+VKQTHFP+L+T GSL+AT+SGLTIELELDTQ+L      + QG G+G GG            R   G +P GL+L+RLRVSV  VKVHV N+ALS+VYNLAASAFEAAVKR++VE+VEAAVRK++ +LL ++N Q+SEKW++L  VGGG G
Sbjct:   47 ILRPVLDFLLLAAVLLPWTLWWDMAGEQCWNPSSYKATEPTLLRVTRGVWIAWLTHAAGLLDEALRVFLGIRLTMGLGSPTSVDKTYTKMSRQAEIVAEGIAVDDFPALVRLYAGAEPPRANKRSSSGTARSGSGRIGGDDGTSYAAGLAAAARARVNKSLVMRVERIAATARLWSLVPWSDVRRYDRVHVKGITLRLRQVNGILNFSFLALKKKGRSGVVGLVGDAAAVXXXXXXXXXXXGADMAGGSRRAMSFGGGPAAGPEGSAG-------------VGAPGYGNGRSLEDLDGIDTDGEDTTDTDELLEYEEEDDHKGEEEGDGACYGPVNDADLLASAGGGDAAGNCDAIALLGRRRARSSSSSMMSADEASLRSQSVTTSGAPGCEARRGTTPWAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXKRKKAAPLSSSENHGNLGVFKVLGEAFMRRFNAYSDQVSAAFDRVSDIKVVPKL-------WRWGKKRGPKRRKRFEVGEIFLEDVCICVDSGVWNDLLGDQVGAAFSPEFRLSVRVGPKELLTPNGKGRLPGDIGKLLNDKLVRLLARLVMRETLKTSTLTSVVITSLALDTDARGRRLQGKHNKSLSPPPIE----RGHRR-----------HAGASETTLPVHA----------------------SAVATAAPTSATASAGSENSLS--------QSPPPRSRV-----------------------------RQRPGGLA--------------------------ARSG-------------IGAVSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDS---------VETVAKVPPWMEGVEASPEYEEMKPTLDVIKQTVLLAMLQQTNRSVDLSTEGFEEPQHQGDINAK------HNGRTWGRRHASRSSSTSKNAGEMLELEGEDKRTLERRMQREIIAAEEAGGDVDRLVMKRLLAGVRDSGPDTAYKALASIELSSFIDKVSKGTRFAQHLDHLGIDVKRLSRSLSGLTAGEMMEGVKDTAGKVGDEARRLRTEAVRVQKELLDESGILPLLNDAGGRDDATSLAAAVGLLTDALSGEHNTASXXXXXXXXXXXXXXXXXXXLVPQDEESWERGVAVPNDPEEEGHSVESGLRSAGIVGGGGGDLDXXXXXXXXXXXXXXXXXXERLKKSIVEGG-VSLGKVEQAVGKVAQGIDVYLILAASESMLGFLLERLGKLPVGHAKFAGKGVEARVWNLDLEGVHVKRENVDLVMKGFRLPKRGTAVMTKFGPGNIKRYKKRSRCFVVNLDWRLGSGKRVKAYLQPNDIEILEGHEGRLSDEE-EVKESGHTKVTVDTSEADASTL---APE--EPGGSKSXXXXXXXXXXXXXXXXXXXXXXXAPSLPPPRAERGGRWPSLPRIWNRRKSAGAPQAAASAELGPVGVGVGDGXXXERVVAAAGKPGGSGGKTMARRTASAPVLLL-----PSTTGALPQQQGEGDPSARVVSTEPL-GEDLCSSAFAREAGQAETTSS--------SVSSSWREAAGTTTCHPARENAPPRSRILDDGDDGVAEDGRGFGEVHRRTERINSQGPITGPNSADVMSAPFLVARISGVGAELKDIMWAVKQTHFPYLRTQGSLQATLSGLTIELELDTQELPAGQRKKPQGGGSGSGGAVGESDXXXXIDRGGSGGSPTGLKLTRLRVSVLAVKVHVKNNALSAVYNLAASAFEAAVKRHVVENVEAAVRKNVTSLLTIINTQLSEKWNVLCKVGGGNG 1729          
BLAST of mRNA_H-paniculata_contig469.11679.1 vs. uniprot
Match: A0A836CGM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGM5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 8.470e-17
Identity = 114/475 (24.00%), Postives = 182/475 (38.32%), Query Frame = 0
Query:  161 AGLMDEMLRVFLGIRLTMGLGTPASVDKVYSKMSRRAEVVAEGITVDDFPALASLYAGGAQSVRDPQRASSGEIGGGDGSAAEEARAQSLVMKVDCVAVTARLWSLVPWSRVRQYDKVHLKGITLRLRQVNGILNFSFLALRESPGYTSGSDEGTGAGGGVKVGNNSSINGRSSTNRNNSSSVVGGEGSRSGSMEDLDGIVFAEATTDDEGEEELSREQDLMAEEAMDPPSSPRDSVDTNNTFTGGASEGGASSSSTSRLSLLGRGRFSGRSRRIAAPWATGVKGQQSDVETAAA-AXXXXXXSGDVDARQVHQKGARSVEDSVSLPKDHLSGGGQSRRVVSVASMSQHRSVVGEKPGSENRGNLGMVKILGEAFMRRFNAYAEQVRAAFNRVGEIKVVPSVRTTLFGPGAVGRKKKRPKHFEVGEILLEEVCICVDAGVWNDLLGDHVGAAFSPEFRLGVKVGPQELLKANGEG 634
            AGL+DE+ R++  + L+   GT  +V  + + +    +V    + + DFP L                       G + +AA +  A SL+  +  V +   L+SL+PW    +++   ++G T+ L Q  G LNF+FLAL   P                                               +++D+        + DD      SR+   + E +   P +   +V                  + S+ S L   RF+G  R ++   A    G  S    A A A      + D  A                          Q  R           SV  ++      G+ G ++ LGEAF + F  Y +QV  AF RVG IK++         P  VG  K+R K+  +G I +++ C+ V   VW  LLG+HVGAAF+P+ R  V++   EL++A+G G
Sbjct:   16 AGLIDELFRLYFSLHLSPYFGTKVTVGAIRTSIWLTTDVEMTDVAIADFPELGDW--------------------GRNRAAATDDLASSLI-HIRSVKMRFSLFSLLPWRGPVRFESCSMQGATMHLHQSGGTLNFAFLALGLVPS----------------------------------------------TLDDMS------CSRDDPPSRHSSRDSIELDEPS---PQALLPAVAXXXXXXXXXXXXXLLLRTDSKRSHL-NSRFAGALRALSFARAAANSGSMSAAVAATANAVTNVQAAADAMAXXXXXXXXXXXXXXXXXXXXXXXXXAQGAR-----------SVTPQRRNGSGSGSFGALRELGEAFSKTFQGYLDQVGEAFRRVGRIKLIGR-------PRGVGPPKRRRKYI-IGSIRIDDACVAVGPSVWRQLLGEHVGAAFAPDLRAVVRLRTHELVRADGTG 394          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig469.11679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM78_ECTSI0.000e+043.13Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A836CGM5_9STRA8.470e-1724.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1034..1065

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig469contigH-paniculata_contig469:18575..30670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig469.11679.1mRNA_H-paniculata_contig469.11679.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig469 18575..30670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig469.11679.1 ID=prot_H-paniculata_contig469.11679.1|Name=mRNA_H-paniculata_contig469.11679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1833bp
VRFSASLRSPRGGRGVSPRTGLPVRRSVQMRGRLFERRVRGDSNGSSNGH
SNGHFTRSRNGHLENHKGRQPVRSQRLMYAEQQQQYQQHMNASLTETITL
GSATPMVLLRPVLDFLLMAAALLPLHFVLGQRIVVGEDSPKEQVWARVTR
GVYIAWLTHAAGLMDEMLRVFLGIRLTMGLGTPASVDKVYSKMSRRAEVV
AEGITVDDFPALASLYAGGAQSVRDPQRASSGEIGGGDGSAAEEARAQSL
VMKVDCVAVTARLWSLVPWSRVRQYDKVHLKGITLRLRQVNGILNFSFLA
LRESPGYTSGSDEGTGAGGGVKVGNNSSINGRSSTNRNNSSSVVGGEGSR
SGSMEDLDGIVFAEATTDDEGEEELSREQDLMAEEAMDPPSSPRDSVDTN
NTFTGGASEGGASSSSTSRLSLLGRGRFSGRSRRIAAPWATGVKGQQSDV
ETAAAAGRGGGGSGDVDARQVHQKGARSVEDSVSLPKDHLSGGGQSRRVV
SVASMSQHRSVVGEKPGSENRGNLGMVKILGEAFMRRFNAYAEQVRAAFN
RVGEIKVVPSVRTTLFGPGAVGRKKKRPKHFEVGEILLEEVCICVDAGVW
NDLLGDHVGAAFSPEFRLGVKVGPQELLKANGEGRTAKEIGMLLNEKLIR
LLTRLVMRETLKTSTLTSMVLTSLALDTDARVRQLQIKNKSLSPPPLSVE
ETRSDRRVKHMQHNSAHHNEGVFSCALQENCQTKTADKRSGKLWRGPGRF
GSLSALPMGSELPRTGSGRRRRVLSPPLGGSTSNIAPSGERVNGASAGGT
GGQGGGAGVPTANGTANHHQGRWRAPGLRLGTTRSLEDPTTAHGGGGEGG
DDSTGARSAHQESDLAPDRGDVVGADGGGGGGGGENAKTRRAWGRASEPT
VVAQTLSPTRRSQATWLDSGEEGERVTPKTGRGRSLEGVPIDVHCDAKGG
ASSDIEGAEDRDYETVAKPPPWMEGVAASAKYEEMKPALDVIKRTVLLAV
LQQSNRTPSAEGSVDCGGATPSGRDGGHWGRAGCASSSEERRELNKELER
KMQEELSAMKRQGKDVDRLVMKALMARVRDSGPNTAFKALASIEISSLLE
SLAAETRFATYFENGGVDIGHIARSISGRTAGEMVDGVRVTAGKVGAQAQ
RLRTEALRWRKELLDDNGILPILSDATAGGNASLASLVESLSDTILPVNY
GLHMVPGGNGNGAGPEGLGQAAVLPIHKDSWERGEAISTDPAERHQRVET
GVGVGAFGDREEVDEVDVIMQVLDLLEAVEGLKNGIWEGDIVTLGKVEQA
VGKVAEGIDVYLILAAGESMLGFLLERLGMLPVGHAKFVGRGVETRVWNL
SLEGVQVARHKVDLVMKGFRLPKRGSPVLTPFGPGTIKRYKKRSRCFVVN
LDWKMGNGKPVKAYLQPNDITVLEGHDGELSDEDGEKSDARPVKRGIYAD
RRDIDPLPGSAGENLEPLDGGSGSTSSGSTSTSTSTSGIRAYSSVAPSRG
AGKGKGWGRNFYLSKVWNRLRSANVTIDGSGHGSESERVSHKGGTGGVRR
RRRASASETTTALPPPAPRTTAPSSAYRGAETPELVGVEDVDGDDQCGAD
GERTQGPPRLRQMPPPPLPPPSLPRNWTAEEIEEILNSINGTVEGGDGGG
GVIRRGESLLAPSGVDILTAPFLVARISGVGAELKDVRWSVKQTHFPHLK
TAGSLEATVSGLTIELELDTQDLAVHDHNEHQGHGNGMGGVSSGRSTLGD
TPKGLRLSRLRVSVHTVKVHVSNSALSSVYNLAASAFEAAVKRYIVESVE
AAVRKSMNALLAMVNHQVSEKWDLLRSVGGGPG
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