prot_H-paniculata_contig46815.11658.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig46815.11658.1
Unique Nameprot_H-paniculata_contig46815.11658.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig46815.11658.1 vs. uniprot
Match: A0A8F0JXH9_9PHAE (Ribosomal protein L33 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JXH9_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 7.030e-33
Identity = 55/69 (79.71%), Postives = 64/69 (92.75%), Query Frame = 0
Query:    1 MAKNKGARILITLKCVECKDIGNNIQINSRSRKKVSYTTTKNRRNTPNRLELKKFCPNCNLHTLQKEIK 69
            MAKNKGARILITLKC EC++ GN  Q ++++RKKVSYTTTKNRRNTPNRLE+KKFCP+CNLHT+QKEIK
Sbjct:    1 MAKNKGARILITLKCTECRNFGNMTQASTKNRKKVSYTTTKNRRNTPNRLEIKKFCPSCNLHTIQKEIK 69          
BLAST of mRNA_H-paniculata_contig46815.11658.1 vs. uniprot
Match: A0A7T8JK09_SCYLO (50S ribosomal protein L33, chloroplastic n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8JK09_SCYLO)

HSP 1 Score: 102 bits (254), Expect = 3.980e-27
Identity = 51/78 (65.38%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    1 MAKNKGARILITLKCVECKDIGNNIQ---------INSRSRKKVSYTTTKNRRNTPNRLELKKFCPNCNLHTLQKEIK 69
            MAKNKGARI+ITL+C++CK   NNI+         I  +S +K+ YTTTKNRRNTP+RLELKK+CPNCNLHT QKEIK
Sbjct:    1 MAKNKGARIIITLRCMDCKKTSNNIEKVQASDGQKIRRKSSRKIDYTTTKNRRNTPDRLELKKYCPNCNLHTQQKEIK 78          
BLAST of mRNA_H-paniculata_contig46815.11658.1 vs. uniprot
Match: A0A8F0FAU0_9PHAE (Ribosomal protein L33 n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0FAU0_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 6.780e-26
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 0
Query:    1 MAKNKGARILITLKCVECKDIGNN---IQINS-------RSRKKVSYTTTKNRRNTPNRLELKKFCPNCNLHTLQKEIK 69
            MAKNKGARI+ITL+C  CK + N+     INS       +S+KK  YTTTKNRRNTPNRLELKKFCPNCN HT QKEIK
Sbjct:    1 MAKNKGARIIITLRCTNCKKVSNDNGKTSINSNQVGMAKKSQKKTDYTTTKNRRNTPNRLELKKFCPNCNAHTEQKEIK 79          
BLAST of mRNA_H-paniculata_contig46815.11658.1 vs. uniprot
Match: A0A8F4XLG6_9PHAE (Ribosomal protein L33 n=3 Tax=Sargassum TaxID=3015 RepID=A0A8F4XLG6_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 9.640e-26
Identity = 53/79 (67.09%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    1 MAKNKGARILITLKCVECKDIGNNIQ----INSR------SRKKVSYTTTKNRRNTPNRLELKKFCPNCNLHTLQKEIK 69
            MAKNKG RI+ITL+C  CK IG N +    I+S+      SRKK SYTTTKNRRNTP+RLELKKFCPNCN HT+ KEIK
Sbjct:    1 MAKNKGTRIIITLRCTTCKSIGKNNEEKKIIDSKISNVRLSRKKFSYTTTKNRRNTPDRLELKKFCPNCNTHTIHKEIK 79          
BLAST of mRNA_H-paniculata_contig46815.11658.1 vs. uniprot
Match: D1J7B7_ECTSI (50S ribosomal protein L33, chloroplastic n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7B7_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 2.050e-25
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    1 MAKNKGARILITLKCVECKDIGNNIQINSRSRKKVSYTTTKNRRNTPNRLELKKFCPNCNLHTLQKEIK 69
            MAKNKGARI+ITL+CV+CK    N   + +S +K+ YTTTKNRRNTP+RL LKK+CPNCN+HTLQKEIK
Sbjct:    1 MAKNKGARIIITLRCVDCKKTTTN-NGDKKSSRKIDYTTTKNRRNTPDRLVLKKYCPNCNIHTLQKEIK 68          
BLAST of mRNA_H-paniculata_contig46815.11658.1 vs. uniprot
Match: A0A8F0F6U4_AKKLU (Ribosomal protein L33 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F6U4_AKKLU)

HSP 1 Score: 97.4 bits (241), Expect = 3.610e-25
Identity = 51/76 (67.11%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    1 MAKNKGARILITLKCVECKDIGNNI---QINS----RSRKKVSYTTTKNRRNTPNRLELKKFCPNCNLHTLQKEIK 69
            MAKNKGARI+ITL+C +CK   NN+   + NS    +S++K+ YTTTKNRRNTP+RLELKKFCPNCN HT QKEIK
Sbjct:    1 MAKNKGARIIITLRCTQCKKGTNNVGNSENNSNQTKKSQRKIDYTTTKNRRNTPDRLELKKFCPNCNSHTQQKEIK 76          
BLAST of mRNA_H-paniculata_contig46815.11658.1 vs. uniprot
Match: A0A8F0JZM8_9PHAE (Ribosomal protein L33 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZM8_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 3.610e-25
Identity = 49/76 (64.47%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    1 MAKNKGARILITLKCVECKDIGNNIQINS-------RSRKKVSYTTTKNRRNTPNRLELKKFCPNCNLHTLQKEIK 69
            MAKNKG RI+ITL+C  CK      ++NS       + +KK+ YTTTKNRRNTP+RLELKKFCPNCN HTLQKEIK
Sbjct:    1 MAKNKGVRIVITLRCTNCKKSAEKRELNSNQGLTDTKRKKKIDYTTTKNRRNTPDRLELKKFCPNCNSHTLQKEIK 76          
BLAST of mRNA_H-paniculata_contig46815.11658.1 vs. uniprot
Match: A0A6B7EV79_9PHAE (50S ribosomal protein L33 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV79_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 5.870e-25
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    1 MAKNKGARILITLKCVECKDIGNNIQINSRSRKKVSYTTTKNRRNTPNRLELKKFCPNCNLHTLQKEIK 69
            M KNKGARI+ITL+C +CK   +N +   R  KK+ YTTTKNRRNTP+RLE+KK+CPNCNLHTL KEIK
Sbjct:    1 MPKNKGARIIITLRCQDCKK-NSNTEDQKRKSKKIDYTTTKNRRNTPDRLEVKKYCPNCNLHTLHKEIK 68          
BLAST of mRNA_H-paniculata_contig46815.11658.1 vs. uniprot
Match: A0A5B9RCQ8_9PHAE (50S ribosomal protein L33, chloroplastic n=4 Tax=Laminariales TaxID=2886 RepID=A0A5B9RCQ8_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 7.920e-25
Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 0
Query:    1 MAKNKGARILITLKCVECKDIGNN---IQINS-------RSRKKVSYTTTKNRRNTPNRLELKKFCPNCNLHTLQKEIK 69
            MAKNKGARI+ITL+C  CK   N      INS       +S+KK+ YTTTKNRRNTP+RLELKKFCPNCN HT QKEIK
Sbjct:    1 MAKNKGARIIITLRCTNCKKTSNTNGKTDINSSQGELAKKSQKKIDYTTTKNRRNTPDRLELKKFCPNCNSHTQQKEIK 79          
BLAST of mRNA_H-paniculata_contig46815.11658.1 vs. uniprot
Match: A0A8F0F8H0_MACPY (Ribosomal protein L33 n=2 Tax=Macrocystis TaxID=35121 RepID=A0A8F0F8H0_MACPY)

HSP 1 Score: 96.7 bits (239), Expect = 7.920e-25
Identity = 52/79 (65.82%), Postives = 58/79 (73.42%), Query Frame = 0
Query:    1 MAKNKGARILITLKCVECKDIGN-----NIQINS-----RSRKKVSYTTTKNRRNTPNRLELKKFCPNCNLHTLQKEIK 69
            MAKNKGARI+ITL+C  CK I N     NI  N      +SRKK+ YTTTKNRRNTP+RLELKKFCP CN HT QKE+K
Sbjct:    1 MAKNKGARIIITLRCTNCKKIVNTNGKANINSNQGATAKKSRKKIDYTTTKNRRNTPDRLELKKFCPYCNTHTYQKEVK 79          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46815.11658.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JXH9_9PHAE7.030e-3379.71Ribosomal protein L33 n=1 Tax=Protohalopteris sp. ... [more]
A0A7T8JK09_SCYLO3.980e-2765.3850S ribosomal protein L33, chloroplastic n=3 Tax=S... [more]
A0A8F0FAU0_9PHAE6.780e-2667.09Ribosomal protein L33 n=2 Tax=Ecklonia TaxID=10540... [more]
A0A8F4XLG6_9PHAE9.640e-2667.09Ribosomal protein L33 n=3 Tax=Sargassum TaxID=3015... [more]
D1J7B7_ECTSI2.050e-2569.5750S ribosomal protein L33, chloroplastic n=2 Tax=E... [more]
A0A8F0F6U4_AKKLU3.610e-2567.11Ribosomal protein L33 n=2 Tax=Laminariales TaxID=2... [more]
A0A8F0JZM8_9PHAE3.610e-2564.47Ribosomal protein L33 n=1 Tax=Desmarestia aculeata... [more]
A0A6B7EV79_9PHAE5.870e-2568.1250S ribosomal protein L33 n=1 Tax=Cladosiphon okam... [more]
A0A5B9RCQ8_9PHAE7.920e-2565.8250S ribosomal protein L33, chloroplastic n=4 Tax=L... [more]
A0A8F0F8H0_MACPY7.920e-2565.82Ribosomal protein L33 n=2 Tax=Macrocystis TaxID=35... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001705Ribosomal protein L33TIGRFAMTIGR01023TIGR01023coord: 1..69
e-value: 2.1E-19
score: 67.6
IPR001705Ribosomal protein L33PFAMPF00471Ribosomal_L33coord: 10..69
e-value: 1.0E-20
score: 73.9
IPR001705Ribosomal protein L33HAMAPMF_00294Ribosomal_L33coord: 7..69
score: 17.885
IPR038584Ribosomal protein L33 superfamilyGENE3D2.20.28.120coord: 2..69
e-value: 2.5E-22
score: 80.5
NoneNo IPR availablePANTHERPTHR43168FAMILY NOT NAMEDcoord: 1..69
NoneNo IPR availablePANTHERPTHR43168:SF3coord: 1..69
IPR018264Ribosomal protein L33, conserved sitePROSITEPS00582RIBOSOMAL_L33coord: 37..56
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 3..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46815contigH-paniculata_contig46815:488..697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46815.11658.1mRNA_H-paniculata_contig46815.11658.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig46815 488..697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig46815.11658.1 ID=prot_H-paniculata_contig46815.11658.1|Name=mRNA_H-paniculata_contig46815.11658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
MAKNKGARILITLKCVECKDIGNNIQINSRSRKKVSYTTTKNRRNTPNRL
ELKKFCPNCNLHTLQKEIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001705Ribosomal_L33
IPR038584L33_sf
IPR018264Ribosomal_L33_CS
IPR011332Ribosomal_zn-bd