prot_H-paniculata_contig4680.11656.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4680.11656.1
Unique Nameprot_H-paniculata_contig4680.11656.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length148
Homology
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BLAST of mRNA_H-paniculata_contig4680.11656.1 vs. uniprot
Match: A0A6H5KLX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX8_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.350e-15
Identity = 47/113 (41.59%), Postives = 64/113 (56.64%), Query Frame = 0 
Query:   18 WLITTSVYLVLCMRHAVCQRIIL---DTFDNISTEDLEVGGACVNGCTREVVKSVAAVWGETNCELRVQNLLDHIEQDVEGGTLNIVHSCFDQNQNLQYQ-VGGCLACVSMCL 126
            W I  +  L++      C  ++     T D I   D+E GG C  GC R VV +     GE +CELRV+NLLDH ++DV GG+LN+VHSC +   +L YQ  G CL   S+C+
Sbjct:   32 WSIARAALLLVAFGAPACLGVLRRLGSTSDAIVAADIEPGGPCDAGCVRTVVNAEVYAAGEVDCELRVENLLDHTDEDVLGGSLNVVHSCTNAAGDLLYQDQGECL--YSVCV 142
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4680.11656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KLX8_9PHAE1.350e-1541.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4680contigH-paniculata_contig4680:11455..11898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4680.11656.1mRNA_H-paniculata_contig4680.11656.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4680 11427..11898 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4680.11656.1 ID=prot_H-paniculata_contig4680.11656.1|Name=mRNA_H-paniculata_contig4680.11656.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp
MVEGNESCCSRRVRELRWLITTSVYLVLCMRHAVCQRIILDTFDNISTED
LEVGGACVNGCTREVVKSVAAVWGETNCELRVQNLLDHIEQDVEGGTLNI
VHSCFDQNQNLQYQVGGCLACVSMCLQCGYQSAGSMNVVRRVGRGAVT
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