prot_H-paniculata_contig4583.11477.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4583.11477.1
Unique Nameprot_H-paniculata_contig4583.11477.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length421
Homology
BLAST of mRNA_H-paniculata_contig4583.11477.1 vs. uniprot
Match: D7G8K0_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8K0_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 8.270e-128
Identity = 214/360 (59.44%), Postives = 253/360 (70.28%), Query Frame = 0
Query:    1 MLMDACGCELPNEGRRADVSGRGLYGVVQEDLTYFVRLQVVDAGDNSIPFESFARLPRLEELLIPCNNIRGVRVDGR----------------NSYCKLQRLDLSYNNLSANALSALGQLPALLDLDLTCNGLTELPLAVGHLSLLQKLSLERNQLESDGVINVLSTLPALRELNLAFNYFTGIHFTPETVEYAFPLLETLDLGFNYISHQNDVEGLILLERLQRIILYGNPLAGPTGEDPPGLCVEALINKADRIRHGWVSGPIEVITEIPRKRHKTRGGGGTRGVSGRRPYSDIGITMVDDGRLPSALEFRAAGNAALFSFESTNARALEQRQHPQHQRYHRSSPSNIVELTLRNARE 344
            MLMDACGC+LP+EGRRADVSGRGL  VV+ED+++FVRLQ VDAGDNS+PF+SF  LPRLEEL +PCN+IR +  DGR                N Y +L+RLDLSYN+LS  ALS L  LP+L DLDLTCNGL +LP+A+    +LQKLSLERNQLESD V +VLS LP LRELNLAFNYFTGI+   +  E AFPLLE LDLGFN+I  ++DV  ++L ERLQR+ILYGNPLAGPTGED  GLCVE L+ ++DRIR  + S PIEVITE+PR R +TRG          RPY D G+TMVD+G LP A  FR +GN  LF FE   + +      P           NIVE TLR ARE
Sbjct:    1 MLMDACGCDLPDEGRRADVSGRGLVSVVREDMSFFVRLQAVDAGDNSLPFDSFLDLPRLEELRLPCNSIRDI--DGRKILTQLQLGGGDGNSGNGYGQLRRLDLSYNSLSGGALSVLTHLPSLTDLDLTCNGLVDLPVAMARFPVLQKLSLERNQLESDAVFDVLSRLPGLRELNLAFNYFTGINLDLDIAEQAFPLLEALDLGFNFIGSESDVVVVVLFERLQRLILYGNPLAGPTGEDSLGLCVEKLVAESDRIRGDYASCPIEVITELPRIR-QTRGXXXXXXXXXXRPYCDTGVTMVDEGCLPPASTFRDSGNRTLFRFERKPSGSSGDGDAPD---------DNIVEATLRLARE 348          
BLAST of mRNA_H-paniculata_contig4583.11477.1 vs. uniprot
Match: A0A836C9W6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9W6_9STRA)

HSP 1 Score: 251 bits (640), Expect = 5.100e-73
Identity = 149/323 (46.13%), Postives = 194/323 (60.06%), Query Frame = 0
Query:    2 LMDACGCELPNEGRRADVSGRGLYGVVQEDLTYFVRLQVVDAGDNSIPFESFARLPRLEELLIPCNNIRGVRVDGRN--SYCKLQRLDLSYNNLSANALSALGQLPALLDLDLTCNGLTELPLAVGHLSLLQKLSLERNQLESDGVINVLSTLPALRELNLAFNYFTGIHFTPETVEYAFPLLETLDLGFNYISHQNDVEGLILLERLQRIILYGNPLAGPTGEDPPGLCVEALINKADRIRHGWVSGPIEVITEIPRKRHKTRGGGGTRGVSGRRPYSDIG---ITMVDDGRLPSALEFRAAGNAALFSFE---STNARALE 316
            +++  G +LP+  RR+D+SG     VVQ+DL YF +LQ +DAGDNS+    FA L +L EL + CN I           SY  L RLDLSYN LS  A++ L QLP L  LDL+CNGLT LP  +  L  L+ L LERNQLE   V+  L+TLP LREL+LAFNYF  I              E LDL FNYI  Q D   L+LL +L R+ILYGNPL GP+GED  G+ +E L + ADR R GW    +E ITE+PR +H+  G   +R    RR Y ++    IT+V +  +P++ + +A GN A+F FE   S NA A++
Sbjct:  162 ILEGSGVDLPDGARRSDISGGNFTEVVQDDLGYFNKLQELDAGDNSLSLSCFACLQQLHELRLQCNGITAPPAPPLPPASYPALTRLDLSYNALSGAAIAQLAQLPVLKYLDLSCNGLTSLPAELAALPCLECLVLERNQLEGGEVMATLATLPVLRELSLAFNYFAAI--------------EALDLAFNYIGAQADAMPLVLLPKLARVILYGNPLCGPSGEDLSGITIEGLEDAADRARDGWSVPLLEFITEMPRPKHERAGLKNSR----RRMYCEMTRAPITLVSEAPVPASRDLKATGNKAVFKFEEARSDNAAAMD 466          
BLAST of mRNA_H-paniculata_contig4583.11477.1 vs. uniprot
Match: A0A7S3XTX8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTX8_HETAK)

HSP 1 Score: 236 bits (601), Expect = 9.350e-68
Identity = 138/302 (45.70%), Postives = 177/302 (58.61%), Query Frame = 0
Query:    2 LMDACGCELPNEGRRADVSGRGLYGVVQEDLTYFVRLQVVDAGDNSIPFESFARLPRLEELLIPCNNIRGVRVDGRNSYCKLQRLDLSYNNLSANALSALGQLPALLDLDLTCNGLTELPLAVGHLSLLQKLSLERNQLESDGVINVLSTLPALRELNLAFNYFTGIHFTPE--TVEYAFPLLETLDLGFNYISHQNDVEGLILLERLQRIILYGNPLAGPTGEDPPGLCVEALINKADRIRHGWVSGPIEVITEIPRKRHKTRGGGGTRGVSGRRPYSDIGITMVDDGRLPSALEFRAAGN 301
            L+ A G + P+E RRAD SG+G   V   DL YFVRL  +D  +N +  E F RLPRL++L +  N +  +    +  Y  L RLDLSYN +   AL  L  LP L  LDLT NGL ELP A+     L+ L+LE NQ + + +  VL+ +P LREL LAFN+   I   P     E  FP L+ LDL FNY++ + DV  L  L  L R+ILYGNPLAGPTGEDP G CV   ++ A+R R GW + P+EV+ E PR+R   R          RRPY D+   +VD+  LP+  EFR AGN
Sbjct:  105 LLQAAGVQFPDEARRADASGKGYEEVNTADLGYFVRLATLDVSENHLALEWFCRLPRLKDLRLAYNGLTAL--GPQEGYPALMRLDLSYNAVEPAALGCLAALPRLRALDLTSNGLAELPDALAGFHTLEILTLEHNQFDGE-IPLVLAEIPKLRELYLAFNF---IDTAPAECAAEGQFPALDLLDLAFNYVAAERDVLPLAALPVLTRVILYGNPLAGPTGEDPAGACVRRFLHLAERARQGWSARPLEVVLEQPRRRAAER--------VNRRPYRDVETVVVDEAPLPTGGEFREAGN 392          
BLAST of mRNA_H-paniculata_contig4583.11477.1 vs. uniprot
Match: A0A7S4E570_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E570_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.000e-52
Identity = 121/323 (37.46%), Postives = 165/323 (51.08%), Query Frame = 0
Query:    1 MLMDACGCELPNEGRRADVSGRGLYGVVQEDLTYFVRLQVVDAGDNS-IPFESFARLPRLEELLIPCNNIRGVRVDGRNSYCKLQRLDLSYNNLSANALSALGQLPALLDLDLTCNGLTELPLAVGHLSLLQKLSLERNQLESDGV------------------INVLSTLPALRELNLAFNYFTGIHFTPETVEYAFPLLETLDLGFNYISHQNDVEGLILLERLQRIILYGNPLAGPTGEDPPGLCVEALINKADRIRHGWVSGPIEVITEIPRKRHKTRGGGGTRGVSGRRPYSDIGITMVDDGRLPSALEFRAAGNAAL 304
            +L+DACG E P+EG RADVSGR    V   DL YF  L  VDA DN  +P E F  LPRL++L    N+         + + +L  LDLSYN  + + +S L  +P L DLDLT NGL ELP        L+KL LERN+L+ D                    +    T+ A+ E        T +  T    E     L  LDL  N+I  + D++ L +L +L+++ LYGNPL G TGEDP G  V  L+  A + R GW +  ++V TE+PRKR      G   G    R +  IG+  + +  +P+A +FR  G+ AL
Sbjct:  127 LLLDACGVEFPDEGHRADVSGRHATEVSSTDLEYFPNLSWVDASDNPRLPLEDFGSLPRLKDLRFAANSWSVCSSVSEDWFPRLLVLDLSYNTATLDGISQLVTMPRLRDLDLTGNGLVELPDVFSDFQSLEKLFLERNRLQGDXXXXXXXXXXXXXXXXXXXXVTSTPTIDAMAEA-------TSLDHTEILAE-----LVALDLAHNHIRSEKDIDDLTVLPKLEQLSLYGNPLLGATGEDPTGETVRTLVQTATQQRDGWTARHLDVTTEVPRKRPNRGTAGAAAGAKCDRRFERIGVQRIAEAPIPTAAQFREKGHQAL 437          
BLAST of mRNA_H-paniculata_contig4583.11477.1 vs. uniprot
Match: A0A482S2K3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2K3_9ARCH)

HSP 1 Score: 107 bits (266), Expect = 6.080e-23
Identity = 58/167 (34.73%), Postives = 99/167 (59.28%), Query Frame = 0
Query:    2 LMDACGCELPNEGRRADVSGRGLYGVVQEDLTYFVRLQVVDAGDNSIPFESFARLPRLEELLIPCNNIRGVRVDGRNSYCKLQRLDLSYNNLSANALSALGQLPALLDLDLTCNGLTELPLAVGHLSLLQKLSLERNQLESDGVINVLSTLPALRELNLAFNYFTGI 168
            L++  G   P + +   +S + L+ VV +DLTYF  L  +D  +N +P   F  LP+L EL + CN+I  V +     + +L  LDLSYN+++ ++++ +  LP L +LDL+ N L  LP  +     L+K+ LE N+++ +GV   LST+P +R ++L+ N+ + I
Sbjct:   79 LLEKAGIHFPEDLQAITLSDKNLFTVVDDDLTYFTELLYLDVSENRLPLYPFGALPKLRELRLTCNHI--VDLGELYGFSQLLYLDLSYNSINVDSVNEIMALPVLKELDLSGNTLKTLPPDLSGFGALEKIILEYNKMDDNGVFMSLSTIPQIRYVDLSHNFLSVI 243          
BLAST of mRNA_H-paniculata_contig4583.11477.1 vs. uniprot
Match: A0A7S2Y223_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y223_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.560e-22
Identity = 46/105 (43.81%), Postives = 67/105 (63.81%), Query Frame = 0
Query:  201 LILLERLQRIILYGNPLAGPTGEDPPGLCVEALINKADRIRHGWVSGPIEVITEIPRKRHKTRGGGGTRGVSGRRPYSDIGITMVDDGRLPSALEFRAAGNAALF 305
            L  L ++ RIILYGNP+AGP+GEDP G CV+  +  A++ RHGW+  P+EV+ E PR++   R          RRPY D+   +V++  +PSA +F+ AGN  L+
Sbjct:    2 LAKLPQVTRIILYGNPIAGPSGEDPSGACVQGFLATAEQFRHGWIERPLEVVLEEPRQKVSER--------VNRRPYRDVETVVVNEKPIPSAAQFKEAGNKRLY 98          
BLAST of mRNA_H-paniculata_contig4583.11477.1 vs. uniprot
Match: UPI001C890EE4 (X-ray radiation resistance-associated protein 1 n=1 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C890EE4)

HSP 1 Score: 101 bits (252), Expect = 1.750e-19
Identity = 84/312 (26.92%), Postives = 131/312 (41.99%), Query Frame = 0
Query:    9 ELPNEGRRADVSGRGLYGVVQEDLTYFVRLQVVDAGDNSIPFESFARLPRLEELLIPCNNIRGVRVDGRNSYCKLQRLDLSYNNLSANALSALGQLPALLDLDLTCNGLTELPLAVGHLS-------------LLQKLSLERNQLESDGVINVLSTLPALRELNLAFNYFTGIHFT--------------PETV--------------------------------EYAFPLLETLDLGFNYISHQNDVEGLILLERLQRIILYGNPLAGPTGEDPPGLCVEALINKADRIRHGWVSGPIEVITEIPRKRHK 261
            + P++    ++SG+ L  V  ED   F  +  ++A DN +P E FAR P L EL +  N++  + +   + + KL+ LDLS+NNL+  ++  LG LP L  L LT N L  LPL +   S              L+ L L+ N+L S  V   L+ L  LR LNL  NY +G+ F               P+ +                                   FP L  L+L  N I+ +  +  + L  +L  ++++ NPL      DPP L        A +I     + P      +P+++ K
Sbjct:   88 DKPSDLCSVNISGQRLQTVKPEDFHEFDNMAYINASDNHLPLEPFARFPALRELELSLNSVHDLEIHAED-FQKLEVLDLSFNNLTGESILNLGLLPHLKVLHLTGNQLEMLPLNIAGTSPGENTEQSVSLFQTLEVLMLDDNKLSSPEVFMSLANLKRLRHLNLQSNYISGVPFLEQMATLPDAQTGIMPQNIGQKEDKARTSLEMHAGASQYYQRKDNVCVLGLHLPFPELRHLNLANNEIAEEEALLPVALFSKLSELVIHSNPLTTQRSGDPPMLTCFLQDKLAIKITRKKTTNPTRRHIILPKRKEK 398          
BLAST of mRNA_H-paniculata_contig4583.11477.1 vs. uniprot
Match: A0A7S0N1X0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N1X0_9CHLO)

HSP 1 Score: 99.8 bits (247), Expect = 2.230e-19
Identity = 74/223 (33.18%), Postives = 112/223 (50.22%), Query Frame = 0
Query:    2 LMDACGCELPNEGRRADVSGRGLYGVVQEDLTYFVRLQVVDAGDNSIP-FESFARLPRLEELLIPCNNIRGVRVDGRNSYCKLQRLDLSYNNLSANALSALGQLPALLDLDLTCNGLTELP---LAVGHLSLLQKLSLE-RNQLESDGVINVLSTLPALRELNLAFNYFTGIHFTPETVEY-AFPLLETLDLGFNYISHQNDVEGLILLERLQRIILYGNPLA 218
            L+ ACG ELP   +   + G+    V  EDL +FV LQ +D GDN +P     A LP L  L + CN++  ++++   S+  L+ L+L YN L A+AL  L  LP L +LD++ N +   P           L+ L L  +    +  V+  L  LP LR L +  N      F P+ V    FP L  LDL  N +  ++D+   +    L++++L+G PLA
Sbjct:   85 LVGACGVELPEAVQTVSLMGKNYVDVEVEDLHHFVCLQDLDVGDNQLPGMHCLAELPVLRTLKMQCNSLSTLQIEP-GSFHTLETLELCYNCLGADALLQLATLPNLRELDVSFNCINRPPSEQFPSEAFPALETLHLGGQTPKMAPSVVYRLGHLPRLRALRVPNNNIQS--FNPDKVRPDMFPALGLLDLADNRVEVEDDIVAFVQCPELEKVVLWGTPLA 304          
BLAST of mRNA_H-paniculata_contig4583.11477.1 vs. uniprot
Match: A0A7S2S8V5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8V5_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 4.190e-19
Identity = 44/107 (41.12%), Postives = 69/107 (64.49%), Query Frame = 0
Query:  153 PALRELNLAFNYFTGIHFTPETVEYAFPLLETLDLGFNYISHQNDVEGLILLERLQRIILYGNPLAGPTGEDPPGLCVEALINKADRIRHGWVSGPIEVITEIPRKR 259
            P L+EL+L FNY T        V+  FP L TL+L FNYI+ ++D+  ++ L +L+ +++YGNPL GPTGEDP G  +E L      +R G+ +  ++++TE P+K+
Sbjct:    1 PQLQELHLGFNYLTVFPRAATGVD-RFPCLHTLNLAFNYIASEDDLVPVVHLHKLEMLVIYGNPLLGPTGEDPSGTSIEYLAQCLLDVRTGYSTRALDILTEKPKKK 106          
BLAST of mRNA_H-paniculata_contig4583.11477.1 vs. uniprot
Match: UPI0007B7E65E (LOW QUALITY PROTEIN: X-ray radiation resistance-associated protein 1-like n=3 Tax=Sinocyclocheilus TaxID=75365 RepID=UPI0007B7E65E)

HSP 1 Score: 92.4 bits (228), Expect = 2.000e-16
Identity = 62/185 (33.51%), Postives = 94/185 (50.81%), Query Frame = 0
Query:    1 MLMDACGCELPNEGRRADVSGRGLYGVVQEDLTYFVRLQVVDAGDNSIPFESFARLPRLEELLIPCNNIRGVRVDGRNSYCKLQRLDLSYNNLSANALSALGQLPALLDLDLTCNGLTELPLAVGH---------------LSLLQKLSLERNQLESDGVINVLSTLPALRELNLAFNYFTGIHF 170
            + +  C  + P++    ++SG+ L  V  E L  F ++  ++A DN +  E FAR P L EL +  N++  + +   + + KL+ LDLS+NNL+  ++  LG LP L  L LT N L  LPL +                    L+ L L+ N+L S GV   L+ L  LR LNL  NY +G+ F
Sbjct:   82 LFLSLCCVDKPSDLCSVNISGQRLQTVRLEGLEQFDKVAYINASDNHLTLEPFARFPALRELELSLNSLHNLEIHAED-FQKLEVLDLSFNNLTGESIINLGLLPRLKVLHLTGNRLQMLPLNMAEPCTYSGENTERGVLLFQTLEVLMLDDNKLSSPGVFMSLANLKRLRHLNLQGNYISGVPF 265          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4583.11477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8K0_ECTSI8.270e-12859.44Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A836C9W6_9STRA5.100e-7346.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XTX8_HETAK9.350e-6845.70Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4E570_9STRA2.000e-5237.46Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A482S2K3_9ARCH6.080e-2334.73Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2Y223_9STRA2.560e-2243.81Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
UPI001C890EE41.750e-1926.92X-ray radiation resistance-associated protein 1 n=... [more]
A0A7S0N1X0_9CHLO2.230e-1933.18Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7S2S8V5_9STRA4.190e-1941.12Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
UPI0007B7E65E2.000e-1633.51LOW QUALITY PROTEIN: X-ray radiation resistance-as... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..235
e-value: 2.6E-33
score: 116.9
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 82..140
e-value: 5.7E-7
score: 29.2
IPR038894X-ray radiation resistance-associated protein 1PANTHERPTHR22710X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1coord: 1..226
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 12..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4583contigH-paniculata_contig4583:6402..9221 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4583.11477.1mRNA_H-paniculata_contig4583.11477.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4583 6402..9221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4583.11477.1 ID=prot_H-paniculata_contig4583.11477.1|Name=mRNA_H-paniculata_contig4583.11477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=421bp
MLMDACGCELPNEGRRADVSGRGLYGVVQEDLTYFVRLQVVDAGDNSIPF
ESFARLPRLEELLIPCNNIRGVRVDGRNSYCKLQRLDLSYNNLSANALSA
LGQLPALLDLDLTCNGLTELPLAVGHLSLLQKLSLERNQLESDGVINVLS
TLPALRELNLAFNYFTGIHFTPETVEYAFPLLETLDLGFNYISHQNDVEG
LILLERLQRIILYGNPLAGPTGEDPPGLCVEALINKADRIRHGWVSGPIE
VITEIPRKRHKTRGGGGTRGVSGRRPYSDIGITMVDDGRLPSALEFRAAG
NAALFSFESTNARALEQRQHPQHQRYHRSSPSNIVELTLRNARERCKTRH
MPKKHQGAHSTNTAGLGTVDAVLTSMGVGMDQMILENRAKERRDAALSSR
RPGLSSIIRTVNAVLDENEY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR038894XRRA1