prot_H-paniculata_contig4573.11459.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4573.11459.1
Unique Nameprot_H-paniculata_contig4573.11459.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length214
Homology
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A6H5KDQ7_9PHAE (U-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ7_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.690e-29
Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 0
Query:  152 RHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVAST 211
            +HLCPITRCPM DPAVAADGYTYER AIERWLSE+DTSPVTG+ LETKVVFKNWSLV+S+
Sbjct:   42 QHLCPITRCPMEDPAVAADGYTYERTAIERWLSEHDTSPVTGKALETKVVFKNWSLVSSS 101          
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: D7G3T4_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T4_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 3.180e-20
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:  162 MVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVAST 211
            M DPAVAADGYTYER AIE WLSE+DTSPVTG+ LETKVVFKNWSLV+S+
Sbjct:    1 MEDPAVAADGYTYERTAIECWLSEHDTSPVTGKALETKVVFKNWSLVSSS 50          
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A7S1UFM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFM5_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.320e-14
Identity = 34/56 (60.71%), Postives = 45/56 (80.36%), Query Frame = 0
Query:  155 CPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVAS 210
            CPIT  PM +P VAADG+TYER+A+ERWL ++DTSP+TG+ L TK +F N +L A+
Sbjct:   37 CPITGAPMCEPVVAADGHTYERSAMERWLRDHDTSPLTGEVLPTKALFPNRTLAAT 92          
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A1J3K5K6_NOCCA (U-box domain-containing protein 35 (Fragment) n=3 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3K5K6_NOCCA)

HSP 1 Score: 77.4 bits (189), Expect = 5.140e-14
Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 0
Query:  125 PVAEDVQPQQSLATNSTTSGGSSPSPTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVASTMD 213
            P  E ++     A NS  SGGS   PT  LCP+ +  M +P VA+DGYTY+R AIE WL E+DTSP+T   L  K +  N++L ++ M+
Sbjct:  106 PALESLKKIADKARNSL-SGGSKQPPTHFLCPLLKDVMNEPCVASDGYTYDRRAIEEWLEEHDTSPMTDSPLHNKNLLPNYTLYSAIME 193          
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A7S4R752_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R752_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.530e-13
Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:  113 DDLDGGLGGGQGPVAEDVQPQQSLATNSTTSGGSSPSPTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVASTM 212
            D+LDG      G   E++    + + +S T+  ++   T   CPIT  PM DP VAADG+TYER AI RWL  +D SP+TGQ L  K +  N+ L++ST+
Sbjct:   39 DELDGLQDMNNGNAMEELSSSTTTSLSSLTAVATTT--TLPCCPITGQPMKDPVVAADGHTYERHAIRRWLQTSDMSPLTGQTLSHKELVPNYLLLSSTV 136          
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A7S2EJ12_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EJ12_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.070e-13
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 0
Query:  134 QSLATNSTTSGGS----SPSPTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVASTM 212
            + L++++TTS  S    + + T   CPIT  PM DP VAADG+TYER AI RWL  +D SP+TGQ L  K +  N+ L++ST+
Sbjct:   12 EELSSSTTTSLSSLTAVATTTTLPCCPITGQPMKDPVVAADGHTYERHAIRRWLQTSDMSPLTGQTLSHKELVPNYLLLSSTV 94          
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A7J6LA49_PEROL (U-box domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LA49_PEROL)

HSP 1 Score: 74.3 bits (181), Expect = 3.770e-13
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0
Query:  150 PTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVV 201
            P   +CPITR PM  PAVA DG+TYER AIERWL+ ND SP+TG ++ T++V
Sbjct:   98 PDTFMCPITRAPMRSPAVACDGHTYERGAIERWLAGNDKSPITGSRMMTRLV 149          
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A251UFJ2_HELAN (Putative zinc finger, RING/FYVE/PHD-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UFJ2_HELAN)

HSP 1 Score: 74.3 bits (181), Expect = 6.290e-13
Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 0
Query:  125 PVAEDVQPQQSLATNSTTSGGSSPSPTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVASTMD 213
            PV E ++     A  ST+    +P P   +CPI +  MVDP VAADGYTY+R AIE+WL E+D+SP+T   L ++ +  N++L+++ M+
Sbjct:   99 PVLERLKVVADAAQRSTSMTRPTP-PNHFICPIRKDVMVDPCVAADGYTYDRRAIEQWLEESDSSPMTNLPLTSRSLTPNYTLLSAIME 186          
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A7S2FZS1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZS1_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 7.100e-13
Identity = 33/54 (61.11%), Postives = 43/54 (79.63%), Query Frame = 0
Query:  154 LCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSL 207
            +CPIT+  +VDP VAADG TYERAAIERWL+ +  SP TGQ + T+V+F N++L
Sbjct:    8 VCPITQEAIVDPMVAADGVTYERAAIERWLATSRLSPATGQIMATRVLFPNYTL 61          
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: UPI0004988E24 (U-box domain-containing protein 52-like n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0004988E24)

HSP 1 Score: 71.6 bits (174), Expect = 7.580e-13
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0
Query:  150 PTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVASTMD 213
            P   +CPI +  M +P VAADGYTY+R AIE+WL END SP+T   L  K V  N++L+++ M+
Sbjct:   28 PNHFICPILKDVMDEPCVAADGYTYDRKAIEKWLEENDNSPMTNLPLPNKDVILNYTLLSAIME 91          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDQ7_9PHAE1.690e-2986.67U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G3T4_ECTSI3.180e-2084.00Protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A7S1UFM5_9STRA1.320e-1460.71Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1J3K5K6_NOCCA5.140e-1444.94U-box domain-containing protein 35 (Fragment) n=3 ... [more]
A0A7S4R752_9STRA1.530e-1343.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2EJ12_9STRA2.070e-1348.19Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7J6LA49_PEROL3.770e-1361.54U-box domain-containing protein n=1 Tax=Perkinsus ... [more]
A0A251UFJ2_HELAN6.290e-1342.70Putative zinc finger, RING/FYVE/PHD-type n=1 Tax=H... [more]
A0A7S2FZS1_9STRA7.100e-1361.11Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
UPI0004988E247.580e-1350.00U-box domain-containing protein 52-like n=1 Tax=Ma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 152..211
e-value: 1.1E-13
score: 61.5
IPR003613U box domainPFAMPF04564U-boxcoord: 150..207
e-value: 5.6E-11
score: 42.5
IPR003613U box domainPROSITEPS51698U_BOXcoord: 148..213
score: 19.772
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 145..207
e-value: 1.0E-21
score: 78.0
NoneNo IPR availablePANTHERPTHR46573FAMILY NOT NAMEDcoord: 42..207
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 142..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4573contigH-paniculata_contig4573:4494..9686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4573.11459.1mRNA_H-paniculata_contig4573.11459.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4573 3755..12516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4573.11459.1 ID=prot_H-paniculata_contig4573.11459.1|Name=mRNA_H-paniculata_contig4573.11459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=214bp
MERWWSGGLDRIKKDVMFASGIMDRAAFEDSQARSANPAPILAEQSPSEG
VPSSSPSSLPSPSVAAAAAAGRSQPVIPTPCKEEQKRERQQQRVASGTHG
MGSEIPLNRKLPDDLDGGLGGGQGPVAEDVQPQQSLATNSTTSGGSSPSP
TRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKV
VFKNWSLVASTMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD