mRNA_H-paniculata_contig4573.11459.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4573.11459.1
Unique NamemRNA_H-paniculata_contig4573.11459.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A6H5KDQ7_9PHAE (U-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ7_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 4.210e-27
Identity = 52/60 (86.67%), Postives = 57/60 (95.00%), Query Frame = 1 
Query:  736 RHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVAST 915
            +HLCPITRCPM DPAVAADGYTYER AIERWLSE+DTSPVTG+ LETKVVFKNWSLV+S+
Sbjct:   42 QHLCPITRCPMEDPAVAADGYTYERTAIERWLSEHDTSPVTGKALETKVVFKNWSLVSSS 101
[Close]
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: D7G3T4_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T4_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.130e-18
Identity = 42/50 (84.00%), Postives = 46/50 (92.00%), Query Frame = 1 
Query:  766 MVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVAST 915
            M DPAVAADGYTYER AIE WLSE+DTSPVTG+ LETKVVFKNWSLV+S+
Sbjct:    1 MEDPAVAADGYTYERTAIECWLSEHDTSPVTGKALETKVVFKNWSLVSSS 50
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BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A7S1UFM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFM5_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.140e-13
Identity = 34/56 (60.71%), Postives = 45/56 (80.36%), Query Frame = 1 
Query:  745 CPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVAS 912
            CPIT  PM +P VAADG+TYER+A+ERWL ++DTSP+TG+ L TK +F N +L A+
Sbjct:   37 CPITGAPMCEPVVAADGHTYERSAMERWLRDHDTSPLTGEVLPTKALFPNRTLAAT 92
[Close]
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A1J3K5K6_NOCCA (U-box domain-containing protein 35 (Fragment) n=3 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3K5K6_NOCCA)

HSP 1 Score: 77.8 bits (190), Expect = 8.260e-13
Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 1 
Query:  655 PVAEDVQPQQSLATNSTTSGGSSPSPTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVASTMD 921
            P  E ++     A NS  SGGS   PT  LCP+ +  M +P VA+DGYTY+R AIE WL E+DTSP+T   L  K +  N++L ++ M+
Sbjct:  106 PALESLKKIADKARNSL-SGGSKQPPTHFLCPLLKDVMNEPCVASDGYTYDRRAIEEWLEEHDTSPMTDSPLHNKNLLPNYTLYSAIME 193
[Close]
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A7S4R752_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R752_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.880e-12
Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 1 
Query:  619 DDLDGGLGGGQGPVAEDVQPQQSLATNSTTSGGSSPSPTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVASTM 918
            D+LDG      G   E++    + + +S T+  ++   T   CPIT  PM DP VAADG+TYER AI RWL  +D SP+TGQ L  K +  N+ L++ST+
Sbjct:   39 DELDGLQDMNNGNAMEELSSSTTTSLSSLTAVATTT--TLPCCPITGQPMKDPVVAADGHTYERHAIRRWLQTSDMSPLTGQTLSHKELVPNYLLLSSTV 136
[Close]
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A7S2EJ12_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EJ12_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.160e-12
Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 1 
Query:  682 QSLATNSTTSGGS----SPSPTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVASTM 918
            + L++++TTS  S    + + T   CPIT  PM DP VAADG+TYER AI RWL  +D SP+TGQ L  K +  N+ L++ST+
Sbjct:   12 EELSSSTTTSLSSLTAVATTTTLPCCPITGQPMKDPVVAADGHTYERHAIRRWLQTSDMSPLTGQTLSHKELVPNYLLLSSTV 94
[Close]
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A7J6LA49_PEROL (U-box domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LA49_PEROL)

HSP 1 Score: 74.3 bits (181), Expect = 6.360e-12
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 1 
Query:  730 PTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVV 885
            P   +CPITR PM  PAVA DG+TYER AIERWL+ ND SP+TG ++ T++V
Sbjct:   98 PDTFMCPITRAPMRSPAVACDGHTYERGAIERWLAGNDKSPITGSRMMTRLV 149
[Close]
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: UPI0004988E24 (U-box domain-containing protein 52-like n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0004988E24)

HSP 1 Score: 72.0 bits (175), Expect = 7.110e-12
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 1 
Query:  730 PTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVASTMD 921
            P   +CPI +  M +P VAADGYTY+R AIE+WL END SP+T   L  K V  N++L+++ M+
Sbjct:   28 PNHFICPILKDVMDEPCVAADGYTYDRKAIEKWLEENDNSPMTNLPLPNKDVILNYTLLSAIME 91
[Close]
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A7S2FZS1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZS1_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 7.240e-12
Identity = 33/54 (61.11%), Postives = 43/54 (79.63%), Query Frame = 1 
Query:  742 LCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSL 903
            +CPIT+  +VDP VAADG TYERAAIERWL+ +  SP TGQ + T+V+F N++L
Sbjct:    8 VCPITQEAIVDPMVAADGVTYERAAIERWLATSRLSPATGQIMATRVLFPNYTL 61
[Close]
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Match: A0A251UFJ2_HELAN (Putative zinc finger, RING/FYVE/PHD-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UFJ2_HELAN)

HSP 1 Score: 74.7 bits (182), Expect = 8.090e-12
Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 1 
Query:  655 PVAEDVQPQQSLATNSTTSGGSSPSPTRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKVVFKNWSLVASTMD 921
            PV E ++     A  ST+    +P P   +CPI +  MVDP VAADGYTY+R AIE+WL E+D+SP+T   L ++ +  N++L+++ M+
Sbjct:   99 PVLERLKVVADAAQRSTSMTRPTP-PNHFICPIRKDVMVDPCVAADGYTYDRRAIEQWLEESDSSPMTNLPLTSRSLTPNYTLLSAIME 186
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4573.11459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDQ7_9PHAE4.210e-2786.67U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G3T4_ECTSI1.130e-1884.00Protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A7S1UFM5_9STRA2.140e-1360.71Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1J3K5K6_NOCCA8.260e-1344.94U-box domain-containing protein 35 (Fragment) n=3 ... [more]
A0A7S4R752_9STRA1.880e-1243.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2EJ12_9STRA2.160e-1248.19Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7J6LA49_PEROL6.360e-1261.54U-box domain-containing protein n=1 Tax=Perkinsus ... [more]
UPI0004988E247.110e-1250.00U-box domain-containing protein 52-like n=1 Tax=Ma... [more]
A0A7S2FZS1_9STRA7.240e-1261.11Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A251UFJ2_HELAN8.090e-1242.70Putative zinc finger, RING/FYVE/PHD-type n=1 Tax=H... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4573contigH-paniculata_contig4573:3755..12516 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score79.0
Seed ortholog evalue3.1e-12
Seed eggNOG ortholog59689.fgenesh2_kg.7__1751__AT4G25160.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.U-box domain-containing protein
EggNOG OGs2QQ92@2759,37M00@33090,3G7XU@35493,3HVRD@3699,COG0515@1
Ec32 ortholog descriptionU box domain
Ec32 orthologEc-22_002200.1
COG Functional cat.T
Best tax levelBrassicales
Best eggNOG OGNA|NA|NA
Exons6
Model size1663
Cds size642
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4573.11459.1prot_H-paniculata_contig4573.11459.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4573 4494..9686 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930368.7984517-UTR-H-paniculata_contig4573:3754..44931622930368.7984517-UTR-H-paniculata_contig4573:3754..4493Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4573 3755..4493 -
1691481260.9190917-UTR-H-paniculata_contig4573:3754..44931691481260.9190917-UTR-H-paniculata_contig4573:3754..4493Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4573 3755..4493 -
1622930368.876005-UTR-H-paniculata_contig4573:9686..97561622930368.876005-UTR-H-paniculata_contig4573:9686..9756Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4573 9687..9756 -
1691481260.9730194-UTR-H-paniculata_contig4573:9686..97561691481260.9730194-UTR-H-paniculata_contig4573:9686..9756Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4573 9687..9756 -
1622930368.8915243-UTR-H-paniculata_contig4573:10202..103121622930368.8915243-UTR-H-paniculata_contig4573:10202..10312Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4573 10203..10312 -
1691481260.9834332-UTR-H-paniculata_contig4573:10202..103121691481260.9834332-UTR-H-paniculata_contig4573:10202..10312Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4573 10203..10312 -
1622930368.9076505-UTR-H-paniculata_contig4573:12414..125161622930368.9076505-UTR-H-paniculata_contig4573:12414..12516Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4573 12415..12516 -
1691481260.993023-UTR-H-paniculata_contig4573:12414..125161691481260.993023-UTR-H-paniculata_contig4573:12414..12516Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4573 12415..12516 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930368.8101308-CDS-H-paniculata_contig4573:4493..46081622930368.8101308-CDS-H-paniculata_contig4573:4493..4608Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4573 4494..4608 -
1691481260.9318316-CDS-H-paniculata_contig4573:4493..46081691481260.9318316-CDS-H-paniculata_contig4573:4493..4608Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4573 4494..4608 -
1622930368.8239324-CDS-H-paniculata_contig4573:7501..76531622930368.8239324-CDS-H-paniculata_contig4573:7501..7653Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4573 7502..7653 -
1691481260.9430172-CDS-H-paniculata_contig4573:7501..76531691481260.9430172-CDS-H-paniculata_contig4573:7501..7653Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4573 7502..7653 -
1622930368.836876-CDS-H-paniculata_contig4573:8430..87671622930368.836876-CDS-H-paniculata_contig4573:8430..8767Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4573 8431..8767 -
1691481260.9537895-CDS-H-paniculata_contig4573:8430..87671691481260.9537895-CDS-H-paniculata_contig4573:8430..8767Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4573 8431..8767 -
1622930368.85978-CDS-H-paniculata_contig4573:9648..96861622930368.85978-CDS-H-paniculata_contig4573:9648..9686Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4573 9649..9686 -
1691481260.9636006-CDS-H-paniculata_contig4573:9648..96861691481260.9636006-CDS-H-paniculata_contig4573:9648..9686Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4573 9649..9686 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4573.11459.1

>prot_H-paniculata_contig4573.11459.1 ID=prot_H-paniculata_contig4573.11459.1|Name=mRNA_H-paniculata_contig4573.11459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=214bp
MERWWSGGLDRIKKDVMFASGIMDRAAFEDSQARSANPAPILAEQSPSEG
VPSSSPSSLPSPSVAAAAAAGRSQPVIPTPCKEEQKRERQQQRVASGTHG
MGSEIPLNRKLPDDLDGGLGGGQGPVAEDVQPQQSLATNSTTSGGSSPSP
TRHLCPITRCPMVDPAVAADGYTYERAAIERWLSENDTSPVTGQKLETKV
VFKNWSLVASTMD*
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mRNA from alignment at H-paniculata_contig4573:3755..12516-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4573.11459.1 ID=mRNA_H-paniculata_contig4573.11459.1|Name=mRNA_H-paniculata_contig4573.11459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8762bp|location=Sequence derived from alignment at H-paniculata_contig4573:3755..12516- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAGGAGGGTTTTGCACGGAGGAGGTGGGGGATAGCTTTTGTCTGATCTC
GTACCCCTCGCCTGAGGGATGGCGGTGTGCTGTGGAGGTTCATCGCTTTC
TTGTGAGTATTGTTGAGGATGAATATGACTTGAACTATGTTTATTGACCT
TGGATTCGAATACCGTATATATACATATAATCATACCACCAGTTGCAGAA
TATTTTATTGTACACTGCGAAAAGGCAAGATGACGCGTTGGAAATATATT
TTCATATCTTAGCGTTTGGAGTGTTTACCATTGATCCGAATATACTGCAC
GAGGTGTAATATATACCGTTGTGTAATACGACGCGATGCAATACTGGAGT
ATACACATTTGAAATGACTCCTTTTCTGCGGTAGCAACCGGTTGTCGTGG
GTCAATTTCCAGCTTGAGTTGTTGGAGGGACGTTAACTGTCTCTTGTTTT
TTTCTTTAATCGCTCTGATGTATAGTAGTTCAATCAGATAATATGTTAGT
CGCTTGGAAATATCTGGTAGTGTTTTGTGATTTCCGAGTGTGGGATTTTT
GAGTAGTTCGCGATCAACCTTGTTGCAAGGTTTTCTCGCGTTTTGTATGT
GCTTAATATTTCCCGTGTTGCCACGGCACAACTGCGATTAGCCTTGTATT
TTTTTTTTTTTTCACTCTCTATTAGCTTGCGTGCAGTCCTGGGACTTTGT
GCTTACCCCGTGCGCACTTTTTTTGTGTGGCGACTTCAGGTACGAAACAT
ATGTCGGTTGAAAGCAAATAGCACTGACGGGCATTGCTGCATCTTCCACG
TTGGAGAGTCAAGTTTCGAAATTATTTCATGTTCGCGTACAGCACGCACG
CGATTGATACAGTGATATTTCCTTGTAAAGGTTGTCGTAGCCTATGTCGT
GCCTCGTTAAATAGATGCGAGAAGCCCTGGCACTGGTCAAAATGCATATC
ATGTGAGGGGGGCCCTCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCGCCCCCCCCCCCGCCCCCGGGGGACGCGGAGGAGCGGCAGCGGTGA
GTATCGAGAGAGGAACGGAACAGAGGAAACACCAAGCGCACCACCCTCTT
TTCCCCTTTCCCCCCCCCCCGCCCCCCACCACCCCCCGCTAAAAAGAAGG
GCGAAGCCCCCCCCCCCCGCCAAACCAACACTACGGGGGGGGGGGCCCCC
CCCCCCCCCCCCCCCCCCCCCCCAGCTATCACAGCGGGCATGAACGGGAA
AATGTGGAAAACGTTGATACAGATGGCACAGTTCACCAATGGTACTGTTT
GTTATGCTTGATGGGAAAATTTCTGACTTCTTCAATATTTTTCCAGGGGC
CCCCGTAAGGATGTAAGCTATCCAACATTGTTTCACGTGTTTCGCAACGA
TGTGCTGAAAGCAGTGGAAGCAGTTGGGCAAGGGATACGAGTAGAAAAGA
GAAGGGTATCTAAACTGTTTTTTGCCGATGCCTTCGTGGCCGTGGCCATG
TCTGGTACTCCGGAGGGACTGCAGAAGCAGATCGACGAAACCATGGAATT
TACGACGAAGTGGAGAATCTCAGCACATGTCAAGACGTCTGTCGTAATGT
TATGTAACGGCAGTTAGATATACGAGGTACTACAATGGGGGAACGAGGAG
CTACTATCAGCAGTGAATCAGTACATATATCTTGGCGTTGAATTCTCGAA
GGACTGTAGTGAGAACATGCCACCTGTACGAGAGGAAGAGACAACTTTAT
ATGAATGAATTGCGGAAAATCGAAGGGGGCGTTAGAGAGGCCTTCGAATT
CTAAGATTGCGATAAGAAGGCGATGATGATTCTAGGACATAAAAATTGAC
CTAAAAGGCAAGGGCTGAGGTAGATGGAGTATGAAACATTTTTAAGCCAT
ATTTGGCAACGTAGGAAGCAACGTTTAAGCGTAGGAAATTGCTTTGATAA
GAACAAAGCTCCGTCGTCGCGAGGTCGCGTGGTCAATGGTCTAAAAAATA
CAGTTGCAACACATGAGTACATCGCTCCCCCGCCCCCCTCCATACACACC
ACGTACCAGGCATCACATAACTGTTCATTTCCACACTCTCGAATGTGTAT
GACATGAGTAGTAAGTGCTGCGACGTTGAACCGTAGCGTTGGAAACAAGC
CAGTTATTGAGCTGAACTGTCTTGCTTTTTGTGCCAAATATTGTTCTTAT
TCAGGTGCACCGGGATCCCACCGTAGACCCCCCGTGGTCACTGGCGTCTG
TCAGGGATCATGCCTTGTCAACGCCTGCTGCGGTGACCATTCGAGATGCC
CTGCTGCGAGCGAGGTCGGTGTTTCCCTTCGTATATACAAGACCCTCAAA
ACGTGGGTGTAAGAGACGCAATCTTGCTGAGCAAACAAGCGAGGGAGGGA
AACTAGTAGTGAGGGGCCCTTACGAGGTTTCGATTTAGGTGTTTGATCGC
GACTGGGCATTGGTAGGCCGTTGTAACTTATAATACCTTTTGGTTTCATG
TTTTGTTCTATCTTCAATACTGCACCGGTATTTACAGTCGAGCTGCAGTA
GGCCGCGACTTGTTATTAAAATCGGGGCCTCATCGTCATCTCATACCGCC
ACTTGATAGAGAGGGGAAGTCCCGTGTTTCGCGCCGATGCTGTTCCGCCT
GGTTCGGTCTGGGTCGGTTCTGGTCGGTTCTGGTCGGTTCAGTTTTGCCA
GATCTCGATTTTGTCTCGATCAATGCCATGTTTTATGCTGCCGTTTTCGA
ATTTTGATAGGGAAGAGGAATCTTTTATCGATGGGGTCCAAGCGGTATCG
GCGGAGGTATTGGAGAGCACCCGGTGGACGATGGAACGATGGTGGAGCGG
CGGCTTGGACCGCATAAAGTGCGTATTGCGGAGGGAATACGACCGAGAAC
CTTTTTGCCCGTCGTTTTGCTTTGTACTACTAGTATGCCTTGCACGTCGT
GCGCGCATGTATACTAAAAATGAGGCACTGCGCTGAACAGGACGCTGCAC
GCGCCAAGCATTGGTGCAACGTCGTGCGAGACGGACAAGCACTCTATGAT
AAGAAAACTGTTCGAATAGCGGGGATTTTGATTTCTTGTGCAAGGCTGGG
CCTTCGGGGTGTCTACGTTGTTTTTCTGGTCCGTTCTGTATTGCATCAGT
TTTATCGTCGATTCAGCCAAAAGCTGGATAGCATCATCTCGTTTTGTGCG
AGACCCGAGCTTCGATGTTCCCCAGTTATTCTAGGACGCACGTGAAGGCG
GAAAGATACTTTGAACTTTATTTGGCGAGTGTGTGCTAGCTCCAATTCAA
CGGGAGCAGAGCAGCCCGTCCTTCGGTATGATAGAGGTCGTCGTTGTGCC
GACGTTGCTTTTTTGCCACGGCGCCTGCTCTACATTGTAACGCGTGCTGT
TCTCAACCACGATATGCCGGCGAAGCTTATGGCTTTATAACAAGCACATT
TCCGTCGCTCCACAAACCGGCTGAAATTGTGTCTAGTTCATTTTTTTTAT
CGTGTGACGTGTTTCCCGCATTTCGGGCGACATGACCTACGGCAATCAGC
GATACTTGTGTACCGTGTAGTGCCTTGCTGGCCCTCGATTTTGGCTCGGA
AAGGTGGCCATTTTTGTTTTTCCTCGTTGTTGCCTCCCCCCGCCCCCCCC
CCCCCCCCGTTCCCCCGGCCACGCCAACAAAATGTATTCCTTAGTTTCAG
CGGCGCTCAAACATCCAAAATCGCTTAGAAAAAATCTAATGTTTTACAGG
AAAGATGTTATGTTCGCGTCTGGAATCATGGACCGCGCCGCCTTCGAAGA
CTCCCAAGCACGGTCAGCAAACCCAGCACCAATACTAGCTGAACAAAGTC
CCAGCGAAGGGGTGCCGTCATCGTCACCATCTTCATTACCATCGCCATCA
GTAGCAGCAGCAGCAGCAGCAGGACGGTCCCAACCCGTGATACCAACACC
ATGCAAGGAGGAACAGAAACGTGAGCGACAGCAGCAGCGGGTGGCTAGCG
GTACACATGGCATGGGCTCAGAGATCCCGTTGAACAGAAAGTTACCGGAC
GACCTCGACGGTGGCCTCGGCGGAGGGCAAGGCCCAGTGAGTGCTGGTAG
ACCGAGGCATGAGGGTATTTGCCGGGTTTGCGATCGACGGGTTTTTTGGA
TCTTGGCATTACCTGCAACAGCTCCAGTTTGCCCGACTGCGTAATGTGAT
GCCCAGTACAGTACGGTCCAAGTGCATCATGTTTATTCTGTTTTCAATTG
ATCGGGGTCCTAATTTTATGCCGACCTCCTTACTTACTGTCCCTTCAAAA
CGAAACAAGTCGGATTTGTGTTCGGGGGGAGGGGGGGTGTACAGAAAGTA
GGCAGTCAGTGCTGACTGTGTAGCTCTGTGGTGAGCTATTTCCTCTACAA
AAGCTAATTGTGAATTCGAATCCTGACGGACATAGATTATCTTTTGTGTG
CTTTCGATATGGAACGTGCGGCACTCACTTCTAGAGAGAGAAAACCCCGG
AATAAATTGGTCCTGTGTGAAGGATGAAAGTGACGTGGAGAGATGAGATC
TGTCCACTGAACAAAAAACGAAACAGAAAGTGATGTTAGCGTTGGCAAGG
GGAGTCGCCGTCCTCGAAGCGAAAGTGGTCGGTTGTTCGGACTTTGTGAT
TAACTTTTGTACAGAAAGTAGCTCACCACTGAGCTAATTTCTGTATAGGG
AGGGGAAATATTTCGTGTGGCCTCCAAGAAGTGCCGACTACGATATAATG
TATGCAGAATATCATGTCATACTGTGGGGTATTTCGTGTCGTCATTGATC
TTCTTGTGTTGACCTGCTGTTCCTTCAACACGAAACAAACCCGGCCTCGT
TGTATTATTTTAGGTGGCGGAAGACGTGCAGCCGCAGCAATCGCTAGCCA
CCAACTCGACGACCTCGGGAGGCTCTTCGCCATCGCCTACGAGACATTTA
TGTCCCATCACGCGGTGCCCCATGGTCGATCCGGCTGTTGCGGCTGACGG
TTACACCTACGAAAGGTGTGACAGGTGTTAAGATAGCTGTTATATGAAGG
TATTTATTGTGCGGCGGAATCAACGGTCTGTCCGGTTAGTGACCCCGAAT
ATCCGCCGCACATTTCGGATAACTTTTTTTTCGAGAAGTGAGAACTTCAA
ATCATAGAGAACGACGATACATGCTCAAGACAACAATACTGTAGTCCTCA
ACAGGGTGGTCAGCTGCTGTGAGCTTTGTTCGTTGAGCTCTGTGTGCTGG
ATCCCGCTCTGAGGCTACAATATCGGAGTCGGGCGAACAGCCGACGAAAC
ACCTGTCTCGGATATCTCTGCGGTGCTGAAAGCATGGAAACGATAGCGAG
CGCTCTACTTCAGTCGCTGAGGCTAGGGCACAAGTCCAACACAGACTGAG
TGTATGTGCAGCGGTACTCGAAGAAAAAAATCAACGATCCACAACCCACA
ACCCAAGTCATGGTATATGTATGTATAGTCAATTCTTCAGTTTATCACTT
TCTTTGCCATCGCTCCTCGGACGGCGAAGCAACAGACCGGTCGGTTTATA
GGTACAATCAATATTGCTTCATTGCGCTCTCTCCTCTGAACAACCGGCCA
CTTGATGGTACATGTATGTACTGTGAGTAATTTTGCTTTATTGCGTTCGC
TTTCTCGTTATAACAAACCACCTGATGGTTTCAGTAGTACCGCTTTGTCG
CTCCCGCTCCTCGGAATTTCGCTTATGGCGCTAACTCCCTTGCTGATGGC
ACTAGCTTCTTCGTTCAAGGTACTGCAATAGAGCCCTACTACCATGCAGT
AGTACTGTCTGCAAATTGGTACTATGATGGGTATGCTCTAACTTTACATA
TTTGGGTTTTAATTTTGACTAACTCTCCGCCCAGTCAAAATTTGACCCAA
GTGTGACCACGAAAGCATGAGGACTATCGTATTGAAAACGGAAACCTGAG
GTCAGCTCTATTTCTATCCCTTGGTACACGGTTGCCATCCCGGGACCGAA
TCGGTTGTCATCGCTGCATCAAGAGATGATGCGATATTCCCTTGAGTAGA
CTCGTCCGTACGCTCAAAATTCCCATAAACAACGACTGCCCTCGAGTCAG
ATCTGTCGTACCCGAGAAGCCGCGGTTGGAATCCCCACGTCGCGGCCTGG
TGAACAAAATTGAAGTGGGGTATATCCAAGTCAAATACATGGCGACAGTT
AGCAGATTATCGTTTGCGACACAATAGAGCGATGTCAGTGCAGACGGTAC
GGTAGTTTCACTACGATTACACGCAGGACATGTATGACAACATAAGCAGG
ACAGGAACGGCCTCTGTACAGAGACAGCCTGTGGCCGCCGCAGTGAGGGG
TGGGTTGCCACCTTTGTACTGTCGCCAACAGTTATGGCTGTGACAGCATG
AAGATGACACAAAGAGGAAGGCAGTGCGATTCCATACAGGCGGTTCTTCT
CATGCCTTCATGGCCCGTTGTGGAACTCTGTAGCTGAAGATCCCCAACGC
ACCTCATGTAGCTGATTTTCCTCTTGCCCCGAATCGTCCAGCTTTTGGGA
TAGAATACTCTCAAAGTTTGACGTACGTGTCTGTTTTTACGATCCACGGT
TGGTTACTTCATTTTGTCGCACTATTACCGCAAACGTTTCGGTCGTTAGT
CGACGAGATAACCCTGCTCCCCATGAAGCTGCCATGGTAATGTCCCACCA
AGTGAATCATTTCTCAATGGCGCGGCTGACGGTGTACACGTGGAAGAAGT
ATGATAGGGGCTCATTCCCATTAAAATGATTATTTGGTGATATCGAACAG
TGAATCGCGTGGTCGATCCTCTTGTGGCCAGGCGACGTTCATGGGTATGG
AATGTGTGATGAGGACTCATTCCCCTGAATTGGACTTTTCTGTGATACCA
AATATTGAAACATGGCGCGCATATCGATCGCCGTCCCTGAAATCGCCAGG
AGTCTCCCACAGCTATCGTGATTGCCATAGTACAGGTTACATCACACCCG
GCAATAGCTACGTATTTATGTAAGAGTAATGATGCGTTTCAAACCCGATT
CTCTGGAACGGTGCGGTGCTGGTAACACCGTAATTTCTTATTGAAAACCT
CTCAAGTTCTGCCTTGAGATACGCAGACGTGCGTGCTCGACAGTGCAGTT
GGGTCGTGGTTGTAGAGAAATGAGTTTCAAGAAATTTAATTACCGGCGAT
GGTATCACCCTACACACGCGGTGACACTAGTTTAGTATATATTTTTCTTC
GACTCATGCTGTTTGATGGCGCTTGTGTCAGCAGGCACCGCGAAAATTGG
TCGAGGATTACCGACAAATATACCGCCTACTGCAGTTCTGCAGTTTTTCG
CTTTCTGATCGACTCTGTCGCCGCGTCTGTCGCAGTGTTGTCGAGTACAA
TTATTATCACGTTTTATCAAGATTTTGCAAAAATCTTTGCCTCAAACTGC
CTCTTGTCGACAAAACCCCAAAGCGCTTAGGGTGTGTAAACGTGTGGGAC
GAGGACATTTTTCGCCTGTTCGGCGAATAACTTGGTCCACTGTACTGTAT
GGTGCCACTGACGAACCAGCAAATACGCGTTTCGGCTCCCGTTTTCGCTC
ATTCTCTTTGGAGTGTGGGCTATACAATGCAAGTGGAGATATGCGACTTC
GTCAAAAGCGCGCAGAGGGATCATGCGATTTCCTTCGAGACCCAAGTGGG
GATCATCTTGAACGTTTGTTGTTTGGGTCCGATTACAGAGCGCTTCAGTT
GGTCTACCTCGGTGCTTACCCCATTGTACGGCGGTAGGACACATGTGCAT
TAGTCTAGTATGTCACTGAGCGGAGAGTCGTAACACTTGGCCTTCGTCGA
TTCGACTCCGTATTTTATCTGTTGCGTGTGTGCGCGATGCTCATTTCAAC
TGCTGAAGGGCGGCGATCGAGCGCTGGCTGTCGGAGAATGACACCAGTCC
GGTGACAGGACAAAAACTGGAGACCAAAGTCGTGTTCAAGAACTGGTCGC
TGGTGGCTTCTACCATGGATTGACCTTGAGTGCGGTCTCATGGAGCTAGT
TTTTCATGGGGTTGCAGAGACTGCTTTTTGTCTACTTCTGATGCTGTACA
GAATCCGTTGCGTATCGTCAATTGGGCTATTTCTAATTTGTGATGGTGTT
TGTTTTTCCCTGCGTAGAGGTGGTTTCTTGTCTACCATGGTAATTGCTGA
TTTTGCGAGCACAGTTGCATGCGCGTGGGTCGTGGGTATGACATACTGTC
AGTCGATTCATCCCGCTGAACGGCAAATCCAACGCGCTCAGTTTTATGAT
CACTCTGTCTCCAGTCTTACGCTTGGGTCTGAGCACCCATACGGGTTTTG
TTTCGACCGGTTCATTTGTATTTTGTTGTTTTTCTTTTCAGACTAAGGTG
ATGGCGCTTGAAGTACATCGCGACATGCTGTACATGACGAGGGTTCCAGC
ATGTATGTGTAAATACCGGCACAGCTCAGGGACTTAATATTGTTGTTCAA
TTTTTTGCGGTGTCCCTGGCTGCTGGAACCGTTCTCTGTAGAAAAGAGTG
CATCAATGGGACATAGCTGCCAGTGCAAGTACCGTGGACGAGGCTCCTGT
TTTCCGAAATCGAAAGCAAGCTCCAGTTTGGAAAACGTTTGAGGTCAACA
AAACCCCAAAGCGCTTAGGGTTGTGTGCAAGATGTTGCCCTCGTACATTC
GGTACAACCAGGTAGATTTTGTGTCCAATTTGGATCTCGCTATCGCCATT
TCCGATTTTCGG
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Coding sequence (CDS) from alignment at H-paniculata_contig4573:3755..12516-

>mRNA_H-paniculata_contig4573.11459.1 ID=mRNA_H-paniculata_contig4573.11459.1|Name=mRNA_H-paniculata_contig4573.11459.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at H-paniculata_contig4573:3755..12516- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAACGATGGTGGAGCGGCGGCTTGGACCGCATAAAATGGAACGATGG
TGGAGCGGCGGCTTGGACCGCATAAAGAAAGATGTTATGTTCGCGTCTGG
AATCATGGACCGCGCCGCCTTCGAAGACTCCCAAGCACGGTCAGCAAACC
CAGCACCAATACTAGCTGAACAAAGTCCCAGCGAAGGGGTGCCGTCATCG
TCACCATCTTCATTACCATCGCCATCAGTAGCAGCAGCAGCAGCAGCAGG
ACGGTCCCAACCCGTGATACCAACACCATGCAAGGAGGAACAGAAACGTG
AGCGACAGCAGCAGCGGGTGGCTAGCGGTACACATGGCATGGGCTCAGAG
ATCCCGTTGAACAGAAAGTTACCGGACGACCTCGACGGTGGCCTCGGCGG
AGGGCAAGGCCCAGAAAGATGTTATGTTCGCGTCTGGAATCATGGACCGC
GCCGCCTTCGAAGACTCCCAAGCACGGTCAGCAAACCCAGCACCAATACT
AGCTGAACAAAGTCCCAGCGAAGGGGTGCCGTCATCGTCACCATCTTCAT
TACCATCGCCATCAGTAGCAGCAGCAGCAGCAGCAGGACGGTCCCAACCC
GTGATACCAACACCATGCAAGGAGGAACAGAAACGTGAGCGACAGCAGCA
GCGGGTGGCTAGCGGTACACATGGCATGGGCTCAGAGATCCCGTTGAACA
GAAAGTTACCGGACGACCTCGACGGTGGCCTCGGCGGAGGGCAAGGCCCA
GTGGCGGAAGACGTGCAGCCGCAGCAATCGCTAGCCACCAACTCGACGAC
CTCGGGAGGCTCTTCGCCATCGCCTACGAGACATTTATGTCCCATCACGC
GGTGCCCCATGGTCGATCCGGCTGTTGCGGCTGACGGTTACACCTACGAA
AGGTGGCGGAAGACGTGCAGCCGCAGCAATCGCTAGCCACCAACTCGACG
ACCTCGGGAGGCTCTTCGCCATCGCCTACGAGACATTTATGTCCCATCAC
GCGGTGCCCCATGGTCGATCCGGCTGTTGCGGCTGACGGTTACACCTACG
AAAGGGCGGCGATCGAGCGCTGGCTGTCGGAGAATGACACCAGTCCGGTG
ACAGGACAAAAACTGGAGACCAAAGTCGTGTTCAAGAACTGGTCGCTGGT
GGCTTCTACCATGGATTGAGGCGGCGATCGAGCGCTGGCTGTCGGAGAAT
GACACCAGTCCGGTGACAGGACAAAAACTGGAGACCAAAGTCGTGTTCAA
GAACTGGTCGCTGGTGGCTTCTACCATGGATTGA
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