prot_H-paniculata_contig4553.11425.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4553.11425.1
Unique Nameprot_H-paniculata_contig4553.11425.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length124
Homology
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: D8LGL6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGL6_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 6.710e-46
Identity = 71/116 (61.21%), Postives = 85/116 (73.28%), Query Frame = 0
Query:    1 MSTSVARKMARGGGGPPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFDPRSLYDSLGKNAA 116
            M+++ AR++ARGGGGPP P F RNKP+D+ L E+HEL+W+DGVA ET +DFDAPH+S  E  AWW GGL FFA  LG   LSDPESKR AV R   LP TAFDPR L+ +    AA
Sbjct:    1 MTSTAARQVARGGGGPPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLPATAFDPRDLFKAEEGEAA 116          
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: A0A835ZFI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI9_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.800e-22
Identity = 45/91 (49.45%), Postives = 55/91 (60.44%), Query Frame = 0
Query:   18 MPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFDPRSLY 108
            MP   R       L E+ EL+W+D VA E CLDFDAPH+SR +GL WW GGL FFA+      LS PE +R A+ R   +P  AFDP  L+
Sbjct:   31 MPPMARQPRPTQRLHEEQELMWDDSVAPELCLDFDAPHISRTQGLLWWLGGLGFFAAVFNIVKLSYPEGRREALPRTATMPPAAFDPVDLF 121          
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: A0A7S2P129_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P129_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.610e-22
Identity = 48/94 (51.06%), Postives = 57/94 (60.64%), Query Frame = 0
Query:    1 MSTSVARKMARG-GGGPPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQR 93
            ++ ++A + AR  G  PP P F RN      LVEDHELVW+DGVA E  +DFD+ H+S  EGLAWW GGL FF     F    D ESK  AV R
Sbjct:   16 INKALAAQQARSLGSSPPTPPFARNLAPTTKLVEDHELVWDDGVAPELTIDFDSQHISTGEGLAWWLGGLGFFTGLFQFCKTIDMESKNPAVNR 109          
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: G4ZU03_PHYSP (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=G4ZU03_PHYSP)

HSP 1 Score: 89.0 bits (219), Expect = 2.970e-20
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 0
Query:    1 MSTSVARKMARGGGG----PPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFDPRSLYDSLGK 113
            +S +V R+     GG    PP P F R K    PL E+ ELVWNDGVA ET +DFDAPH+ +++ L  W  GL  FA+ +G   L +P+S R A +R N+LP+  ++     +  G+
Sbjct:   14 LSVNVRRQALATRGGHAHRPPPPPFARIKEAAAPLHEEAELVWNDGVAPETLIDFDAPHIPKYQALRHWLYGLGAFATLMGVVTLYNPDSWRQASKRGNHLPDLKWELGEADEPAGE 130          
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: A0A7S2C717_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C717_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.710e-20
Identity = 46/97 (47.42%), Postives = 56/97 (57.73%), Query Frame = 0
Query:   21 FQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSD---PESKRLAVQRINNLPETAFDPRSLYDSLGKN 114
            F R    + PL E+HEL+W+DGVAAET LDFDAPH+S+WEGLAWW GG  FF     F  ++D   P  +  A  R   LP        LY  LG +
Sbjct:   48 FARTLVPEGPLHEEHELIWDDGVAAETTLDFDAPHISKWEGLAWWFGGFGFFFGVYTFATVTDAIVPSFQNKAAARGPTLPFGG-----LYTELGSH 139          
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: K8YRF0_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRF0_NANGC)

HSP 1 Score: 87.8 bits (216), Expect = 1.240e-19
Identity = 43/102 (42.16%), Postives = 54/102 (52.94%), Query Frame = 0
Query:    4 SVARKMARGGGG------PPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPE 99
            S  R   R GGG      PPM  F+R    + PL E+HEL+W+D VAAE C+DFDA  +   E   WW GG  FF   LG   L+DP S    V +   +P+
Sbjct:   25 SFTRSAVRAGGGAGHNPGPPMQPFKRTAMPEGPLYEEHELIWDDRVAAEMCIDFDASFVPTREAFRWWLGGFGFFFGLLGLVALTDPASVNPCVNKAETMPD 126          
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: A0A3F2RRW9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRW9_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.690e-19
Identity = 47/117 (40.17%), Postives = 69/117 (58.97%), Query Frame = 0
Query:    1 MSTSVARKMARGGGG----PPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFDPRSLYDSLGK 113
            +ST+V R+     GG    PP P F R      PL E+ ELVWNDGVA ET +DFDAPH+ +++ +  W  GL   A+ +GF  L +P+S R A +R N+LP+  ++   + +  G+
Sbjct:   14 LSTNVRRQALATRGGHAHRPPPPPFARIAQPAQPLHEESELVWNDGVAPETLIDFDAPHIPKYQAVRHWLVGLGGLATLMGFVTLYNPDSLRQASKRGNHLPDLKWELGEVDEPEGE 130          
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: A0A7S2XQC7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQC7_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.800e-19
Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 0
Query:    3 TSVARKMARGGGGPPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNL 97
            T  + K   GG  PP+P F++       LVE+H+ VW+DGVA E  LDFD  H+S  EGLAWW GG  FF     F   ++PE K  AV R  N+
Sbjct:   54 TYSSSKALSGGHSPPLPPFRQLPTPSEKLVENHDCVWDDGVAPELALDFDCQHVSSTEGLAWWLGGFGFFIGVYQFIKYTNPEGKNPAVNRNMNM 148          
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: M4B8H2_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8H2_HYAAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.740e-18
Identity = 48/117 (41.03%), Postives = 67/117 (57.26%), Query Frame = 0
Query:    1 MSTSVARKMARGGGG----PPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFDPRSLYDSLGK 113
            MS +V R +    GG    PP P F R K    PL E+ ELVWNDGV+ ET +DFDAPH+ +++ L  W  GL FF + +G   L  P+S R AV+R   LP+  ++   + +  G+
Sbjct:    1 MSVNVRRGVLAVRGGHAHRPPPPPFARLKAPAQPLHEEAELVWNDGVSPETLIDFDAPHIPKYQALRHWLCGLGFFVTLMGVVTLYGPDSWRQAVKRETCLPDLKWELGEIDEPEGE 117          
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: D0P109_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P109_PHYIT)

HSP 1 Score: 84.0 bits (206), Expect = 2.700e-18
Identity = 46/107 (42.99%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    1 MSTSVARKMARGGGG----PPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFD 103
            +S +V R+     G     PP P F R K    PL E+ ELVWNDGVA ET +DFDAPH+ +++ L  W  GL  FA+ +G   L +P+S R A +R N+LP   ++
Sbjct:   14 LSVNVRRQALATRGNHAHRPPPPPFARIKTPAQPLHEEAELVWNDGVAPETLIDFDAPHIPKYQALRQWLYGLGGFATLMGVVTLYNPDSWRQASKRGNHLPNLKWE 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGL6_ECTSI6.710e-4661.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZFI9_9STRA1.800e-2249.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2P129_9STRA3.610e-2251.06Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
G4ZU03_PHYSP2.970e-2041.03Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
A0A7S2C717_9STRA6.710e-2047.42Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
K8YRF0_NANGC1.240e-1942.16Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A3F2RRW9_9STRA1.690e-1940.17Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A7S2XQC7_9STRA1.800e-1945.26Hypothetical protein n=1 Tax=Attheya septentrional... [more]
M4B8H2_HYAAE1.740e-1841.03Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
D0P109_PHYIT2.700e-1842.99Uncharacterized protein n=2 Tax=Phytophthora infes... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038863Putative NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialPANTHERPTHR36401FAMILY NOT NAMEDcoord: 10..100
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..81
NoneNo IPR availableTMHMMTMhelixcoord: 62..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4553contigH-paniculata_contig4553:9041..10937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4553.11425.1mRNA_H-paniculata_contig4553.11425.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4553 9041..11929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4553.11425.1 ID=prot_H-paniculata_contig4553.11425.1|Name=mRNA_H-paniculata_contig4553.11425.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MSTSVARKMARGGGGPPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLD
FDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPET
AFDPRSLYDSLGKNAAEGGADDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038863Put_Complex_I_su8