mRNA_H-paniculata_contig4553.11425.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: D8LGL6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGL6_ECTSI) HSP 1 Score: 153 bits (386), Expect = 2.020e-41 Identity = 69/108 (63.89%), Postives = 82/108 (75.93%), Query Frame = 1
Query: 1 MSTSVARKMARGGGGPPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFDPRSLY 324
M+++ AR++ARGGGGPP P F RNKP+D+ L E+HEL+W+DGVA ET +DFDAPH+S E AWW GGL FFA LG LSDPESKR AV R LP TAFDPR L+
Sbjct: 1 MTSTAARQVARGGGGPPQPPFARNKPVDYQLDENHELIWDDGVAPETTIDFDAPHMSMSEAFAWWGGGLTFFAGMLGLVTLSDPESKREAVPRAATLPATAFDPRDLF 108
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: A0A835ZFI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI9_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.360e-19 Identity = 45/91 (49.45%), Postives = 55/91 (60.44%), Query Frame = 1
Query: 52 MPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFDPRSLY 324
MP R L E+ EL+W+D VA E CLDFDAPH+SR +GL WW GGL FFA+ LS PE +R A+ R +P AFDP L+
Sbjct: 31 MPPMARQPRPTQRLHEEQELMWDDSVAPELCLDFDAPHISRTQGLLWWLGGLGFFAAVFNIVKLSYPEGRREALPRTATMPPAAFDPVDLF 121
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: A0A7S2P129_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P129_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.570e-19 Identity = 48/94 (51.06%), Postives = 57/94 (60.64%), Query Frame = 1
Query: 1 MSTSVARKMARG-GGGPPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQR 279
++ ++A + AR G PP P F RN LVEDHELVW+DGVA E +DFD+ H+S EGLAWW GGL FF F D ESK AV R
Sbjct: 16 INKALAAQQARSLGSSPPTPPFARNLAPTTKLVEDHELVWDDGVAPELTIDFDSQHISTGEGLAWWLGGLGFFTGLFQFCKTIDMESKNPAVNR 109
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: G4ZU03_PHYSP (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=G4ZU03_PHYSP) HSP 1 Score: 88.6 bits (218), Expect = 1.980e-17 Identity = 47/107 (43.93%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 1 MSTSVARKMARGGGG----PPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFD 309
+S +V R+ GG PP P F R K PL E+ ELVWNDGVA ET +DFDAPH+ +++ L W GL FA+ +G L +P+S R A +R N+LP+ ++
Sbjct: 14 LSVNVRRQALATRGGHAHRPPPPPFARIKEAAAPLHEEAELVWNDGVAPETLIDFDAPHIPKYQALRHWLYGLGAFATLMGVVTLYNPDSWRQASKRGNHLPDLKWE 120
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: K8YRF0_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRF0_NANGC) HSP 1 Score: 87.8 bits (216), Expect = 5.520e-17 Identity = 43/102 (42.16%), Postives = 54/102 (52.94%), Query Frame = 1
Query: 10 SVARKMARGGGG------PPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPE 297
S R R GGG PPM F+R + PL E+HEL+W+D VAAE C+DFDA + E WW GG FF LG L+DP S V + +P+
Sbjct: 25 SFTRSAVRAGGGAGHNPGPPMQPFKRTAMPEGPLYEEHELIWDDRVAAEMCIDFDASFVPTREAFRWWLGGFGFFFGLLGLVALTDPASVNPCVNKAETMPD 126
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: A0A7S2C717_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C717_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 6.200e-17 Identity = 46/95 (48.42%), Postives = 55/95 (57.89%), Query Frame = 1
Query: 61 FQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSD---PESKRLAVQRINNLPETAFDPRSLYDSLG 336
F R + PL E+HEL+W+DGVAAET LDFDAPH+S+WEGLAWW GG FF F ++D P + A R LP LY LG
Sbjct: 48 FARTLVPEGPLHEEHELIWDDGVAAETTLDFDAPHISKWEGLAWWFGGFGFFFGVYTFATVTDAIVPSFQNKAAARGPTLPFGG-----LYTELG 137
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: A0A7S2XQC7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQC7_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 8.080e-17 Identity = 43/95 (45.26%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 7 TSVARKMARGGGGPPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNL 291
T + K GG PP+P F++ LVE+H+ VW+DGVA E LDFD H+S EGLAWW GG FF F ++PE K AV R N+
Sbjct: 54 TYSSSKALSGGHSPPLPPFRQLPTPSEKLVENHDCVWDDGVAPELALDFDCQHVSSTEGLAWWLGGFGFFIGVYQFIKYTNPEGKNPAVNRNMNM 148
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: A0A3F2RRW9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRW9_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 9.610e-17 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 1 MSTSVARKMARGGGG----PPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFD 309
+ST+V R+ GG PP P F R PL E+ ELVWNDGVA ET +DFDAPH+ +++ + W GL A+ +GF L +P+S R A +R N+LP+ ++
Sbjct: 14 LSTNVRRQALATRGGHAHRPPPPPFARIAQPAQPLHEESELVWNDGVAPETLIDFDAPHIPKYQAVRHWLVGLGGLATLMGFVTLYNPDSLRQASKRGNHLPDLKWE 120
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: D0P109_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P109_PHYIT) HSP 1 Score: 84.0 bits (206), Expect = 8.740e-16 Identity = 46/107 (42.99%), Postives = 63/107 (58.88%), Query Frame = 1
Query: 1 MSTSVARKMARGGGG----PPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFD 309
+S +V R+ G PP P F R K PL E+ ELVWNDGVA ET +DFDAPH+ +++ L W GL FA+ +G L +P+S R A +R N+LP ++
Sbjct: 14 LSVNVRRQALATRGNHAHRPPPPPFARIKTPAQPLHEEAELVWNDGVAPETLIDFDAPHIPKYQALRQWLYGLGGFATLMGVVTLYNPDSWRQASKRGNHLPNLKWE 120
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Match: M4B8H2_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8H2_HYAAE) HSP 1 Score: 86.7 bits (213), Expect = 1.060e-15 Identity = 48/117 (41.03%), Postives = 67/117 (57.26%), Query Frame = 1
Query: 1 MSTSVARKMARGGGG----PPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDFDAPHLSRWEGLAWWAGGLAFFASFLGFNYLSDPESKRLAVQRINNLPETAFDPRSLYDSLGK 339
MS +V R + GG PP P F R K PL E+ ELVWNDGV+ ET +DFDAPH+ +++ L W GL FF + +G L P+S R AV+R LP+ ++ + + G+
Sbjct: 1 MSVNVRRGVLAVRGGHAHRPPPPPFARLKAPAQPLHEEAELVWNDGVSPETLIDFDAPHIPKYQALRHWLCGLGFFVTLMGVVTLYGPDSWRQAVKRETCLPDLKWELGEIDEPEGE 117 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4553.11425.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4553.11425.1 >prot_H-paniculata_contig4553.11425.1 ID=prot_H-paniculata_contig4553.11425.1|Name=mRNA_H-paniculata_contig4553.11425.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp MSTSVARKMARGGGGPPMPIFQRNKPIDFPLVEDHELVWNDGVAAETCLDback to top mRNA from alignment at H-paniculata_contig4553:9041..11929+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4553.11425.1 ID=mRNA_H-paniculata_contig4553.11425.1|Name=mRNA_H-paniculata_contig4553.11425.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2889bp|location=Sequence derived from alignment at H-paniculata_contig4553:9041..11929+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4553:9041..11929+ >mRNA_H-paniculata_contig4553.11425.1 ID=mRNA_H-paniculata_contig4553.11425.1|Name=mRNA_H-paniculata_contig4553.11425.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at H-paniculata_contig4553:9041..11929+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |