prot_H-paniculata_contig4549.11417.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4549.11417.1
Unique Nameprot_H-paniculata_contig4549.11417.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length210
Homology
BLAST of mRNA_H-paniculata_contig4549.11417.1 vs. uniprot
Match: D8LCH9_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH9_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 4.450e-8
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 MVDVRNEKCSLRGCSTRASYGVAGTKKAEFCARHAEDGMV 40
            M+ VR + C   GC+TRA++GV G+KKAEFC+RHAEDGMV
Sbjct:    1 MIHVRAKTCDHVGCTTRANFGVPGSKKAEFCSRHAEDGMV 40          
BLAST of mRNA_H-paniculata_contig4549.11417.1 vs. uniprot
Match: D8LMB1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB1_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 4.950e-5
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 0
Query:    1 MVDVRNEKCSLRGCSTRASYGVAGTKKAEFCARHAEDGM 39
            MVDV N +C   GC+ R S+G  G+KK EFCA+HA  GM
Sbjct:    1 MVDVVNRRCRHPGCTKRPSFGQDGSKKQEFCAQHAHQGM 39          
BLAST of mRNA_H-paniculata_contig4549.11417.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 7.000e-5
Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 0
Query:    1 MVDVRN-EKCSLRGCSTRASYGVAGTKKAEFCARHAEDGMV 40
            MVD+ N  +C+   C    +YGV GT+KAEFCA HA DGMV
Sbjct:    8 MVDIHNIRRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGMV 48          
BLAST of mRNA_H-paniculata_contig4549.11417.1 vs. uniprot
Match: D7G4X8_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X8_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 7.580e-5
Identity = 22/35 (62.86%), Postives = 30/35 (85.71%), Query Frame = 0
Query:    6 NEKCSLRGCSTRASYGVAGTKKAEFCARHAEDGMV 40
            +++CS+ GCSTRA YGVAG+KK EF ++HA +GMV
Sbjct:   83 SQECSIDGCSTRAHYGVAGSKKREFXSKHALEGMV 117          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4549.11417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LCH9_ECTSI4.450e-865.00EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LMB1_ECTSI4.950e-556.41EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5LBM3_9PHAE7.000e-556.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4X8_ECTSI7.580e-562.86EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4549contigH-paniculata_contig4549:10447..11303 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4549.11417.1mRNA_H-paniculata_contig4549.11417.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4549 10447..11602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4549.11417.1 ID=prot_H-paniculata_contig4549.11417.1|Name=mRNA_H-paniculata_contig4549.11417.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=210bp
MVDVRNEKCSLRGCSTRASYGVAGTKKAEFCARHAEDGMVNVLNKKCSHR
GCSTYALYGMAGTKTAEVLCTACRRRDGGRAEQEMLSPGLLYTCVVRGGG
DEKSRVLCATCQRRDGERAEQEMLPPGLLYRCVVRDGGHENGRVLCTACR
RRDGGRAEQEMLPPGLLYTSVVRGGGHEKSRVLCSACQRWDGERAEQEML
PPGLLYPCVV
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