prot_H-paniculata_contig4538.11399.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4538.11399.1
Unique Nameprot_H-paniculata_contig4538.11399.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length344
Homology
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BLAST of mRNA_H-paniculata_contig4538.11399.1 vs. uniprot
Match: D8LPR4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPR4_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 1.650e-21
Identity = 54/94 (57.45%), Postives = 69/94 (73.40%), Query Frame = 0 
Query:    1 MEKPIQLCSACYAVCYALERERIERTRKVIEEEATAAKALKKRKNYKPIGWKSRVQHELEESLGADRRIVSHIMENMQASAI----AAIPGGSR 90
            MEKP+QLCS CY VC  +ER+RIE TR+ ++ E  AAKA K R+N KP GWKSRVQHELEESL ADR +VS ++++ +A+A     AA P G +
Sbjct:  291 MEKPVQLCSVCYMVCSTIERDRIETTRRAMDAEEEAAKAGKARRNRKPPGWKSRVQHELEESLSADRHVVSRLIDSFEAAAAIAMAAAAPNGEK 384
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4538.11399.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPR4_ECTSI1.650e-2157.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 20..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4538contigH-paniculata_contig4538:11260..14161 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4538.11399.1mRNA_H-paniculata_contig4538.11399.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4538 10953..15395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4538.11399.1 ID=prot_H-paniculata_contig4538.11399.1|Name=mRNA_H-paniculata_contig4538.11399.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=344bp
MEKPIQLCSACYAVCYALERERIERTRKVIEEEATAAKALKKRKNYKPIG
WKSRVQHELEESLGADRRIVSHIMENMQASAIAAIPGGSRGGGDGTPCLT
GRKLPPRLSSSLTTPSSTVKTPTGYSCRTKSEQMLPLGYQDKTFFGVSGG
DDDDEGDHRGTELLISVGQDERTGGVLTSGLGIEEGVERKYSRGKRRQSS
KEEERNIGASSSNSKSRRGGDRNSSSNNNGRNKHDIRARRKAKERARRKQ
KISKGFIDDNDTKSAVDRNTNNTDNSDPPPGPITPLALSAPIITSEDGKP
GGCRYRVADDICGSAQNHDVLLLPVRPSPSTGLVVDVEGSKDN*
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