prot_H-paniculata_contig4493.11309.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4493.11309.1
Unique Nameprot_H-paniculata_contig4493.11309.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
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BLAST of mRNA_H-paniculata_contig4493.11309.1 vs. uniprot
Match: UPI001BB2134C (uncharacterized protein LOC121427317 n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB2134C)

HSP 1 Score: 50.4 bits (119), Expect = 3.710e-5
Identity = 27/63 (42.86%), Postives = 37/63 (58.73%), Query Frame = 0 
Query:   24 IEAADNSGTRPLMFACRGSHSQVADILLEAGADPRST-TSEGSTPLHFAAFAGSLLVRESMSE 85
            +   ++SG  PLM AC+     +A+ILLEAGADP  T T  GST LH+A      L+++   E
Sbjct:  643 VNRCNHSGQTPLMIACKYRQKDIANILLEAGADPNLTCTVNGSTALHYACEENGNLIKQCREE 705
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BLAST of mRNA_H-paniculata_contig4493.11309.1 vs. uniprot
Match: Q0J744_ORYSJ (Os08g0233400 protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q0J744_ORYSJ)

HSP 1 Score: 48.5 bits (114), Expect = 7.710e-5
Identity = 25/57 (43.86%), Postives = 33/57 (57.89%), Query Frame = 0 
Query:   21 RNQIEAADNSGTRPLMFACRGSHSQVADILLEAGADPRSTTSEGSTPLHFAAFAGSL 77
            R  + AAD+ G  PL+FA  G ++ +   LL+ GADP     +G TPLH AA  G L
Sbjct:   87 RVDVNAADDEGRTPLVFAVIGENAAIVKYLLDHGADPDKADDDGLTPLHSAAGIGPL 143
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BLAST of mRNA_H-paniculata_contig4493.11309.1 vs. uniprot
Match: A0A2P4XBX3_9STRA (Ankyrin repeat-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XBX3_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 8.740e-5
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 0 
Query:   29 NSGTRPLMFACRGSHSQVADILLEAGADPRSTTSEGSTPLHFAAFAG 75
            +S T  L+ AC   HS V ++LL+AGADP+   ++G+TPLHF +  G
Sbjct:  197 DSTTTALLLACMAGHSNVVELLLDAGADPQVEDADGNTPLHFTSRDG 243
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4493.11309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI001BB2134C3.710e-542.86uncharacterized protein LOC121427317 n=1 Tax=Lytec... [more]
Q0J744_ORYSJ7.710e-543.86Os08g0233400 protein n=1 Tax=Oryza sativa subsp. j... [more]
A0A2P4XBX3_9STRA8.740e-546.81Ankyrin repeat-containing protein n=1 Tax=Phytopht... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 14..89
e-value: 1.5E-15
score: 59.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 23..79
NoneNo IPR availablePFAMPF13857Ank_5coord: 26..71
e-value: 5.1E-10
score: 39.4
NoneNo IPR availablePANTHERPTHR24178FAMILY NOT NAMEDcoord: 27..79
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 30..62
score: 10.419
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 23..89
score: 16.839

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4493contigH-paniculata_contig4493:1031..1297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4493.11309.1mRNA_H-paniculata_contig4493.11309.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4493 1031..1297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4493.11309.1 ID=prot_H-paniculata_contig4493.11309.1|Name=mRNA_H-paniculata_contig4493.11309.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
FFLFFGLFPPILHSVVYFLPRNQIEAADNSGTRPLMFACRGSHSQVADIL
LEAGADPRSTTSEGSTPLHFAAFAGSLLVRESMSENPAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom