prot_H-paniculata_contig42358.10828.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig42358.10828.1
Unique Nameprot_H-paniculata_contig42358.10828.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
BLAST of mRNA_H-paniculata_contig42358.10828.1 vs. uniprot
Match: A0A6H5L981_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L981_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 7.810e-22
Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 0
Query:    4 QDLDAGVIVGVGEGRTYGKGLVQNIAELPYNNALKYTVAKYYTPSGR 50
            QDLDAGVIVGVG GRTYGKGLVQN+AELPYNNALKYTVAKYYTPSGR
Sbjct:  620 QDLDAGVIVGVGNGRTYGKGLVQNVAELPYNNALKYTVAKYYTPSGR 666          
BLAST of mRNA_H-paniculata_contig42358.10828.1 vs. uniprot
Match: A0A835Z050_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z050_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.670e-17
Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 0
Query:    4 QDLDAGVIVGVGEGRTYGKGLVQNIAELPYNNALKYTVAKYYTPSGR 50
            QD D+GVIVGVG+GRT+GKGLVQN+  LPY++ALKYTVAKYYTPSGR
Sbjct:  427 QDTDSGVIVGVGKGRTFGKGLVQNVRPLPYDSALKYTVAKYYTPSGR 473          
BLAST of mRNA_H-paniculata_contig42358.10828.1 vs. uniprot
Match: K0R2J9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R2J9_THAOC)

HSP 1 Score: 76.6 bits (187), Expect = 4.580e-15
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    4 QDLDAGVIVGVGEGRTYGKGLVQNIAELPYNNALKYTVAKYYTPSGR 50
            QDLD GV+VG  +GRT+GKGLVQN+ +LPY  ALKYTVAKYYTPSGR
Sbjct:  516 QDLDVGVVVG--KGRTFGKGLVQNVQDLPYQTALKYTVAKYYTPSGR 560          
BLAST of mRNA_H-paniculata_contig42358.10828.1 vs. uniprot
Match: B5YMX9_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMX9_THAPS)

HSP 1 Score: 76.6 bits (187), Expect = 4.580e-15
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    4 QDLDAGVIVGVGEGRTYGKGLVQNIAELPYNNALKYTVAKYYTPSGR 50
            QDLD GV+VG  +GRT+GKGLVQN+ +LPY  ALKYTVAKYYTPSGR
Sbjct:  667 QDLDVGVVVG--KGRTFGKGLVQNVQDLPYQTALKYTVAKYYTPSGR 711          
BLAST of mRNA_H-paniculata_contig42358.10828.1 vs. uniprot
Match: A0A7S2AM26_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AM26_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 8.410e-15
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 0
Query:    4 QDLDAGVIVGVGEGRTYGKGLVQNIAELPYNNALKYTVAKYYTPSGR 50
            QDLDAGVI+G    +T+GKGLVQN++ LPYN ALKYTVAKYYTPSGR
Sbjct:  193 QDLDAGVIIGAD--KTFGKGLVQNVSPLPYNTALKYTVAKYYTPSGR 237          
BLAST of mRNA_H-paniculata_contig42358.10828.1 vs. uniprot
Match: A0A7S1YXK9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YXK9_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 8.540e-15
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    4 QDLDAGVIVGVGEGRTYGKGLVQNIAELPYNNALKYTVAKYYTPSGR 50
            QDLD GVIVG    RT+GKGLVQN+ +LPYN ALKYTVAKYYTPSGR
Sbjct:  574 QDLDVGVIVG--NERTFGKGLVQNVEDLPYNTALKYTVAKYYTPSGR 618          
BLAST of mRNA_H-paniculata_contig42358.10828.1 vs. uniprot
Match: A0A7S2U989_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U989_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.360e-14
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    4 QDLDAGVIVGVGEGRTYGKGLVQNIAELPYNNALKYTVAKYYTPSGR 50
            QDLD G+IVG    RT+GKGLVQN+  LP+N ALK+TVAKYYTPSGR
Sbjct:   67 QDLDVGLIVG--SDRTFGKGLVQNVETLPFNTALKFTVAKYYTPSGR 111          
BLAST of mRNA_H-paniculata_contig42358.10828.1 vs. uniprot
Match: A0A7S2KGE2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KGE2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.510e-14
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    4 QDLDAGVIVGVGEGRTYGKGLVQNIAELPYNNALKYTVAKYYTPSGR 50
            QDLD GVIVG    R+YGKGLVQN+ ELPY+ ALKYTVAKYYTPSGR
Sbjct:  159 QDLDLGVIVG--SDRSYGKGLVQNVQELPYSTALKYTVAKYYTPSGR 203          
BLAST of mRNA_H-paniculata_contig42358.10828.1 vs. uniprot
Match: I2CP28_NANGC (Carboxyl-terminal protease (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP28_NANGC)

HSP 1 Score: 75.1 bits (183), Expect = 1.580e-14
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    4 QDLDAGVIVGVGEGRTYGKGLVQNIAELPYNNALKYTVAKYYTPSGR 50
            QDLD+GVIVG  E RTYGKGLVQN+  LP+  ALKYTVAKYYTPSGR
Sbjct:  224 QDLDSGVIVG--EDRTYGKGLVQNVEPLPFKTALKYTVAKYYTPSGR 268          
BLAST of mRNA_H-paniculata_contig42358.10828.1 vs. uniprot
Match: A0A7S2KGF4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KGF4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.590e-14
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    4 QDLDAGVIVGVGEGRTYGKGLVQNIAELPYNNALKYTVAKYYTPSGR 50
            QDLD GVIVG    R+YGKGLVQN+ ELPY+ ALKYTVAKYYTPSGR
Sbjct:  529 QDLDLGVIVG--SDRSYGKGLVQNVQELPYSTALKYTVAKYYTPSGR 573          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig42358.10828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L981_9PHAE7.810e-2295.74PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z050_9STRA1.670e-1780.85ClpP/crotonase-like domain-containing protein n=1 ... [more]
K0R2J9_THAOC4.580e-1576.60Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
B5YMX9_THAPS4.580e-1576.60Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S2AM26_9STRA8.410e-1576.60Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1YXK9_9STRA8.540e-1578.72Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
A0A7S2U989_9STRA1.360e-1472.34Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2KGE2_9STRA1.510e-1478.72Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
I2CP28_NANGC1.580e-1478.72Carboxyl-terminal protease (Fragment) n=1 Tax=Nann... [more]
A0A7S2KGF4_9STRA1.590e-1478.72Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.226.10coord: 4..50
e-value: 3.0E-10
score: 41.9
NoneNo IPR availableGENE3D3.30.750.44coord: 25..39
e-value: 3.0E-10
score: 41.9
NoneNo IPR availablePANTHERPTHR32060FAMILY NOT NAMEDcoord: 4..50
IPR005151Tail specific proteasePFAMPF03572Peptidase_S41coord: 4..50
e-value: 4.4E-9
score: 36.1
IPR019774Aromatic amino acid hydroxylase, C-terminalPROSITEPS51410BH4_AAA_HYDROXYL_2coord: 1..50
score: 9.381
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 4..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig42358contigH-paniculata_contig42358:1023..1175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig42358.10828.1mRNA_H-paniculata_contig42358.10828.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig42358 1023..1175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig42358.10828.1 ID=prot_H-paniculata_contig42358.10828.1|Name=mRNA_H-paniculata_contig42358.10828.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
MDWQDLDAGVIVGVGEGRTYGKGLVQNIAELPYNNALKYTVAKYYTPSGR
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005151Tail-specific_protease
IPR019774Aromatic-AA_hydroxylase_C
IPR029045ClpP/crotonase-like_dom_sf