prot_H-paniculata_contig4215.10802.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4215.10802.1
Unique Nameprot_H-paniculata_contig4215.10802.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length393
Homology
BLAST of mRNA_H-paniculata_contig4215.10802.1 vs. uniprot
Match: A0A6H5KS36_9PHAE (Protein MCM10 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS36_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 1.650e-95
Identity = 203/391 (51.92%), Postives = 249/391 (63.68%), Query Frame = 0
Query:   29 MADIDAADIDLLDFFSNDDDQSSTSAPPAITQHITQQSMNRQSPGPTAQPTFAPQRINGGDSDASLSSSAARPFNTANSXXXXXXXXXXXNISKAGPTAAVADFTETYSGLRVRNRLLSAEDMRVRMKGRKVHRLDALKVAPLRVLESEDTFDAWATLGVLVSKSPRRQAANGGSYSIWTLSDLSRKENDLSLFVFQEALGSHWTMCLGTLVAVVGAKVLPPKAGDVGDKG-KLALSVDTPWQIHKVGMAMDYAICKGTRKDGKPCTMPVNKTEGG-HCEFHVVAAFNRSQRQSQEKSRNKSQDGKTNSKGQTLRSLLMGNATEGRKV-----------------SSIASRNL----------PTARTPAPILAGILGAGKRRDDFGGSTR 390
            M D+D  D+DLLD FS +   SS++  P  ++   QQ    QS GP+A P                             XXXXXXXXXXX  +        ADFTE +SGLRVRNRLLSAEDMRVRM+GRKVHRLD+L+  P R LES+D  DAWA +GVLVSKSPRRQAANGGS+S+WTLSDLSR+EN++SLF+FQEALGSHWT+C GTL+AVVGAKVLP K GD G+   +LA SVD+PWQ++++GM+MDY +CKG RKDGKPCTMPVNKTEGG  CEFHVVAAFNR+QR++   ++         +KG T +  L  +A  G  V                 + + SR+           P    PAP L+ ILGAG RR +  G+TR
Sbjct:    1 MRDMDDEDMDLLDLFSGETRPSSSNCHPRESKRTEQQ--KPQSRGPSASPXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXAPKXXXXPPADFTEAFSGLRVRNRLLSAEDMRVRMRGRKVHRLDSLRTVPPRALESQDPADAWAAVGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGDGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQRKAPVGNK---------TKGNTQQPALSMSAKLGASVRQQXXXXXXXXRPFQSRAGLPSRSTMPGQRAQQGPPPRAAPAPTLSSILGAGARRREGVGATR 373          
BLAST of mRNA_H-paniculata_contig4215.10802.1 vs. uniprot
Match: D8LM23_ECTSI (Protein MCM10 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM23_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 5.910e-82
Identity = 128/170 (75.29%), Postives = 150/170 (88.24%), Query Frame = 0
Query:  151 MRVRMKGRKVHRLDALKVAPLRVLESEDTFDAWATLGVLVSKSPRRQAANGGSYSIWTLSDLSRKENDLSLFVFQEALGSHWTMCLGTLVAVVGAKVLPPKAGDVGDKG-KLALSVDTPWQIHKVGMAMDYAICKGTRKDGKPCTMPVNKTEGG-HCEFHVVAAFNRSQR 318
            MRVRM+GRKVHRLDAL+  P R LES+D  DAWA +GVLVSKSPRRQAANGGS+S+WTLSDLSR+EN++SLF+FQEALGSHWT+C GTL+AVVGAKVLP K G  G+   +LA SVD+PWQ++++GM+MDY +CKG RKDGKPCTMPVNKTEGG  CEFHVVAAFNR+QR
Sbjct:    1 MRVRMRGRKVHRLDALRAVPPRALESQDPADAWAAVGVLVSKSPRRQAANGGSFSVWTLSDLSRRENEVSLFLFQEALGSHWTVCEGTLIAVVGAKVLPDKGGGGGNAPQRLAFSVDSPWQVNRIGMSMDYGLCKGKRKDGKPCTMPVNKTEGGGFCEFHVVAAFNRAQR 170          
BLAST of mRNA_H-paniculata_contig4215.10802.1 vs. uniprot
Match: UPI000D1CC1AD (protein MCM10 homolog n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CC1AD)

HSP 1 Score: 129 bits (323), Expect = 1.160e-29
Identity = 73/194 (37.63%), Postives = 113/194 (58.25%), Query Frame = 0
Query:  119 NISKAGPTAAVADFTETYSGLRVRNRLLSAEDMRVRMKGRKVHRLDALKVAPLRVLESEDTFDAWATLGVLVSKSPRRQAANGGSYSIWTLSDLSRKENDLSLFVFQEALGSHWTMCLGTLVAVVGAKVLPPKAGDVGDKGKLALSVDTPWQIHKVGMAMDYAICKGTRKDGKPCTMPVNKTEGGHCEFHVVAA 312
            ++   G   +  D  E +SGLR+RNR LS E +  ++   +  +L+ALK A +     +    +WAT+ VL  K   R ++N  +Y IW LS L+  E+ +SLF+F +A   HW   +G+++A+  AKV          KG  ++SV    Q+  VG ++D+AIC G RKDG PC++PVN+ EG +C+FH +AA
Sbjct:   82 SVQSFGSNGSTPDL-EVHSGLRIRNRCLSREMLTTKLMELRFVKLEALKHAVI----GDGVRGSWATIAVLSDKGQPRVSSNSKNYVIWKLSCLN--ESTVSLFLFGDAYKEHWKEAVGSVIAIFDAKVRHDDK-----KGDFSVSVADVNQLTVVGTSLDFAICNGKRKDGAPCSVPVNRKEGAYCKFHALAA 263          
BLAST of mRNA_H-paniculata_contig4215.10802.1 vs. uniprot
Match: A0A1X7VR66_AMPQE (Protein MCM10 homolog n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VR66_AMPQE)

HSP 1 Score: 130 bits (326), Expect = 3.480e-29
Identity = 68/181 (37.57%), Postives = 105/181 (58.01%), Query Frame = 0
Query:  133 TETYSGLRVRNRLLSAEDMRVRMKGRKVHRLDALKVAPLRVLESEDTFDAWATLGVLVSKSPRRQAANGGSYSIWTLSDLSRKENDLSLFVFQEALGSHWTMCLGTLVAVVGAKVLPPKAGDVGDKGKLALSVDTPWQIHKVGMAMDYAICKGTRKDGKPCTMPVNKTEGGHCEFHVVAAF 313
            TE ++GLR++N L+S+E M+ RM GRK+ R+   ++ P    E  D    W T GVLV+K P +    G  +S+W LSDLS + + +SLF+F +A   HW   +GT+VA++  K+   K  + G     +LS+D   ++  +G++ DY +C    K GK CT   NK  GG CE+H+   +
Sbjct:  126 TERFTGLRIKNPLVSSELMKERMSGRKMIRIP--QIYPNIKKEDFDIAGDWVTGGVLVNKLPPKNTTKGSKFSVWKLSDLSSQNDVVSLFLFDKAFDVHWKTPIGTVVAILNPKI-QNKQVNSGPGSNFSLSLDNNNKLMILGVSFDYTVCSANTKSGKKCTNFANKQYGGKCEYHLQGEY 303          
BLAST of mRNA_H-paniculata_contig4215.10802.1 vs. uniprot
Match: UPI00077F8528 (protein MCM10 homolog isoform X1 n=3 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI00077F8528)

HSP 1 Score: 128 bits (321), Expect = 1.500e-28
Identity = 65/195 (33.33%), Postives = 117/195 (60.00%), Query Frame = 0
Query:  120 ISKAGPTAAVADFTETYSGLRVRNRLLSAEDMRVRMKGRKVHRLDALKVAPLRVLESEDTFDAWATLGVLVSKSPRRQAANGGSYSIWTLSDLSRKENDLSLFVFQEALGSHWTMCLGTLVAVVGAKVLPPKAGDVGDK-GKLALSVDTPWQIHKVGMAMDYAICKGTRKDGKPCTMPVNKTEGGHCEFHVVAAF 313
            ++K    +A   +T++YSG+R+ + L+S + M+ RM+GR++ ++  +K      ++  D    W T+G+L+SK P + + +G ++SIW +SDL   E  +++F+F  A   HW M +GT++  +   ++P    D  DK G + LS+D   ++ ++G + D+  CKG RKDG  CT+PVN ++  +C FHV   +
Sbjct:  131 MNKNNSKSAEKCYTDSYSGIRIVDPLISFDMMQKRMEGRRLIKMSFIK----NFIKGGDIEGDWVTVGILISKLPPKTSKSGKNFSIWKMSDLHDCEKVVTMFLFGAAHAEHWKMTVGTVIGFLNPSLMP----DNKDKNGNMTLSIDHAGKLMQMGKSKDFGHCKGRRKDGTTCTVPVNVSQCEYCVFHVKREY 317          
BLAST of mRNA_H-paniculata_contig4215.10802.1 vs. uniprot
Match: A0A835YRW3_9STRA (Protein MCM10 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRW3_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.680e-28
Identity = 66/178 (37.08%), Postives = 102/178 (57.30%), Query Frame = 0
Query:  134 ETYSGLRVRNRLLSAE-DMRVRMKGRKVHRLDALKVAPLRVLESEDTFDAWATLGVLVSKSPRRQAANGGSYSIWTLSDLSRKENDLSLFVFQEALGSHWTMCLGTLVAVVGAKVLPPKA-GDVGDKGKLALSVDTPWQIHKVGMAMDYAICKGTRKDGKPCTMPVNKTEGGHCEFHV 309
            E  SG+RV    L  E  +    +G K  +LD L     + LES D   AWAT+GVLV KS +R  ++G  +  W LS L+    + +L + ++AL SHW++C G+++ ++GA  LP +     GD   L  + D  WQ+ ++GM+ DYA+C GT+ +G  CT+ VNK+   +C +H 
Sbjct:    2 ERLSGIRVNKPTLVDEPSLEALRQGYKFFKLDTLPSIARQALESTDPMHAWATVGVLVRKSQQRDTSSGKPFVKWGLSGLAAGSKESTLLLSKDALSSHWSICEGSVLMLLGAHALPKQEQSSAGDP--LVFAADASWQVVRIGMSSDYAVCGGTKANGARCTLAVNKSVSSYCSYHA 177          
BLAST of mRNA_H-paniculata_contig4215.10802.1 vs. uniprot
Match: A0A4W3J4D2_CALMI (Protein MCM10 homolog n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3J4D2_CALMI)

HSP 1 Score: 127 bits (319), Expect = 2.130e-28
Identity = 72/195 (36.92%), Postives = 111/195 (56.92%), Query Frame = 0
Query:  122 KAGPTAAVAD--FTETYSGLRVRNRLLSAEDMRVRMKGRKVHRLDALKVA-PLRVLESEDTFDAWATLGVLVSKSPRRQAANGGSYSIWTLSDLSRKENDLSLFVFQEALGSHWTMCLGTLVAVVGAKVLPPKAGDVGDKGKLALSVDTPWQIHKVGMAMDYAICKGTRKDGKPCTMPVNKTEGGHCEFHVVAAF 313
            + GP+  V      + +SGLR+RN L+S+ +M  +M+ RK+ RL  L+       LE+ D    W T GV+  K+  + ++NG ++SIW L+DL     +LSLF+F      HW    GT++ ++ A  + PK G      ++ LSVD P +I  +G AMD   C+  +K+G+PCT  VN  E G+CE+HV A +
Sbjct:   28 RPGPSGIVGQDIAVDRFSGLRIRNPLVSSTEMERKMQSRKMIRLSQLRSKLATENLEATD----WVTFGVVCKKTTPQSSSNGKTFSIWRLTDLCSSSLNLSLFLFGNVHKEHWKTETGTVIGLLNANPMKPKEGSE----EVCLSVDHPQKILVMGEAMDMGCCRARKKNGEPCTQIVNLRECGYCEYHVKAQY 214          
BLAST of mRNA_H-paniculata_contig4215.10802.1 vs. uniprot
Match: V9KEH6_CALMI (Protein MCM10 homolog (Fragment) n=3 Tax=Callorhinchus milii TaxID=7868 RepID=V9KEH6_CALMI)

HSP 1 Score: 127 bits (319), Expect = 3.180e-28
Identity = 72/195 (36.92%), Postives = 111/195 (56.92%), Query Frame = 0
Query:  122 KAGPTAAVAD--FTETYSGLRVRNRLLSAEDMRVRMKGRKVHRLDALKVA-PLRVLESEDTFDAWATLGVLVSKSPRRQAANGGSYSIWTLSDLSRKENDLSLFVFQEALGSHWTMCLGTLVAVVGAKVLPPKAGDVGDKGKLALSVDTPWQIHKVGMAMDYAICKGTRKDGKPCTMPVNKTEGGHCEFHVVAAF 313
            + GP+  V      + +SGLR+RN L+S+ +M  +M+ RK+ RL  L+       LE+ D    W T GV+  K+  + ++NG ++SIW L+DL     +LSLF+F      HW    GT++ ++ A  + PK G      ++ LSVD P +I  +G AMD   C+  +K+G+PCT  VN  E G+CE+HV A +
Sbjct:  214 RPGPSGIVGQDIAVDRFSGLRIRNPLVSSTEMERKMQSRKMIRLSQLRSKLATENLEATD----WVTFGVVCKKTTPQSSSNGKTFSIWRLTDLCSSSLNLSLFLFGNVHKEHWKTETGTVIGLLNANPMKPKEGSE----EVCLSVDHPQKILVMGEAMDMGCCRARKKNGEPCTQIVNLRECGYCEYHVKAQY 400          
BLAST of mRNA_H-paniculata_contig4215.10802.1 vs. uniprot
Match: A0A485LLY3_9STRA (Aste57867_23134 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLY3_9STRA)

HSP 1 Score: 125 bits (313), Expect = 8.260e-28
Identity = 71/194 (36.60%), Postives = 110/194 (56.70%), Query Frame = 0
Query:  121 SKAGPTAAVADFT-ETYSGLRVRNRLLSAEDMRVRMKGRKVHRLDALKVAPLRVLESEDTFDAWATLGVLVSKSPRRQAANGGSYSIWTLSDLSRKENDLSLFVFQEALGSHWTMCLGTLVAVVGAKVLPPKAGDVGDKGKLALSVDTPWQIHKVGMAMDYAICKGTRKDGKPCTMPVNKTEGGHCEFHVVAAF 313
            S  GP+   A  T E++S LR+++RL+SA++MR +M+GRK   L AL+  P+R LES+D    W T+ V+  K+  +  A    Y +WTLSDL      +S+F++  A   HW    G++VA++   V+P K     +KGK +L V   + + K+G A+D+  CK     G  C +P+N   G +C  H+ A F
Sbjct:  123 SGGGPSIPKAPSTIESFSSLRIKDRLVSADEMRDQMEGRKFIPLSALEKTPMRELESQDVD--WVTIAVVSKKTMGK--AEHSPYVVWTLSDLDNAM--ISVFLYGGAYDDHWKELEGSIVALINPMVMPAK-----EKGKFSLRVTLGFHVVKLGTALDFGFCKSLTHGGSRCKIPINMANGDYCVIHMAAKF 305          
BLAST of mRNA_H-paniculata_contig4215.10802.1 vs. uniprot
Match: A0A8J5A2W2_9CHEL (Protein MCM10 homolog n=2 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5A2W2_9CHEL)

HSP 1 Score: 124 bits (312), Expect = 2.340e-27
Identity = 58/180 (32.22%), Postives = 110/180 (61.11%), Query Frame = 0
Query:  134 ETYSGLRVRNRLLSAEDMRVRMKGRKVHRLDALKVAPLRVLESEDTFDAWATLGVLVSKSPRRQAANGGSYSIWTLSDLSRKENDLSLFVFQEALGSHWTMCLGTLVAVVGAKVLPPKAGDVGDKGKLALSVDTPWQIHKVGMAMDYAICKGTRKDGKPCTMPVNKTEGGHCEFHVVAAF 313
            ET+S +R+ NR++S+  ++ RMKGRK+ R+  ++      +   D    W T+GV+++KS  + + NG ++SIW LSDL+  +  +  F+F +    HW   +G+++ ++ A ++  K  D   K ++ ++VD   ++  +G++ D+ +CK  RKDG PC++ VNK    +C++HV +A+
Sbjct:  170 ETFSNIRILNRVVSSSTLKERMKGRKMIRISTIQSH----IHGGDVDGDWVTMGVIINKSETKTSKNGKNFSIWKLSDLNDCDTVIKFFLFGDVNKQHWKTTVGSVIGILNASIMDNK--DHVSK-EICITVDNSHKVMLIGVSKDFGLCKSKRKDGHPCSIVVNKNNCEYCQYHVKSAY 342          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4215.10802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KS36_9PHAE1.650e-9551.92Protein MCM10 homolog n=1 Tax=Ectocarpus sp. CCAP ... [more]
D8LM23_ECTSI5.910e-8275.29Protein MCM10 homolog n=1 Tax=Ectocarpus siliculos... [more]
UPI000D1CC1AD1.160e-2937.63protein MCM10 homolog n=3 Tax=Selaginella moellend... [more]
A0A1X7VR66_AMPQE3.480e-2937.57Protein MCM10 homolog n=1 Tax=Amphimedon queenslan... [more]
UPI00077F85281.500e-2833.33protein MCM10 homolog isoform X1 n=3 Tax=Parasteat... [more]
A0A835YRW3_9STRA1.680e-2837.08Protein MCM10 homolog n=1 Tax=Tribonema minus TaxI... [more]
A0A4W3J4D2_CALMI2.130e-2836.92Protein MCM10 homolog n=1 Tax=Callorhinchus milii ... [more]
V9KEH6_CALMI3.180e-2836.92Protein MCM10 homolog (Fragment) n=3 Tax=Callorhin... [more]
A0A485LLY3_9STRA8.260e-2836.60Aste57867_23134 protein n=1 Tax=Aphanomyces stella... [more]
A0A8J5A2W2_9CHEL2.340e-2732.22Protein MCM10 homolog n=2 Tax=Nymphon striatum Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015408Zinc finger, Mcm10/DnaG-typePFAMPF09329zf-primasecoord: 275..317
e-value: 1.7E-14
score: 53.3
NoneNo IPR availableGENE3D2.40.50.140coord: 125..309
e-value: 5.8E-49
score: 168.0
IPR040184Minichromosome maintenance protein 10PANTHERPTHR13454FAMILY NOT NAMEDcoord: 65..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4215contigH-paniculata_contig4215:13151..14928 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4215.10802.1mRNA_H-paniculata_contig4215.10802.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4215 13151..14929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4215.10802.1 ID=prot_H-paniculata_contig4215.10802.1|Name=mRNA_H-paniculata_contig4215.10802.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=393bp
GAPETRGTTIASRKYIPVEASSAFRNFTMADIDAADIDLLDFFSNDDDQS
STSAPPAITQHITQQSMNRQSPGPTAQPTFAPQRINGGDSDASLSSSAAR
PFNTANSNSNSNNRSSNSNISKAGPTAAVADFTETYSGLRVRNRLLSAED
MRVRMKGRKVHRLDALKVAPLRVLESEDTFDAWATLGVLVSKSPRRQAAN
GGSYSIWTLSDLSRKENDLSLFVFQEALGSHWTMCLGTLVAVVGAKVLPP
KAGDVGDKGKLALSVDTPWQIHKVGMAMDYAICKGTRKDGKPCTMPVNKT
EGGHCEFHVVAAFNRSQRQSQEKSRNKSQDGKTNSKGQTLRSLLMGNATE
GRKVSSIASRNLPTARTPAPILAGILGAGKRRDDFGGSTRFVT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015408Znf_Mcm10/DnaG
IPR040184Mcm10