prot_H-paniculata_contig4184.10744.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4184.10744.1
Unique Nameprot_H-paniculata_contig4184.10744.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length629
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4184.10744.1 vs. uniprot
Match: A0A6H5K5X6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X6_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 2.360e-68
Identity = 129/267 (48.31%), Postives = 174/267 (65.17%), Query Frame = 0 
Query:   75 AASKVKKVNAKSGKPATEGTEMTKLEKGASTMYWAYKAFQAAQLCCGDVTVIAELASELLDEGM-AETMSNPALVGDAVEAVFSLHGGVKKFRKSTTNFSDFSTELSNQFKLQASAAPCNSDNEDETXXXXXXXAMEQAGASMEQAEHVYRHFTEA--NASGDETVSLEEFVHFYEKEGVPRSSAEMMFFQADIDGKGKISFEEWTKMMVSRVGRDESNFNCAGHHGMTPYVVRVNGLGCDWCSKLIPAGSTAAGCRRCDCDACGEC 338
            A +K+  VN K  KP  + ++++K   G S  YW YKAFQA +LC GDVT + E+A+ELLD+G+ A  ++NP ++ +AV+AV S +GG++ FRK+  NF+ FS  LS Q          N+D + +T            G +M+ AEH+Y  FT+A  ++ G   +S+EE+V+F  +EG+PRS AE  FFQADIDG G+ISFEEWT MM+ RVGRDE +FNC GHHG+  YV   NG+ CD+C   I AG  A GCRRCDCDAC  C
Sbjct:   15 ATNKLTNVN-KLAKPTKDLSQLSKFRNGGSAAYWGYKAFQALRLCSGDVTTLVEIAAELLDQGLCAGLVANPGMIFEAVQAVVSAYGGIQSFRKNVKNFAQFSEALSKQL---------NADGKTQTN-----------GRAMDSAEHLYTMFTQACCDSDGSGGISVEEYVYFCGREGIPRSVAETTFFQADIDGNGQISFEEWTAMMIGRVGRDEDSFNCGGHHGLVQYVAVFNGMACDFCGAPIQAGFFAKGCRRCDCDACATC 260
[Close]
BLAST of mRNA_H-paniculata_contig4184.10744.1 vs. uniprot
Match: D7G0S5_ECTSI (Calcium dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S5_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 4.770e-56
Identity = 110/252 (43.65%), Postives = 151/252 (59.92%), Query Frame = 0 
Query:   88 KPATEGTEMTKLEKGASTMYWAYKAFQAAQLCCGDVTVIAELASELLDEGM-AETMSNPALVGDAVEAVFSLHGGVKKFRKSTTNFSDFSTELSNQFKLQASAAPCNSDNEDETXXXXXXXAMEQAGASMEQAEHVYRHFTEANASGDETVSLEEFVHFYEKEGVPRSSAEMMFFQADIDGKGKISFEEWTKMMVSRVGRDESNFNCAGHHGMTPYVVRVNGLGCDWCSKLIPAGSTAAGCRRCDCDACGEC 338
            +P  + ++++K   G S  YW YKAFQA +LC GDVT +AE+A+ELLD+G+ A  ++NP ++ +AVEAV S +GG++ FRK+  NF+ FS  LS Q          N D + +T            G +M+ AEH+Y  FTE ++ G   +S+EE+V+F  +EGVPRS AE                  WT MM+ RVGRD+ +FNC G+HG+  YV   NG+ CD+C   I AG  A GCRRCDCDAC  C
Sbjct:   22 RPTKDLSQLSKFRNGGSAAYWGYKAFQALRLCSGDVTALAEIAAELLDQGLCAGLVANPGMILEAVEAVVSAYGGIQSFRKNVKNFAQFSAALSKQL---------NGDGKTQTN-----------GRTMDSAEHLYTMFTECDSDGSGGISIEEYVYFCSREGVPRSVAETTXXXXXXXXXXXXXXXXWTAMMMGRVGRDKDSFNCGGNHGLVQYVAVYNGMACDFCGTPIQAGFFAKGCRRCDCDACATC 253
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4184.10744.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5X6_9PHAE2.360e-6848.31EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0S5_ECTSI4.770e-5643.65Calcium dependent protein kinase n=1 Tax=Ectocarpu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 255..283
e-value: 0.049
score: 22.8
coord: 221..249
e-value: 57.0
score: 3.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 251..286
score: 10.524
NoneNo IPR availableGENE3D1.10.238.10coord: 146..285
e-value: 3.4E-13
score: 52.1
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 215..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4184contigH-paniculata_contig4184:4461..9977 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4184.10744.1mRNA_H-paniculata_contig4184.10744.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4184 4435..11459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4184.10744.1 ID=prot_H-paniculata_contig4184.10744.1|Name=mRNA_H-paniculata_contig4184.10744.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=629bp
MQPPPPPAYEEIATTPRENNMRKKQNTKAATTTADGREKGKSTVTGRKEK
SAKKATTTTVTDENMENEVPSKSGAASKVKKVNAKSGKPATEGTEMTKLE
KGASTMYWAYKAFQAAQLCCGDVTVIAELASELLDEGMAETMSNPALVGD
AVEAVFSLHGGVKKFRKSTTNFSDFSTELSNQFKLQASAAPCNSDNEDET
SAAAAAAAMEQAGASMEQAEHVYRHFTEANASGDETVSLEEFVHFYEKEG
VPRSSAEMMFFQADIDGKGKISFEEWTKMMVSRVGRDESNFNCAGHHGMT
PYVVRVNGLGCDWCSKLIPAGSTAAGCRRCDCDACGECLRANSPCPEEAG
GGLNCGGEHGLAFSAVPGSFSCDWCHTVVHGQPAVECRVCDCDGCMECAA
SSLQSYCASPRTCRGRHGLQRMKMSSPAYKCDCCSQPFIVGTSTFSCGIC
EVDVCVPCVWKDHQRALAIGRPFSCHGNHEMRAFHVMAYGDLSHRCDWCL
GDPRIGDRLHRCDMCNVDVCDICLMMVPTAPPTYEPPLPPPTYGGGSGIS
SDSSGPVLVAKPIEDTKYQIDSIVRVLGSGDNELDGKLMTVVGFESDLNS
DEDDIVVLQRRGMVVRAPSAHVYNVLDG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair