prot_H-paniculata_contig41099.10583.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig41099.10583.1
Unique Nameprot_H-paniculata_contig41099.10583.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length124
Homology
BLAST of mRNA_H-paniculata_contig41099.10583.1 vs. uniprot
Match: A0A8F0F7M8_9PHAE (Ribosomal protein S11 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7M8_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 2.290e-74
Identity = 114/123 (92.68%), Postives = 118/123 (95.93%), Query Frame = 0
Query:    1 MKKKNNLDIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQATLKARDEHKLNRVEVVVKGSGPGREPAIRAIHQKGVRIVSIKDETSIPYNGCRPPKRRRV 123
            MKKK  L IKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQA LKAR+EHKLNRVEVVVKGSGPGREPAIRA+HQKG+RIVSIKD+T IPYNGCRPPKRRRV
Sbjct:    1 MKKKTKLYIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQAALKAREEHKLNRVEVVVKGSGPGREPAIRAVHQKGIRIVSIKDDTFIPYNGCRPPKRRRV 123          
BLAST of mRNA_H-paniculata_contig41099.10583.1 vs. uniprot
Match: A0A1I9LVI2_9PHAE (30S ribosomal protein S11, chloroplastic n=36 Tax=Phaeophyceae TaxID=2870 RepID=A0A1I9LVI2_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 2.090e-61
Identity = 97/123 (78.86%), Postives = 109/123 (88.62%), Query Frame = 0
Query:    1 MKKKNNLDIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQATLKARDEHKLNRVEVVVKGSGPGREPAIRAIHQKGVRIVSIKDETSIPYNGCRPPKRRRV 123
            MKKK    I TG MH+HA+FNNTIVTI+DLNGNTLSWASSGTV FKGSRKGTPFAAQKAAE+A L A++ + L R+EVVVKGSGPGREPAIRA++QKG+R+VSIKD T IPYNGCRPPKRRRV
Sbjct:    1 MKKKIKRTIVTGTMHIHATFNNTIVTISDLNGNTLSWASSGTVNFKGSRKGTPFAAQKAAEKAALIAKESYGLKRLEVVVKGSGPGREPAIRAVYQKGIRVVSIKDVTFIPYNGCRPPKRRRV 123          
BLAST of mRNA_H-paniculata_contig41099.10583.1 vs. uniprot
Match: A0A141BSM1_9PHAE (30S ribosomal protein S11, chloroplastic n=17 Tax=Fucales TaxID=3009 RepID=A0A141BSM1_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 8.150e-59
Identity = 92/123 (74.80%), Postives = 108/123 (87.80%), Query Frame = 0
Query:    1 MKKKNNLDIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQATLKARDEHKLNRVEVVVKGSGPGREPAIRAIHQKGVRIVSIKDETSIPYNGCRPPKRRRV 123
            MKKK    I TG MHVHA+FNNTIVT++DL+GNTLSWAS+GTV FKGSRK TPFA+QKAAE+A L A+DE+ L R+E+ +KGSGPGRE AIRA++QKG++IVSIKD TSIPYNGCRPPKRRRV
Sbjct:    1 MKKKIKRTIVTGAMHVHATFNNTIVTVSDLDGNTLSWASAGTVNFKGSRKSTPFASQKAAEKAALVAKDEYGLKRLEISIKGSGPGREAAIRAVYQKGIKIVSIKDNTSIPYNGCRPPKRRRV 123          
BLAST of mRNA_H-paniculata_contig41099.10583.1 vs. uniprot
Match: A0A2I4Q2J0_9PHAE (30S ribosomal protein S11, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2J0_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 4.390e-57
Identity = 87/122 (71.31%), Postives = 107/122 (87.70%), Query Frame = 0
Query:    2 KKKNNLDIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQATLKARDEHKLNRVEVVVKGSGPGREPAIRAIHQKGVRIVSIKDETSIPYNGCRPPKRRRV 123
            KK  NL   TG MHVHA+FNNTIVTI+D NG+T+SWAS+GTV FKGSRKGTPFA+QKAAEQA LKA D++ + +V V++KGSGPGREP IRA+HQKG+R++SI+D T+IP+NGCRPPKRRR+
Sbjct:    6 KKPKNLKGFTGTMHVHATFNNTIVTISDANGDTISWASAGTVNFKGSRKGTPFASQKAAEQAILKAYDDYNVKKVNVILKGSGPGREPCIRAVHQKGIRVLSIEDITAIPHNGCRPPKRRRI 127          
BLAST of mRNA_H-paniculata_contig41099.10583.1 vs. uniprot
Match: A0A8E5XRL6_9PHAE (30S ribosomal protein S11, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRL6_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 7.460e-55
Identity = 87/123 (70.73%), Postives = 103/123 (83.74%), Query Frame = 0
Query:    1 MKKKNNLDIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQATLKARDEHKLNRVEVVVKGSGPGREPAIRAIHQKGVRIVSIKDETSIPYNGCRPPKRRRV 123
            MKKK    I TG +H+ A++NNTIVTI+DLNG T+SW+SSG  +F GSRKGTPFAAQKAAE+AT KA+D + L RV+VV+KG GPGREPA+RA+HQ G+RI SIKD T IPYNGCRPPKRRRV
Sbjct:    1 MKKKIKRTILTGKIHIQATYNNTIVTISDLNGKTISWSSSGNADFTGSRKGTPFAAQKAAEEATRKAKDLYGLKRVDVVIKGPGPGREPAVRAVHQNGIRINSIKDITGIPYNGCRPPKRRRV 123          
BLAST of mRNA_H-paniculata_contig41099.10583.1 vs. uniprot
Match: B7T1W4_VAULI (30S ribosomal protein S11, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1W4_VAULI)

HSP 1 Score: 154 bits (390), Expect = 2.760e-46
Identity = 79/122 (64.75%), Postives = 100/122 (81.97%), Query Frame = 0
Query:    2 KKKNNLDIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQATLKARDEHKLNRVEVVVKGSGPGREPAIRAIHQKGVRIVSIKDETSIPYNGCRPPKRRRV 123
            KKK   +I +GI+H+H++FNNTI+T+TDL GN+++WAS+GT  FKG+RKGT FAAQ AA++ATL+A D   L +V+V+VKG GPGRE AIRA+   GV+IVSIKD T IPYNGCRPP RRRV
Sbjct:    6 KKKIKRNIPSGIVHIHSTFNNTIITVTDLKGNSVAWASAGTAGFKGTRKGTSFAAQLAAKKATLQAIDSG-LKKVKVLVKGRGPGRETAIRALQTTGVKIVSIKDITPIPYNGCRPPNRRRV 126          
BLAST of mRNA_H-paniculata_contig41099.10583.1 vs. uniprot
Match: A0A8E5F964_9PHAE (Ribosomal protein S11 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E5F964_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 7.430e-46
Identity = 71/123 (57.72%), Postives = 101/123 (82.11%), Query Frame = 0
Query:    1 MKKKNNLDIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQATLKARDEHKLNRVEVVVKGSGPGREPAIRAIHQKGVRIVSIKDETSIPYNGCRPPKRRRV 123
            +++KN   ++ GIM++HASFNNTI+TITDL GNTLSWAS+GTV+FK ++KGT FA+QKA E+A L A+D + + ++++V+KGSGPGRE +IR+++ KG +I+SIKD T  P+NGCRPP  R +
Sbjct:    2 IRRKNRRIVQIGIMYIHASFNNTIITITDLKGNTLSWASAGTVDFKNAKKGTSFASQKAGEKAALIAKDLYGVKQLKIVIKGSGPGRESSIRSVYHKGFQILSIKDRTYSPFNGCRPPNHRSI 124          
BLAST of mRNA_H-paniculata_contig41099.10583.1 vs. uniprot
Match: A0A7U3NQU4_9STRA (30S ribosomal protein S11, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7U3NQU4_9STRA)

HSP 1 Score: 153 bits (387), Expect = 7.910e-46
Identity = 75/122 (61.48%), Postives = 99/122 (81.15%), Query Frame = 0
Query:    2 KKKNNLDIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQATLKARDEHKLNRVEVVVKGSGPGREPAIRAIHQKGVRIVSIKDETSIPYNGCRPPKRRRV 123
            KKK   ++ TG+ H+ ++FNN I+TITDL+GNTLSW S+G+  FKGSRK TP+AAQ AAE+AT++ARD + L +VEVV+KG G GRE AIR+++  G+ I+SI D T++PYNGCRPPKRRRV
Sbjct:    6 KKKGKHNVITGVAHIKSTFNNNIITITDLDGNTLSWGSAGSAGFKGSRKSTPYAAQLAAEKATVQARD-YGLKKVEVVIKGQGSGRETAIRSLYSNGLEIISITDITAVPYNGCRPPKRRRV 126          
BLAST of mRNA_H-paniculata_contig41099.10583.1 vs. uniprot
Match: A0A662D066_9BACT (30S ribosomal protein S11 n=1 Tax=Candidatus Aerophobetes bacterium TaxID=2030807 RepID=A0A662D066_9BACT)

HSP 1 Score: 150 bits (379), Expect = 1.520e-44
Identity = 70/123 (56.91%), Postives = 98/123 (79.67%), Query Frame = 0
Query:    1 MKKKNNLDIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQATLKARDEHKLNRVEVVVKGSGPGREPAIRAIHQKGVRIVSIKDETSIPYNGCRPPKRRRV 123
            +KKK  + ++ G++++H++FNNTI+TIT+LNG+ L W+S+G V FKG++KGTPFAAQK AE A  KA+ E +L RV VVVKG G GRE AIR +   G++++SIK+ T IP+NGCRPPK+R+V
Sbjct:    9 VKKKKKIKVEEGVVYIHSTFNNTIITITNLNGDVLCWSSAGGVGFKGTKKGTPFAAQKTAEDAAKKAKGEFQLERVRVVVKGPGSGRETAIRTLQAAGLKVISIKEATPIPHNGCRPPKKRKV 131          
BLAST of mRNA_H-paniculata_contig41099.10583.1 vs. uniprot
Match: A0A3M2BDZ6_9BACT (30S ribosomal protein S11 n=3 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A3M2BDZ6_9BACT)

HSP 1 Score: 150 bits (378), Expect = 2.160e-44
Identity = 75/122 (61.48%), Postives = 97/122 (79.51%), Query Frame = 0
Query:    2 KKKNNLDIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRKGTPFAAQKAAEQATLKARDEHKLNRVEVVVKGSGPGREPAIRAIHQKGVRIVSIKDETSIPYNGCRPPKRRRV 123
            +KK   +I  G+ H+HA+FNNTIV+ITD+NGN +SWAS G+V FKG++KGTPFAAQ A+E+A  +A  EH L +V+V+VKG GPGRE AIR++   G+ I SIKD T +P+NGCRPPKRRRV
Sbjct:   11 QKKERKNIVQGVAHIHATFNNTIVSITDVNGNVISWASGGSVGFKGTKKGTPFAAQVASERAA-RAAMEHGLRKVDVMVKGPGPGRETAIRSLQAAGLEIQSIKDVTPVPHNGCRPPKRRRV 131          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig41099.10583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F7M8_9PHAE2.290e-7492.68Ribosomal protein S11 n=1 Tax=Protohalopteris sp. ... [more]
A0A1I9LVI2_9PHAE2.090e-6178.8630S ribosomal protein S11, chloroplastic n=36 Tax=... [more]
A0A141BSM1_9PHAE8.150e-5974.8030S ribosomal protein S11, chloroplastic n=17 Tax=... [more]
A0A2I4Q2J0_9PHAE4.390e-5771.3130S ribosomal protein S11, chloroplastic n=1 Tax=D... [more]
A0A8E5XRL6_9PHAE7.460e-5570.7330S ribosomal protein S11, chloroplastic n=1 Tax=I... [more]
B7T1W4_VAULI2.760e-4664.7530S ribosomal protein S11, chloroplastic n=1 Tax=V... [more]
A0A8E5F964_9PHAE7.430e-4657.72Ribosomal protein S11 n=1 Tax=Phaeophyceae sp. Tax... [more]
A0A7U3NQU4_9STRA7.910e-4661.4830S ribosomal protein S11, chloroplastic n=1 Tax=S... [more]
A0A662D066_9BACT1.520e-4456.9130S ribosomal protein S11 n=1 Tax=Candidatus Aerop... [more]
A0A3M2BDZ6_9BACT2.160e-4461.4830S ribosomal protein S11 n=3 Tax=Armatimonadetes ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019981Ribosomal protein S11, bacterial-typeTIGRFAMTIGR03632TIGR03632coord: 3..120
e-value: 7.9E-50
score: 166.2
IPR036967Ribosomal protein S11 superfamilyGENE3D3.30.420.80coord: 1..123
e-value: 1.4E-49
score: 169.3
IPR001971Ribosomal protein S11PIRSFPIRSF002131RPS11p_RPS11a_RPS14e_RPS11ocoord: 1..123
e-value: 2.5E-47
score: 158.1
IPR001971Ribosomal protein S11PFAMPF00411Ribosomal_S11coord: 12..122
e-value: 5.4E-42
score: 142.6
IPR001971Ribosomal protein S11PANTHERPTHR1175940S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11coord: 2..123
IPR001971Ribosomal protein S11HAMAPMF_01310Ribosomal_S11coord: 2..123
score: 30.514
NoneNo IPR availablePANTHERPTHR11759:SF13coord: 2..123
NoneNo IPR availableSUPERFAMILY53137Translational machinery componentscoord: 9..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig41099contigH-paniculata_contig41099:325..696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig41099.10583.1mRNA_H-paniculata_contig41099.10583.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig41099 322..696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig41099.10583.1 ID=prot_H-paniculata_contig41099.10583.1|Name=mRNA_H-paniculata_contig41099.10583.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MKKKNNLDIKTGIMHVHASFNNTIVTITDLNGNTLSWASSGTVEFKGSRK
GTPFAAQKAAEQATLKARDEHKLNRVEVVVKGSGPGREPAIRAIHQKGVR
IVSIKDETSIPYNGCRPPKRRRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019981Ribosomal_S11_bac-type
IPR036967Ribosomal_S11_sf
IPR001971Ribosomal_S11