prot_H-paniculata_contig4107.10580.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4107.10580.1
Unique Nameprot_H-paniculata_contig4107.10580.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length319
Homology
BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: D8LR58_ECTSI (Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR58_ECTSI)

HSP 1 Score: 538 bits (1386), Expect = 1.700e-189
Identity = 269/304 (88.49%), Postives = 285/304 (93.75%), Query Frame = 0
Query:   16 KAETKTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIAVINLPRSGGVVQRNGQYRRASRAQRCREYFY 319
            K ET+TWVLQAETELRFDVSAEHTLTVVL+ENTAE+FGIELA +YEYKFSS KAAVFTWYGCT+ET GWVSSIYVAQ+TPMKSYVNTHAQLEARRDKALQALQAG +N+TGPRVMVVGE DSGKSTLANILAAYAVRLGRCPTFVDLDVGQGM+TVPGGIAAAALDSNSMSVEEGFSLTAPL  FYGHTSLQENPEL+K+LV RMAECLKRRVANDIDASASG IFNTCGWVEGLG  LLAHAI  L +DVVLVMKHDRLYADMVA+LPRS+AVINLPRSGGV  R+ QYRRASR +RCREYFY
Sbjct:    7 KVETRTWVLQAETELRFDVSAEHTLTVVLRENTAEMFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNITGPRVMVVGEADSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELFKKLVGRMAECLKRRVANDIDASASGAIFNTCGWVEGLGLELLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGVALRSSQYRRASRDRRCREYFY 310          
BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A6H5KLD2_9PHAE (Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD2_9PHAE)

HSP 1 Score: 536 bits (1381), Expect = 2.230e-178
Identity = 268/304 (88.16%), Postives = 284/304 (93.42%), Query Frame = 0
Query:   16 KAETKTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIAVINLPRSGGVVQRNGQYRRASRAQRCREYFY 319
            K ET+TWVLQAETELRFDVSAEHTLTVVLKENTAE+FGIELA +YEYKFSS KAAVFTWYGCT+ET GWVSSIYVAQ+TPMKSYVNTHAQLEARRDKALQALQAG +N+TGPRVMVVGE DSGKSTLANILAAYAVRLGRCPTFVDLDVGQGM+ VPGGIAAAALDSNSMSVEEGFSLTAPL  FYGHTSLQENPEL+K+LV RMAECLKRR+ANDIDASASG IFNTCGWVEGLG  LLAHAI  L +DVVLVMKHDRLYADMVA+LPRS+AVINLPRSGGV  R+ QYRRASR +RCREYFY
Sbjct:    7 KVETRTWVLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNITGPRVMVVGEADSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMIAVPGGIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELFKKLVGRMAECLKRRMANDIDASASGAIFNTCGWVEGLGLELLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGVALRSSQYRRASRDRRCREYFY 310          
BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A835YJV7_9STRA (Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV7_9STRA)

HSP 1 Score: 357 bits (917), Expect = 2.320e-118
Identity = 183/307 (59.61%), Postives = 229/307 (74.59%), Query Frame = 0
Query:   20 KTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSS-AKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVA---SLPRSI---AVINLPRSGGVVQRNGQYRRASRAQRCREYFY 319
            K W L+ E+ELRF+V  + + TVVL E +AE+FG+ELA + EY FS+ AK AVFTWYGC L+T      +YVA+DTPM SYVNTH QLEARRD+AL  L  G   V GPRV+V G TDSGKS+L  +L AYAVRLGR PTFVDLDVGQG +T+PG ++A +LDS ++S+EE  SL APL FFYGH S  ENPEL++ +V R+AEC+++R AND DA+A+G + NTCGWV+GLG  LL H I AL++D+VLVM HD+LYA+++A   +LP       V+ LP SGGVVQR+ Q RR  RA R REYFY
Sbjct:   13 KIWTLEKESELRFEVGPDKSFTVVLLEQSAEIFGVELAVNTEYHFSAGAKVAVFTWYGCKLQTTRTAEVLYVAKDTPMLSYVNTHIQLEARRDQALSKLSKGEKAV-GPRVLVAGATDSGKSSLCAVLCAYAVRLGRTPTFVDLDVGQGEITIPGTVSAVSLDSGTLSIEERLSLAAPLTFFYGHDSPGENPELFRHMVSRLAECVEQRQANDRDAAAAGTVVNTCGWVDGLGLELLRHCIDALSIDIVLVMGHDKLYAELMADSEALPDDAPPRTVVKLPTSGGVVQRSAQQRRQGRAARVREYFY 318          
BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: D0NWZ0_PHYIT (Pre-mRNA cleavage complex II protein Clp1, putative n=2 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NWZ0_PHYIT)

HSP 1 Score: 288 bits (738), Expect = 3.480e-92
Identity = 154/310 (49.68%), Postives = 208/310 (67.10%), Query Frame = 0
Query:   16 KAETKTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIA------VINLPRSGGVVQRNGQYRRASRAQRCREYFY 319
            +A T T V+  E E R +V  +  + + LK  +AE+FG+ELA D EY F   K A+FTWYGCTLE RG +   Y +++TPM SY+N HAQL+ RR+ A    +A H+   GPRV+V G  DSGKSTL  IL  YA+RLG  PT V+LDVGQG ++VPG I+A+ LD NS+S+EE F LT PLA+FYGH +  EN EL++   + +++ +KRR+AND + +ASG + NTCGWV+G GF +L HAI    VD+VLV+  DRLY+ + ++L  + A      ++ L RSGGVV  N + R A+R    REYFY
Sbjct:    4 EAATTTEVVARECEYRVEVPPQTEVGIKLKSGSAELFGVELAIDREYVFRDRKLAIFTWYGCTLEVRGALEEAYTSEETPMDSYLNIHAQLQRRRELA----KAKHA--AGPRVLVCGPVDSGKSTLTQILVNYALRLGEKPTLVELDVGQGCLSVPGTISASPLDMNSLSIEEDFILTNPLAYFYGHAASSENVELFRYQQQVLSKAVKRRLANDEEVNASGCVINTCGWVDGTGFDMLVHAIKDFDVDLVLVIGQDRLYSRLQSALTGANANGADRSIVKLSRSGGVVPLNSKMRSAARISSIREYFY 307          
BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: H3GV05_PHYRM (Protein CLP1 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=H3GV05_PHYRM)

HSP 1 Score: 289 bits (740), Expect = 6.130e-92
Identity = 156/303 (51.49%), Postives = 205/303 (67.66%), Query Frame = 0
Query:   23 VLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIA------VINLPRSGGVVQRNGQYRRASRAQRCREYFY 319
            VL  E E R +V  +  + V LK  +AE+FG+ELA D EY F   K A+FTWYGCTLE RG     Y ++DT M SY+N HAQL+ RR+ A    +A H+   GPRV+V G  DSGKSTL +ILA YA+RLG  PT V+LDVG G ++VPG ++A+ LD NS+S+EE F LT PLAFFYGH +  EN EL++   +++A+ +KRR+AND + +ASG + NTCGWV+G+GF LL HAI    VDVVLV+  DRL++ + +SL  + A      ++ L RSGGVV  N + R A+R    REYFY
Sbjct:    8 VLAREGEYRVEVPPQTEVGVRLKSGSAELFGVELAIDREYTFRDRKLAIFTWYGCTLEVRGAPEVAYTSEDTTMDSYLNIHAQLQRRRELA----KAKHA--AGPRVLVCGPVDSGKSTLTHILANYALRLGEKPTLVELDVGHGCLSVPGTLSASPLDMNSLSIEEDFILTNPLAFFYGHAAASENVELFRYQQQQLAKAVKRRLANDEEVNASGCVINTCGWVDGMGFDLLLHAIKEFEVDVVLVIGQDRLFSRLQSSLTGANANGVDRSIVKLSRSGGVVPLNSKLRSAARISCIREYFY 304          
BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A662XEK6_9STRA (Protein CLP1 homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XEK6_9STRA)

HSP 1 Score: 285 bits (728), Expect = 2.370e-90
Identity = 159/312 (50.96%), Postives = 208/312 (66.67%), Query Frame = 0
Query:   20 KTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSI------------AVINLPRSGGVVQRNGQYRRASRAQRCREYFY 319
            +T VL  E E R +VS +  + V LK  +AE+FG+ELA   EY F   K A+FTWYGCTLE RG     Y + +TPM SY+N HAQL+ RR+ A    +A H    GPRV+V G  DSGKSTLA ILA YA+RLG  PTFV+LDVG+G ++VPG +AA+ LD NS+SV E F LT PLAFFYG+T+  EN EL++   +R+A  +KRR+AND + +ASG + NT GWV+G+GF LL HAI  L VDVVLV+  DRL++ + ++L  +             +++ L RSGGVV  + + R A+R  R REYFY
Sbjct:   18 ETVVLARECEYRVEVSVQTEVGVRLKSGSAELFGVELAIGNEYVFRDKKLAIFTWYGCTLEVRGAPEVAYTSDETPMDSYLNIHAQLQRRRELA----RAKHG--AGPRVLVCGPVDSGKSTLAQILANYALRLGEKPTFVELDVGRGCLSVPGTLAASPLDMNSLSVAEEFILTNPLAFFYGYTAPTENVELFRYQQQRLATAVKRRLANDEEVNASGCVVNTGGWVDGVGFDLLVHAIQDLEVDVVLVIGQDRLFSRLQSALGGASPPAEGSSNAVDRSIVKLARSGGVVPLSSKLRSAARLSRIREYFY 323          
BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A2D4BR80_PYTIN (Protein CLP1 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR80_PYTIN)

HSP 1 Score: 285 bits (728), Expect = 3.690e-90
Identity = 148/302 (49.01%), Postives = 201/302 (66.56%), Query Frame = 0
Query:   23 VLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLP-----RSIAVINLPRSGGVVQRNGQYRRASRAQRCREYFY 319
            VL  E E R +V A   L V L   +AE+FG+ELA + EY     KAA+FTWYG TL+  G     Y +++TPM SY+N HAQL+ RR+ A+    AG      PRV++ G  DSGKSTL  IL  YA+RLG  PT VDLDVGQ  ++VPG +AA  LD N +SVEEG+ LT PL +F+GHTS+ EN E ++  +++++  +KRR+A D++A+ASG I NTCGWV+GLG+ LL  ++ A   DVVLV+  DRL++ + +SL      ++++++ L RSGGVV  N +YR A R  R REYFY
Sbjct:    5 VLGREGEYRVEVGASTELKVKLVSGSAELFGVELAINNEYTLRDQKAAIFTWYGATLQVTGTPEVAYTSEETPMNSYINIHAQLQKRRELAMLKGSAG------PRVLIAGPVDSGKSTLTQILLNYALRLGEKPTHVDLDVGQNSLSVPGSLAATPLDMNCLSVEEGYVLTNPLVYFFGHTSMSENVEHFRSHLQQLSRAVKRRLAEDVEANASGCIINTCGWVDGLGYDLLVESVRAFDADVVLVIGQDRLFSRLQSSLAQQVTSKNLSIVKLVRSGGVVPLNSKYRSAXRQSRIREYFY 300          
BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A5D6XVE7_9STRA (Protein CLP1 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVE7_9STRA)

HSP 1 Score: 285 bits (728), Expect = 4.400e-90
Identity = 156/321 (48.60%), Postives = 211/321 (65.73%), Query Frame = 0
Query:    1 MATSAANAGGNTTGVKAETKTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRS--IAVINLPRSGGVVQRNGQYRRASRAQRCREYFY 319
            MAT    AGG      A  +   L  E E R +V A++ +T+ LK  +AE+FG+ELA D  Y    AK AVFTW+GC LE  G     YV+++TPM SY+NTHAQL+ RR+ A     AG      PRV+V G  D+GKSTLA++L AYA+RLG  PTFVDLDVG+G ++VPG +AA  LD NS+S E  F LT PLA+F+GH +  +N EL++  ++++A  +KRR+ ND + +ASG + NTCGWV+G G+ LL  A+ A  VDVVLV+  DRL++ + +SL  S  ++++ L RSGGVV  N ++R A R  R R YFY
Sbjct:    1 MATPGVGAGG----ADAPVQQVALARECEYRVEVGAQNAVTLKLKSGSAELFGVELAPDRAYTLRDAKVAVFTWFGCVLEVGGAPDVAYVSEETPMNSYLNTHAQLQRRRELAAVKRAAG------PRVLVAGPVDAGKSTLAHVLLAYALRLGEKPTFVDLDVGEGALSVPGTLAATPLDMNSLSEE--FVLTNPLAYFFGHAAPADNVELFRHQMQQLAAAVKRRMENDAEVNASGCVINTCGWVDGAGYDLLVDAVAAFEVDVVLVIGQDRLFSRLQSSLASSAGLSIVKLARSGGVVPLNTKHRSARRLARTRGYFY 309          
BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A3R7G6W1_9STRA (Protein CLP1 homolog n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G6W1_9STRA)

HSP 1 Score: 283 bits (724), Expect = 1.520e-89
Identity = 152/303 (50.17%), Postives = 204/303 (67.33%), Query Frame = 0
Query:   23 VLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIA------VINLPRSGGVVQRNGQYRRASRAQRCREYFY 319
            VL  E E R +V  ++ + + LK  +AE+FG+ELA D EY F   K A+FTWYGCTLE RG     Y +++TPM SY+N HAQL+ RR+ A    +A H    GPRV+V G  DSGKSTL  IL  YA+RLG  PT V+LDVG G ++VPG ++A+ LD NS+SVEE F LT PLAFFYGHT+  EN EL++   +++A+ +KRR+ ND + +A+G + NTCGWV+G+GF LL HAI    +DVVLV+  DRLY+ + ++L  + A      ++ L RSGGVV  + + R A+R    REYFY
Sbjct:    7 VLAREGEYRVEVPPQNEVGIRLKSGSAELFGVELAIDREYVFRDRKLAIFTWYGCTLEVRGAPEVAYTSEETPMDSYLNIHAQLQRRRELA----KAKHG--AGPRVLVCGPVDSGKSTLTQILINYALRLGEKPTLVELDVGHGCISVPGTLSASPLDMNSLSVEEEFILTNPLAFFYGHTAPSENVELFRYQQQQLAKVVKRRLTNDEEVNAAGCVVNTCGWVDGVGFDLLVHAIKEFELDVVLVIGQDRLYSRLQSALTGANAGGVERSILKLSRSGGVVPLSTKLRSAARISCIREYFY 303          
BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: G4YIC2_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YIC2_PHYSP)

HSP 1 Score: 281 bits (720), Expect = 1.640e-89
Identity = 153/303 (50.50%), Postives = 202/303 (66.67%), Query Frame = 0
Query:   23 VLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIA------VINLPRSGGVVQRNGQYRRASRAQRCREYFY 319
            VL  E+E R +V  +  + V LK  +AE+FG+ELA   EY F   K A+FTWYGC LE RG     Y +++TPM SY+N HAQL+ RR+ A    +A H+   GPRV+V G  DSGKSTL  IL  YA+RLG  PT V+LDVG G ++VPG ++A+ LD NS+SVEE F LT PLAFFYGH +  EN EL++   +++A+ +KRR+AND + +ASG + NTCGWV+G+GF LL  AI    VDVVLV+  DRLY+ + ++L  + A      ++ L RSGGVV  N + R A+R    REYFY
Sbjct:    6 VLARESEYRVEVPPQTEVGVRLKSGSAELFGVELAIGREYVFRDRKLAIFTWYGCALEVRGAPEVAYTSEETPMDSYLNIHAQLQRRRELA----KAKHA--AGPRVLVCGPVDSGKSTLTQILVNYALRLGEKPTLVELDVGHGCLSVPGTLSASPLDMNSLSVEEDFILTNPLAFFYGHAASSENVELFRYQQQQLAKAVKRRLANDEEVNASGCVVNTCGWVDGMGFDLLVQAIKDFDVDVVLVIGQDRLYSRLQSTLAGANANGVDRSIVKLARSGGVVPLNSKLRSAARISCIREYFY 302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR58_ECTSI1.700e-18988.49Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5KLD2_9PHAE2.230e-17888.16Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1... [more]
A0A835YJV7_9STRA2.320e-11859.61Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID... [more]
D0NWZ0_PHYIT3.480e-9249.68Pre-mRNA cleavage complex II protein Clp1, putativ... [more]
H3GV05_PHYRM6.130e-9251.49Protein CLP1 homolog n=12 Tax=Phytophthora TaxID=4... [more]
A0A662XEK6_9STRA2.370e-9050.96Protein CLP1 homolog n=2 Tax=Nothophytophthora sp.... [more]
A0A2D4BR80_PYTIN3.690e-9049.01Protein CLP1 homolog n=1 Tax=Pythium insidiosum Ta... [more]
A0A5D6XVE7_9STRA4.400e-9048.60Protein CLP1 homolog n=1 Tax=Pythium brassicum Tax... [more]
A0A3R7G6W1_9STRA1.520e-8950.17Protein CLP1 homolog n=3 Tax=Phytophthora kernovia... [more]
G4YIC2_PHYSP1.640e-8950.50Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032324Clp1, N-terminal beta-sandwich domainPFAMPF16573CLP1_Ncoord: 24..113
e-value: 7.5E-29
score: 99.8
IPR032319Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domainPFAMPF16575CLP1_Pcoord: 133..319
e-value: 2.6E-63
score: 213.2
IPR038239Clp1, N-terminal beta-sandwich domain superfamilyGENE3D2.60.120.1030coord: 13..94
e-value: 1.1E-24
score: 87.9
NoneNo IPR availableGENE3D3.40.50.300coord: 95..319
e-value: 1.8E-83
score: 281.4
NoneNo IPR availablePANTHERPTHR12755CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1Pcoord: 16..319
NoneNo IPR availablePANTHERPTHR12755:SF6POLYRIBONUCLEOTIDE 5'-HYDROXYL-KINASE CLP1coord: 16..319
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 271..319
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 250..270
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..249
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 127..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4107contigH-paniculata_contig4107:4472..15784 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4107.10580.1mRNA_H-paniculata_contig4107.10580.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4107 4334..15784 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4107.10580.1 ID=prot_H-paniculata_contig4107.10580.1|Name=mRNA_H-paniculata_contig4107.10580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=319bp
MATSAANAGGNTTGVKAETKTWVLQAETELRFDVSAEHTLTVVLKENTAE
VFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYV
NTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYA
VRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFF
YGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGL
GFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIAVINLPRSGGVVQ
RNGQYRRASRAQRCREYFY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032324Clp1_N
IPR032319CLP1_P
IPR038239Clp1_N_sf
IPR027417P-loop_NTPase