mRNA_H-paniculata_contig4107.10580.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig4107.10580.1
Unique Name	mRNA_H-paniculata_contig4107.10580.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: D8LR58_ECTSI (Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR58_ECTSI)

HSP 1 Score: 538 bits (1386), Expect = 1.040e-188
Identity = 269/304 (88.49%), Postives = 285/304 (93.75%), Query Frame = 1

Query:  184 KAETKTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIAVINLPRSGGVVQRNGQYRRASRAQRCREYFY 1095
            K ET+TWVLQAETELRFDVSAEHTLTVVL+ENTAE+FGIELA +YEYKFSS KAAVFTWYGCT+ET GWVSSIYVAQ+TPMKSYVNTHAQLEARRDKALQALQAG +N+TGPRVMVVGE DSGKSTLANILAAYAVRLGRCPTFVDLDVGQGM+TVPGGIAAAALDSNSMSVEEGFSLTAPL  FYGHTSLQENPEL+K+LV RMAECLKRRVANDIDASASG IFNTCGWVEGLG  LLAHAI  L +DVVLVMKHDRLYADMVA+LPRS+AVINLPRSGGV  R+ QYRRASR +RCREYFY
Sbjct:    7 KVETRTWVLQAETELRFDVSAEHTLTVVLRENTAEMFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNITGPRVMVVGEADSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMITVPGGIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELFKKLVGRMAECLKRRVANDIDASASGAIFNTCGWVEGLGLELLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGVALRSSQYRRASRDRRCREYFY 310

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BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A6H5KLD2_9PHAE (Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLD2_9PHAE)

HSP 1 Score: 536 bits (1381), Expect = 1.370e-177
Identity = 268/304 (88.16%), Postives = 284/304 (93.42%), Query Frame = 1

Query:  184 KAETKTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIAVINLPRSGGVVQRNGQYRRASRAQRCREYFY 1095
            K ET+TWVLQAETELRFDVSAEHTLTVVLKENTAE+FGIELA +YEYKFSS KAAVFTWYGCT+ET GWVSSIYVAQ+TPMKSYVNTHAQLEARRDKALQALQAG +N+TGPRVMVVGE DSGKSTLANILAAYAVRLGRCPTFVDLDVGQGM+ VPGGIAAAALDSNSMSVEEGFSLTAPL  FYGHTSLQENPEL+K+LV RMAECLKRR+ANDIDASASG IFNTCGWVEGLG  LLAHAI  L +DVVLVMKHDRLYADMVA+LPRS+AVINLPRSGGV  R+ QYRRASR +RCREYFY
Sbjct:    7 KVETRTWVLQAETELRFDVSAEHTLTVVLKENTAEMFGIELAAEYEYKFSSTKAAVFTWYGCTIETTGWVSSIYVAQETPMKSYVNTHAQLEARRDKALQALQAGRTNITGPRVMVVGEADSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMIAVPGGIAAAALDSNSMSVEEGFSLTAPLVLFYGHTSLQENPELFKKLVGRMAECLKRRMANDIDASASGAIFNTCGWVEGLGLELLAHAITVLDIDVVLVMKHDRLYADMVATLPRSVAVINLPRSGGVALRSSQYRRASRDRRCREYFY 310

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BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A835YJV7_9STRA (Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV7_9STRA)

HSP 1 Score: 357 bits (917), Expect = 1.250e-117
Identity = 183/307 (59.61%), Postives = 229/307 (74.59%), Query Frame = 1

Query:  196 KTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSS-AKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVA---SLPRSI---AVINLPRSGGVVQRNGQYRRASRAQRCREYFY 1095
            K W L+ E+ELRF+V  + + TVVL E +AE+FG+ELA + EY FS+ AK AVFTWYGC L+T      +YVA+DTPM SYVNTH QLEARRD+AL  L  G   V GPRV+V G TDSGKS+L  +L AYAVRLGR PTFVDLDVGQG +T+PG ++A +LDS ++S+EE  SL APL FFYGH S  ENPEL++ +V R+AEC+++R AND DA+A+G + NTCGWV+GLG  LL H I AL++D+VLVM HD+LYA+++A   +LP       V+ LP SGGVVQR+ Q RR  RA R REYFY
Sbjct:   13 KIWTLEKESELRFEVGPDKSFTVVLLEQSAEIFGVELAVNTEYHFSAGAKVAVFTWYGCKLQTTRTAEVLYVAKDTPMLSYVNTHIQLEARRDQALSKLSKGEKAV-GPRVLVAGATDSGKSSLCAVLCAYAVRLGRTPTFVDLDVGQGEITIPGTVSAVSLDSGTLSIEERLSLAAPLTFFYGHDSPGENPELFRHMVSRLAECVEQRQANDRDAAAAGTVVNTCGWVDGLGLELLRHCIDALSIDIVLVMGHDKLYAELMADSEALPDDAPPRTVVKLPTSGGVVQRSAQQRRQGRAARVREYFY 318

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BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: D0NWZ0_PHYIT (Pre-mRNA cleavage complex II protein Clp1, putative n=2 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NWZ0_PHYIT)

HSP 1 Score: 288 bits (738), Expect = 1.720e-91
Identity = 154/310 (49.68%), Postives = 208/310 (67.10%), Query Frame = 1

Query:  184 KAETKTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIA------VINLPRSGGVVQRNGQYRRASRAQRCREYFY 1095
            +A T T V+  E E R +V  +  + + LK  +AE+FG+ELA D EY F   K A+FTWYGCTLE RG +   Y +++TPM SY+N HAQL+ RR+ A    +A H+   GPRV+V G  DSGKSTL  IL  YA+RLG  PT V+LDVGQG ++VPG I+A+ LD NS+S+EE F LT PLA+FYGH +  EN EL++   + +++ +KRR+AND + +ASG + NTCGWV+G GF +L HAI    VD+VLV+  DRLY+ + ++L  + A      ++ L RSGGVV  N + R A+R    REYFY
Sbjct:    4 EAATTTEVVARECEYRVEVPPQTEVGIKLKSGSAELFGVELAIDREYVFRDRKLAIFTWYGCTLEVRGALEEAYTSEETPMDSYLNIHAQLQRRRELA----KAKHA--AGPRVLVCGPVDSGKSTLTQILVNYALRLGEKPTLVELDVGQGCLSVPGTISASPLDMNSLSIEEDFILTNPLAYFYGHAASSENVELFRYQQQVLSKAVKRRLANDEEVNASGCVINTCGWVDGTGFDMLVHAIKDFDVDLVLVIGQDRLYSRLQSALTGANANGADRSIVKLSRSGGVVPLNSKMRSAARISSIREYFY 307

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BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: H3GV05_PHYRM (Protein CLP1 homolog n=12 Tax=Phytophthora TaxID=4783 RepID=H3GV05_PHYRM)

HSP 1 Score: 289 bits (740), Expect = 3.040e-91
Identity = 156/303 (51.49%), Postives = 205/303 (67.66%), Query Frame = 1

Query:  205 VLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIA------VINLPRSGGVVQRNGQYRRASRAQRCREYFY 1095
            VL  E E R +V  +  + V LK  +AE+FG+ELA D EY F   K A+FTWYGCTLE RG     Y ++DT M SY+N HAQL+ RR+ A    +A H+   GPRV+V G  DSGKSTL +ILA YA+RLG  PT V+LDVG G ++VPG ++A+ LD NS+S+EE F LT PLAFFYGH +  EN EL++   +++A+ +KRR+AND + +ASG + NTCGWV+G+GF LL HAI    VDVVLV+  DRL++ + +SL  + A      ++ L RSGGVV  N + R A+R    REYFY
Sbjct:    8 VLAREGEYRVEVPPQTEVGVRLKSGSAELFGVELAIDREYTFRDRKLAIFTWYGCTLEVRGAPEVAYTSEDTTMDSYLNIHAQLQRRRELA----KAKHA--AGPRVLVCGPVDSGKSTLTHILANYALRLGEKPTLVELDVGHGCLSVPGTLSASPLDMNSLSIEEDFILTNPLAFFYGHAAASENVELFRYQQQQLAKAVKRRLANDEEVNASGCVINTCGWVDGMGFDLLLHAIKEFEVDVVLVIGQDRLFSRLQSSLTGANANGVDRSIVKLSRSGGVVPLNSKLRSAARISCIREYFY 304

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BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A5D6XVE7_9STRA (Protein CLP1 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVE7_9STRA)

HSP 1 Score: 286 bits (733), Expect = 3.850e-90
Identity = 156/321 (48.60%), Postives = 211/321 (65.73%), Query Frame = 1

Query:  139 MATSAANAGGNTTGVKAETKTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRS--IAVINLPRSGGVVQRNGQYRRASRAQRCREYFY 1095
            MAT    AGG      A  +   L  E E R +V A++ +T+ LK  +AE+FG+ELA D  Y    AK AVFTW+GC LE  G     YV+++TPM SY+NTHAQL+ RR+ A     AG      PRV+V G  D+GKSTLA++L AYA+RLG  PTFVDLDVG+G ++VPG +AA  LD NS+S E  F LT PLA+F+GH +  +N EL++  ++++A  +KRR+ ND + +ASG + NTCGWV+G G+ LL  A+ A  VDVVLV+  DRL++ + +SL  S  ++++ L RSGGVV  N ++R A R  R R YFY
Sbjct:    1 MATPGVGAGG----ADAPVQQVALARECEYRVEVGAQNAVTLKLKSGSAELFGVELAPDRAYTLRDAKVAVFTWFGCVLEVGGAPDVAYVSEETPMNSYLNTHAQLQRRRELAAVKRAAG------PRVLVAGPVDAGKSTLAHVLLAYALRLGEKPTFVDLDVGEGALSVPGTLAATPLDMNSLSEE--FVLTNPLAYFFGHAAPADNVELFRHQMQQLAAAVKRRMENDAEVNASGCVINTCGWVDGAGYDLLVDAVAAFEVDVVLVIGQDRLFSRLQSSLASSAGLSIVKLARSGGVVPLNTKHRSARRLARTRGYFY 309

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BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A662XEK6_9STRA (Protein CLP1 homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XEK6_9STRA)

HSP 1 Score: 285 bits (728), Expect = 1.170e-89
Identity = 159/312 (50.96%), Postives = 208/312 (66.67%), Query Frame = 1

Query:  196 KTWVLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSI------------AVINLPRSGGVVQRNGQYRRASRAQRCREYFY 1095
            +T VL  E E R +VS +  + V LK  +AE+FG+ELA   EY F   K A+FTWYGCTLE RG     Y + +TPM SY+N HAQL+ RR+ A    +A H    GPRV+V G  DSGKSTLA ILA YA+RLG  PTFV+LDVG+G ++VPG +AA+ LD NS+SV E F LT PLAFFYG+T+  EN EL++   +R+A  +KRR+AND + +ASG + NT GWV+G+GF LL HAI  L VDVVLV+  DRL++ + ++L  +             +++ L RSGGVV  + + R A+R  R REYFY
Sbjct:   18 ETVVLARECEYRVEVSVQTEVGVRLKSGSAELFGVELAIGNEYVFRDKKLAIFTWYGCTLEVRGAPEVAYTSDETPMDSYLNIHAQLQRRRELA----RAKHG--AGPRVLVCGPVDSGKSTLAQILANYALRLGEKPTFVELDVGRGCLSVPGTLAASPLDMNSLSVAEEFILTNPLAFFYGYTAPTENVELFRYQQQRLATAVKRRLANDEEVNASGCVVNTGGWVDGVGFDLLVHAIQDLEVDVVLVIGQDRLFSRLQSALGGASPPAEGSSNAVDRSIVKLARSGGVVPLSSKLRSAARLSRIREYFY 323

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BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A2D4BR80_PYTIN (Protein CLP1 homolog n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR80_PYTIN)

HSP 1 Score: 285 bits (728), Expect = 1.820e-89
Identity = 148/302 (49.01%), Postives = 201/302 (66.56%), Query Frame = 1

Query:  205 VLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLP-----RSIAVINLPRSGGVVQRNGQYRRASRAQRCREYFY 1095
            VL  E E R +V A   L V L   +AE+FG+ELA + EY     KAA+FTWYG TL+  G     Y +++TPM SY+N HAQL+ RR+ A+    AG      PRV++ G  DSGKSTL  IL  YA+RLG  PT VDLDVGQ  ++VPG +AA  LD N +SVEEG+ LT PL +F+GHTS+ EN E ++  +++++  +KRR+A D++A+ASG I NTCGWV+GLG+ LL  ++ A   DVVLV+  DRL++ + +SL      ++++++ L RSGGVV  N +YR A R  R REYFY
Sbjct:    5 VLGREGEYRVEVGASTELKVKLVSGSAELFGVELAINNEYTLRDQKAAIFTWYGATLQVTGTPEVAYTSEETPMNSYINIHAQLQKRRELAMLKGSAG------PRVLIAGPVDSGKSTLTQILLNYALRLGEKPTHVDLDVGQNSLSVPGSLAATPLDMNCLSVEEGYVLTNPLVYFFGHTSMSENVEHFRSHLQQLSRAVKRRLAEDVEANASGCIINTCGWVDGLGYDLLVESVRAFDADVVLVIGQDRLFSRLQSSLAQQVTSKNLSIVKLVRSGGVVPLNSKYRSAXRQSRIREYFY 300

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BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: A0A3R7G6W1_9STRA (Protein CLP1 homolog n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G6W1_9STRA)

HSP 1 Score: 283 bits (724), Expect = 7.460e-89
Identity = 152/303 (50.17%), Postives = 204/303 (67.33%), Query Frame = 1

Query:  205 VLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIA------VINLPRSGGVVQRNGQYRRASRAQRCREYFY 1095
            VL  E E R +V  ++ + + LK  +AE+FG+ELA D EY F   K A+FTWYGCTLE RG     Y +++TPM SY+N HAQL+ RR+ A    +A H    GPRV+V G  DSGKSTL  IL  YA+RLG  PT V+LDVG G ++VPG ++A+ LD NS+SVEE F LT PLAFFYGHT+  EN EL++   +++A+ +KRR+ ND + +A+G + NTCGWV+G+GF LL HAI    +DVVLV+  DRLY+ + ++L  + A      ++ L RSGGVV  + + R A+R    REYFY
Sbjct:    7 VLAREGEYRVEVPPQNEVGIRLKSGSAELFGVELAIDREYVFRDRKLAIFTWYGCTLEVRGAPEVAYTSEETPMDSYLNIHAQLQRRRELA----KAKHG--AGPRVLVCGPVDSGKSTLTQILINYALRLGEKPTLVELDVGHGCISVPGTLSASPLDMNSLSVEEEFILTNPLAFFYGHTAPSENVELFRYQQQQLAKVVKRRLTNDEEVNAAGCVVNTCGWVDGVGFDLLVHAIKEFELDVVLVIGQDRLYSRLQSALTGANAGGVERSILKLSRSGGVVPLSTKLRSAARISCIREYFY 303

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BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Match: G4YIC2_PHYSP (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YIC2_PHYSP)

HSP 1 Score: 281 bits (720), Expect = 8.030e-89
Identity = 153/303 (50.50%), Postives = 202/303 (66.67%), Query Frame = 1

Query:  205 VLQAETELRFDVSAEHTLTVVLKENTAEVFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYVNTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYAVRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFFYGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGLGFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIA------VINLPRSGGVVQRNGQYRRASRAQRCREYFY 1095
            VL  E+E R +V  +  + V LK  +AE+FG+ELA   EY F   K A+FTWYGC LE RG     Y +++TPM SY+N HAQL+ RR+ A    +A H+   GPRV+V G  DSGKSTL  IL  YA+RLG  PT V+LDVG G ++VPG ++A+ LD NS+SVEE F LT PLAFFYGH +  EN EL++   +++A+ +KRR+AND + +ASG + NTCGWV+G+GF LL  AI    VDVVLV+  DRLY+ + ++L  + A      ++ L RSGGVV  N + R A+R    REYFY
Sbjct:    6 VLARESEYRVEVPPQTEVGVRLKSGSAELFGVELAIGREYVFRDRKLAIFTWYGCALEVRGAPEVAYTSEETPMDSYLNIHAQLQRRRELA----KAKHA--AGPRVLVCGPVDSGKSTLTQILVNYALRLGEKPTLVELDVGHGCLSVPGTLSASPLDMNSLSVEEDFILTNPLAFFYGHAASSENVELFRYQQQQLAKAVKRRLANDEEVNASGCVVNTCGWVDGMGFDLLVQAIKDFDVDVVLVIGQDRLYSRLQSTLAGANANGVDRSIVKLARSGGVVPLNSKLRSAARISCIREYFY 302

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4107.10580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LR58_ECTSI	1.040e-188	88.49	Protein CLP1 homolog n=1 Tax=Ectocarpus siliculosu...	[more]
A0A6H5KLD2_9PHAE	1.370e-177	88.16	Protein CLP1 homolog n=1 Tax=Ectocarpus sp. CCAP 1...	[more]
A0A835YJV7_9STRA	1.250e-117	59.61	Protein CLP1 homolog n=1 Tax=Tribonema minus TaxID...	[more]
D0NWZ0_PHYIT	1.720e-91	49.68	Pre-mRNA cleavage complex II protein Clp1, putativ...	[more]
H3GV05_PHYRM	3.040e-91	51.49	Protein CLP1 homolog n=12 Tax=Phytophthora TaxID=4...	[more]
A0A5D6XVE7_9STRA	3.850e-90	48.60	Protein CLP1 homolog n=1 Tax=Pythium brassicum Tax...	[more]
A0A662XEK6_9STRA	1.170e-89	50.96	Protein CLP1 homolog n=2 Tax=Nothophytophthora sp....	[more]
A0A2D4BR80_PYTIN	1.820e-89	49.01	Protein CLP1 homolog n=1 Tax=Pythium insidiosum Ta...	[more]
A0A3R7G6W1_9STRA	7.460e-89	50.17	Protein CLP1 homolog n=3 Tax=Phytophthora kernovia...	[more]
G4YIC2_PHYSP	8.030e-89	50.50	Uncharacterized protein (Fragment) n=1 Tax=Phytoph...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4107	contig	H-paniculata_contig4107:4334..15784 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	539.7
Seed ortholog evalue	9.5e-151
Seed eggNOG ortholog	2880.D8LR58
Preferred name	CLP1
KEGG ko	ko:K14399
KEGG Pathway	ko03015,map03015
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000166,GO:0000214,GO:0000375,GO:0000377,GO:0000394,GO:0000398,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006366,GO:0006369,GO:0006378,GO:0006379,GO:0006388,GO:0006396,GO:0006397,GO:0006399,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009117,GO:0009791,GO:0009892,GO:0009908,GO:0009987,GO:0010228,GO:0010467,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016246,GO:0016301,GO:0016310,GO:0016441,GO:0016458,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018130,GO:0019205,GO:0019222,GO:0019438,GO:0019637,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021549,GO:0021695,GO:0021953,GO:0022008,GO:0022037,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030182,GO:0030423,GO:0030554,GO:0030902,GO:0031047,GO:0031123,GO:0031124,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035087,GO:0035194,GO:0035639,GO:0036094,GO:0040029,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046939,GO:0048367,GO:0048513,GO:0048519,GO:0048608,GO:0048699,GO:0048731,GO:0048827,GO:0048856,GO:0048869,GO:0050789,GO:0051731,GO:0051732,GO:0051733,GO:0051734,GO:0051736,GO:0055086,GO:0060255,GO:0060322,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0070922,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090567,GO:0097159,GO:0097367,GO:0097659,GO:0099402,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1902555,GO:1905348
EggNOG free text desc.	mRNA 3'-end processing
EggNOG OGs	COG5623@1,KOG2749@2759
Ec32 ortholog description	Pre-mRNA cleavage complex II Clp1
Ec32 ortholog	Ec-06_004260.1
EC	2.7.1.78
COG Functional cat.	A
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko03019
Exons	8
Model size	1095
Cds size	957
Stop	0
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930254.2318048-UTR-H-paniculata_contig4107:4333..4471	1622930254.2318048-UTR-H-paniculata_contig4107:4333..4471	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4107 4334..4471 +
1691481212.040141-UTR-H-paniculata_contig4107:4333..4471	1691481212.040141-UTR-H-paniculata_contig4107:4333..4471	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4107 4334..4471 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4107.10580.1	prot_H-paniculata_contig4107.10580.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig4107 4472..15784 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig4107:4334..15784+
coding sequence from alignment at H-paniculata_contig4107:4334..15784+

protein sequence of mRNA_H-paniculata_contig4107.10580.1

>prot_H-paniculata_contig4107.10580.1 ID=prot_H-paniculata_contig4107.10580.1|Name=mRNA_H-paniculata_contig4107.10580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=319bp
MATSAANAGGNTTGVKAETKTWVLQAETELRFDVSAEHTLTVVLKENTAE
VFGIELATDYEYKFSSAKAAVFTWYGCTLETRGWVSSIYVAQDTPMKSYV
NTHAQLEARRDKALQALQAGHSNVTGPRVMVVGETDSGKSTLANILAAYA
VRLGRCPTFVDLDVGQGMVTVPGGIAAAALDSNSMSVEEGFSLTAPLAFF
YGHTSLQENPELYKRLVERMAECLKRRVANDIDASASGVIFNTCGWVEGL
GFSLLAHAIGALAVDVVLVMKHDRLYADMVASLPRSIAVINLPRSGGVVQ
RNGQYRRASRAQRCREYFY

mRNA from alignment at H-paniculata_contig4107:4334..15784+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig4107.10580.1 ID=mRNA_H-paniculata_contig4107.10580.1|Name=mRNA_H-paniculata_contig4107.10580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11451bp|location=Sequence derived from alignment at H-paniculata_contig4107:4334..15784+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTCTTTGACTACGGGTCTGATTAGTTGGCCTTGTTACTAAAGAAAAAACA
AGAAATATCATCGACACCTTCCTGTGGAACATTTTGGTGCCTTGTCTTGG
GCCGCTCCCATCCTGTCAAGCGAACATAACCAGTGAGTATGGCGACCTCG
GCCGCTAACGCAGGAGGCAATACTACAGGTGTTAAGGCGGAAACGAAGAC
GTGGGTACTACAGGCCGAGACGGAACTTAGGTTTGATGTATCCGCGGAGC
ACACCCTCACCGTTGTGGTGAGTTGAGTTGTCGCGCACGCGCGCGTTATT
GTCCTACAAAACACAGATATGGCAATGGCCGATCGCAATCGAACCGTCGG
GCGGGTGTCGCTGCTCTATTTGCGGTGCTGTCCTTGTTAGGAGCTCTCCT
GCGGGGGGAATTGGACGTTTTGTTATATTTCATGTTGGGAATAAAATGAG
CGGGGCGGAGCGCCTTAGGCGAAAGGAATGTTGATGACATATTAGTGCTT
TCATGTAAGGAAGGTGCAGTGCAGGCTGATGAAACCAAACAAACAAATAC
TTTAGTCTCTTCTACAGTACGATCAATTGAAGGTTTGTGCGAAGGGCAGA
GAACGGTAGAAATATACCCCATATCTGACTGACTTTCATCTCTGAAGAGA
CGTCTTGTCCTCAAGAGTGTGAGGGCTGTGCGTCAGCACAGTACTTGTGC
AGCACAGTTAATCCAGTACAGCAGTGGTACACATCCATACGAACAAGTAG
AGTAGCGCCTTTCTATTCGCTGATCTCGCGCGAGTTTACCTCCACAGGTA
TATTCATGCTCGACACAGAGGTGGTCGGAAAGTCCCCAGAGTAAGCTGTC
AAAGCGCTCTTGTAGGCAGTCCGTCGAGGGCTGTTTGACGAACGTGACAA
GACTAAAGCGTGAGGAGCGCACGAGGCAAATGAGGCATTGCTGGAATGTA
AAACTGATTTGTAATCTGCAGCCCAACAAAACGGTTGTACGCAGCAGTAC
TCTCGCCATTGCGTGCACGTAGAGTTGACTATGTTGCGAGAGAAACTCCG
CACGACGAGCAGGCACAGAGAAGATTTACTGATGTGAGGGTCAGACTGCC
ACTGGTGTGGAAGCTTACCGTCGAGTGTTTCGCCAGAAATGTCGAGCCGC
GTGTCCCACTAAGCGACAAGCCTGTTGTCTTTGCAGCCCCTCCTATCTAC
CTTCAAGTGAAGCGAGATGATTCTGGATTTCGGTCTTATATGGCGGCCAC
GGTGCCACGCCCATGAGCCGAGCAGGTCCCGAGAATAGAAGGGATGCTGG
GGCACACTAAATACCCTTGTCAGGGTCAGATCGTCAGATCACCGCCGGTC
TGGCAACGTTTCGTAAAGTTCAGCGCTTGAAATGTGGGAACAGCTAGTGC
GAGAAACGCATCAAATATAGGCAGGATTTATGCTTCGACTTCCTTTCAAC
ATTTTTTTTTTTGCATATCTTTGGTTTCATGATAAGGTTGTAACATCAAG
TAAAACCTAGATCCGCTTGGTATCAACCCAATGCACGTACTGCTGCAAAA
TGGCGAAAATGCAGAGGGTCCGGTCGCCAGGACTGCAGCGTTTGGGAATC
CGATTTGTCGAAAAATGTACATGGCGAGATTATTTTTATTCTAGAGTTCA
AGTCCAAGAATTCCGTTTTTTCCATGATGAATGAATCGGAACTGGTTTCC
AATATATATATATATATATATATATATGCGGTATGCGGCTGGTTTCTTTG
TTGCAAATTAATATGTGGGGATTACGTATTTTCAACATTTACAGAATTTC
ATTTTCAAGAGTTGACTTCCGGGAAATCCGTATCTTTCAGGGCTAATTAC
GGGACCACGAGACTGGACGAGACCAAGATATTTGAAAGTGTAACGGGACG
GGTCCTCCAAAATGTTTTTGAATTGTGCAATTTTTCGCCCCAGGATCAAA
AAGGAGATTGGTAGCAGCTTGAACTGAGATGAATTTACGGTACAGACCAC
CCCACCTCGAAGTGGGAATATAAAGTCGTTATTCTAAGCTCTTATGTGTG
GCGAAGAAGTGTTGCTGCTTAGTGTCATAATTTATTGCAATCTCTGAAAT
CTCCCGCTTCTCGTTTCCGGTGATCCTCCCGCCTTCGCGGCTTTGTTTGC
CTGTGGTATATTTCTCCAGCTGAAAGAAAACACTGCGGAGGTGTTCGGAA
TAGAGCTTGCCACCGACTACGAGTACAAGTTCTCCTCTGCTAAGGTAAAC
GAAATACACCCGGGGCCGAGAGGCTGGTGGGCACCAAAAGTAATGTAACA
GCAATGCGATAATGCCAGCACAATGGACGGGAATCGTTGGCTGGCGGCGA
CCTTAGCGGCGTTGGTGGTGATGGTGGTATTGCTCGAGTTTTGGCGTGTT
GCTGTCGCTGTCGCTGTCGCTGCTGCTGCTGCTGCTGCTGCTGATGTAGT
CGTTGTTGCGATGATGCCAAGTGGACAAAGCTGCGGTTGTGAGAATCAGG
AATTTTCATGTGCTGAACTGGGGATTGACCTTCCGGTAAGGCCTTCTGTA
CGAGGCGCGTAGCTTCGAATTTTCAGTTACCGTTGTGCGCACTTATCAGC
AAATTTATAACGACGTATATGGAGCTCTATTTCGGGGCTAAATAACCTGA
TCGCTCCACGTGGTTCTCGGTTAATATTTGAGCAACCCCTCTCCTCTCCT
CCCCCTTCCCTTGTCCCCTCGACATAAGTATACTTTGATGTGCACATAGA
AATTTCTTTACTTCCTCGCTCTCTCTCTTGCTTCGCTTTCACCCTGTCGA
TTTTGTGCAGGCGGCCGTGTTCACATGGTACGGTTGCACGTTGGAGACGA
GAGGGTGGGTGTCCAGCATATACGTGGCGCAAGACACCCCGATGAAGAGC
TACGTGAACACGCATGCCCAACTGGAGGCGAGGAGAGACAAGGCCCTTCA
GGCGCTCCAGGCCGGGCACTCCAATGTCACAGGTCCAAGGGTGAGGGGTA
AAAGAAAGGGGCGACCGGGGTTGTGCAAGTCTATATTAACTAGTGCTATA
TGTTTTGTGTGAAATGTTTTTGTTTTTTTTTGCCATTGTTTGTTTCAAGG
ATGTCTGCCCTTGTTGTTCGGGGAAAGGGGAGGGCAAGGGGGGAGGGGGG
AGGGGGCACCGGGATTCTCATTTGAAACTCAACCCTTAACACAGTTGATT
CAACTTCAGCTCTGTTGTTCATATAATTGCTCCATTGTACCCATGTTGAA
GTTATGCAGCTGACTTGGAACTTCAGTTGTGTTCACCTATCGGCACAAAA
ATATCGACAATGGAGGGAGGGGGAGCTTATTTTCGCGTTTTCTAGTAGTG
TTTTCGAACACACGACTTTTGTGGGGGATTTTCACGTTGTTTTTTTGCCA
CCATTTTGTCAAACGTGTAGAAATAGAGAATTTGAAATTTCTGTTGAGTT
ATTTTATGCCCGGTAGATTTCGATTGTGTTGCCGAGTTTTATTAGTCTTC
ATCCAGAAGCAGGAAAAGAGGAAATGCTACGGTTTATCTTTGCATCATTA
CTCTGTTTTTCCGGCTATCTTACTTTTCGTATTAGGAGATTCGCCCTGCA
TTTGTTTCCGTGTACGGGGTACACACATGCTGCCACAGGAGGTAGTATGT
GGTTGCTGGTATTTTTTGCGCGTCTGGTTTAGCCTGTGGAAATGTGTGTC
CTCTACCGCGGGTTGGAACAGTTGGTTCAAATAGTGTTGAAAACAAAAAA
AATAGTTTACCGGACAAACACAAGGAGGAGAAGAAGCCCTATTTTGTTTT
TGTGCAGGGCAGGACACAATCGGACAAGACGGCTGTCCGTGGCGGACCAG
ACGTCATCCCCAACAATACGATAATGTCAATATAAATATAGTGAGGTGCC
TGGGGTGGCCCTGCGTGTGAGGAGAGGGGGTCGCTTATTTGTGTCATTTT
GCTGATAGGTATACACAGACAGGTATCGTTGTCGAGTATGAGCTGCAACG
GTTCAGCCATGAATGCAAAAGGTAGTCAATTGAATGTACTTCGAATCGAT
ACTACGAGCACAAAAAGTAGGTTGATGAGCGAGGAGGTGGATATTTTTGC
CAACACTCTCCCCCCCTCGCTCTTTCTCTCTCTGGCGTCATGGCGGACCC
TTGATTTGTTGATTTGTTTCGTTTCACAACACCGAAAACAAACACGCACG
CACGCACGAAGGTAATGGTGGTGGGAGAGACGGACAGCGGCAAGTCGACG
CTAGCCAATATCCTCGCGGCGTACGCTGTCCGGTTAGGGCGATGTCCCAC
CTTTGTGGACCTCGACGTCGGCCAGGGGATGGTCACTGTTCCTGGGGGTA
TCGCCGCCGCCGCGCTAGACAGCAACTCCATGTCCGTAGAGGTAGGTGGG
TGCTGTCGAGGATACCCCGTATTTTATTACCAAAGTGGTGGTTGTGCTGA
CTGATGGCCATTTCCGAAATGGTGTTCCAATTCTGTACACCGCGCACAGC
TGTGACTGTACGACTGGTGCTGCAGCATACACCGTGTATCTAACGCCCCT
GGTGATCTGTGTTTGTTTTTGCGTCAGTTTCTCATCAGGGTACTGCTGTA
CGGCCAGGCCATACTGGGGGAGGGGATTTCGCATAATTGCATCACATCTC
CTTCTATCTTTCCCTGTCTGTGTGTATTTGGTTGGCTGCACTCCCCCACC
CTACCACGGCGCAGGAAGGATTTTCGTTGACGGCCCCGCTGGCCTTCTTC
TATGGACACACGAGCCTTCAGGAGAATCCGGAGCTGTACAAAAGACTCGT
GGTGAATAAGCGGATACGATAAGTGGGATCCGAAAAACGCCTACTTACAT
CGAAGAGTGTGATGATTTTGCCTTTGCGGCATGTAGTCCCTAGTCAATAA
TACTCTGAGGTGGTTGTCGTGTGTCATTGTTTCGGGACAGACTTGTATAA
GTCTTGGGTTAGGGTTTCCGTTCTGTCTCCAAATGTTCGTTTTTTCCTTC
ACAAGTCTGATTGTTTTTGTCAACATTTGTTCAGTTCACGCGTCCCGTTC
TACATTTTTTTTTTTTAGCATCTAGAAGCTTTTACGGAATCCATTTGTGT
CTTGCATCTCACGCCTCTTTTTCTTTCATGAATTTACAATATTTGGTCTC
AGGAACGCATGGCGGAGTGCTTGAAACGCAGAGTGGCTAATGACATCGAC
GCGAGCGCGTCGGGGGTAATTTTCAACACTTGTGGGTAAGAGAGAGACGA
GGTGGAAGAGGGGAGAGCAATAGAGGGCATGTGGGGGTCAGCCAGCCAAC
AGAAAACCTTCATCCTAATTACTCCGCCCAGGCAAAAGCTTGGGATGACG
TGGTGACCATTTTTTCCAACTAGTTGCGGGTAGTTTGGTGGGTACACTGA
CAGCCAATCGGTAAATCCATGGTTGAGCCCATTCTATGGATTATCGCCTC
TTCGTGGTGGATGGGATCAATTCACTAACAAATTTTGTGAGGCTAAGAAT
AGTCCGAAGATCGTCAAATCCATCGACAGGCTGGGATTGAGTGGGTCTGG
CAGGATTTGACGAACGAGAAAGTACTGGAAGAGAGTCAACCTTCGTGCCC
TGAGTGGAGCCAGTACCGCGATGCAGGTGGAACCAAGTAGCGCGATTGTA
GTTATCGTAACTTCAACCGAAGGAAACAAGAAGGATCCCTGTAAACTAAG
TAAACTAGTTACCTTTCTATGATCCGGATTGTCCTTACGCCTAAAAACAA
GAATGCAGGCTCAAGCATGTCGGAGAAGCAATTGGTATAAAACCTCCGAG
TTGTGTCGTTCCTGTCCCTAAATAGCCGCTCACTAATTCCAGTTGTAGAG
TCTGAAACCAAAACACGCTAGGTGCTGGGTACCTTAACGGGCACTTTCGC
AGCATCTACAGTTTTTTTTTTTTTAATGGAGTAGAGAACGAGGGGCCGCC
AAAGCTAACTCATAGCTGGTAGGGATTTGTTCAAGCGTCGGATAAATCTA
TTGCTCTGGAGTAGCCACTGCCAGAGGAAGAAACCACGGTCCGCCGGAAA
GTTCAAGTGGAACTTAGGGCTGGATTGAGGAAACTCTGGATGTTTGCGTT
CTGCAAATGGGGGAGTACGATAGGCATCTAGCAAGTGTCGTGTGGTTAAA
AGTTTCTTGTGAAACTTCCTTCTGGAAGGCCCGCGAACCGCGTAAGCGGG
GATGCATTTTTGAGACGAGTCTAAGCCTTAGGGTAGGGCATGGCTAAAAG
GGCAACCTTTGCCGATGACCTGACGGAAGTGAGATAGAAGGTCTTAACAT
GTGAGGTTCTGCTCTTAACGGGTGCAATCTAAAACCGCAATGCTAAAACG
GCCAAGTCACGTACAACCCAGCGGCCGAAAGCGGTTCTGGACGGCTATCC
CCTAAGGTCTAAGGTTAAAAGTGAAACCGTAAGATTGGACTGAGAAGACT
ATTAAACATGCGTTCTGCGTGGGTCTAGAATCAGAACATGGTAAAACGTG
TTGTTGGCTTAAGTTTCTTCCCTCTCAGTACTTTTGATACATATATATAT
ATATTTTATGTTCAGGGTGGAAAGAAAGAAAAAACGAAATCTGGGGTTGA
GCAATCAGCCAGATTTTCGGCGTATCTCTGTCGGACCAAACCGCTCATGG
ATGTCTTACGGCTTAAAGGAATATTCTGTTTCTCAGTCATTTTTTGTTGT
TGTGTTGTGTTTTGCTTTTGCTACAACAGGTGGGTGGAAGGCTTAGGCTT
CTCGCTTCTTGCGCATGCCATTGGCGCTCTCGCAGTGGATGTGGTTCTGG
TCATGAAGCATGACCGACTGTATGCGGACATGGTGGCAAGCCTACCCCGC
TCGATTGCTGTCATCAACTTACCAAGATCAGGAGGTAAAAGGCCATACAG
TACGGGCTCGCTGACAAGAATTTACCCCAAAAAAAATTGAGACCCAATTT
TTGCTAAGCCAAAAGAAATCCGACTGAAAAATTGGGGCTGAAATTGTGAT
CCCACACTAATTCCTTTGAAGAGAAGCAGTTCTACTGGCGACTCTCGCCA
AAGTAAGTGGCTCTTGCCATCAGGCTCTTACAGTTGCTCTCCTCGCACTG
ACGTGTACTAATCCATGTGGCGGGATATGCCACGGTTTTTGTTCAGTCAT
GCTCCAAGGATTGATGGCTTTCTGGAGTAATTGGGAACTTGCGGGTGCGC
GTTATATTAGATGATGGTAACACATACGGGATGAACTATTTTCGGGCCAG
TTCAGGAAGGGGGCGAAGTTTCCTCCCGGAGGGTGTGACTGCCGGAATGG
GAAAGTCCGCTGGTTCGGCCGAACCGGGGTGGCGCCTACCTACCCCGCAG
AGGAATAAATAACTCTGTTCTGTTAAAGGAAATGTAGAAATACTTCGGTA
GAAATACTTGAGTATGGAAGCATCGGATAAAGGTTTTTGCCTTAGCCTTC
CGGTGGTTAAAAAAAAAATGGGAAAGTCCGCGGTCAGGATTATTCCATTT
GAGCGATTTTATGTGCATACATATATAGTACAGTGTGTTGGAGAGGGCTG
AACGCTGCTGCTGCTGCTACTGCTCCAGCTGTGCACACTGTAGGGCTCAG
CAGCATTGGAAAAAAACATGAAAACATAACCGCAATCAGCACAAGACGGT
TGAACTAGAGGTGAGTCATAAAGAGATGATGGCGGAGGTTCACTGGCAGC
GGCAGTCGCTCGACAACAGTAGGGGAGGGTAGCCACCCCGATTGATCAAC
GCTGGAGTGACGACAATCGGTGAGTGCTCTTTCCTGAAAACTTGTGACAA
CTACAAACTTGAGGTTGGATTATCTCCTAACAAGGGTGATGTAGAGCGAC
AGGTGGTCAACCTACGAGGGCGGTGGCGGCCATACCATGGTATATCCAAA
AGATGATGGGATTTAACCTCGTTAGATGGAAGGAAATATGGGAGGAAGGA
GGCTTGGCGGTGAAATGCTACACGCTCGCTGGCCTGAGCAAGAAGTTTGC
TTTGCATCGAGAAAGATTTTATTCAACACAAAAAAAGTTCGCTGCGGACG
GACGAACCTACAAAGGGGCATGTTCACTATGGACGCTGTCTATATAGGCT
GCCAATCGAACGACAGATTCGCGGACGTCCACAGGGACCGCGATAACCTG
TTTCAAAAGGTGTCATGCCTGAGGGTAAATGGGGCACGGGCGGGCAGGCA
GCGTAGTGGTGAAAATTCCTCGTTTACAAGTAAGTTTTTGTGCCCAGCAG
AGTACAAGCGCCGGGAAGGTATAGACCCCTAAGGTAATGTAGGAAATCAA
AAGTAACGTTAACAAAAACCGCCGATTTTTCAAGGCAACGGAGAGTGAAG
GCACGGAGCCAAGAGGATAGTAGTGGGAAGAACACCTGCGGGAGACCGTC
AAGCCGGTCGTGAACAGCACAGTAAGGATAAGACTTGTCAAAAGAGGCGG
CCTGTGCTTGTCACGGTCGTCTAGGACTGGAAGATGACCGTAGGAGCGGC
GTCGGAAAAATGTTCGTACCCGGGGTATGCGGCCACGCTGTGGTCATCAG
CATAGACTCAAAGCTGTAGAGTGCCAGCACTAGCTGCCCTGGGACTCTGT
AGCTTTGTGTACGTGCTGGGATAATAGATGGAATATGCCACGAGGACTCG
CAACTTTTCCGACGTCGCTCCTCCACCGTACCTTACTCTGGCTTCCTGGA
AAATGAGCCGTCGGCGCAGGCCTTCTTTGTCACGAGTCTTCCTTCCCTGG
AGTTTTCACGTCCACCTCGCTCGACAGCAGCCTCCCCCGCTGGCGTTATT
CAACTGCTATCCTTCGCTTCTCACCTCTTGCTCTTCCATTATCTTGTAAG
CTGCATCGGAGGTTAGTTGTGATTTTCACGCTCTTTTTTGAAGGGGGTTT
GCACCTCCCGCTTGTGTTCATATTCGGACATGAAGGCCGTCTCAACAACG
GCGCCTTTTTTACCAGTATGATACCTGATCCCCGTGTTCCATCTGTCCTT
GGGCATGACTTGTTTGCAGAGCGAATGAATGTTCAGGTTGGATTGTGACT
CAAAACAGACTGCTGCTGCTGCTGCTGCATTTTTGCCAACCTGTCATCCA
AGGGTCCGCCCAAAGTTGATCCTCAACACAGCTTAGTCCCCAGCGAACGT
CCTTGTTGTAACTAAAAGTCATCTATGCAAAGAACTCGTCCAGGGCGGCG
CGTAGCATTTCATCGTCAGGGTTTCTTCCATATGGCGCCATCCGTTGCAT
ATATACATGTCTAGTCATGCTAGCCCAGTTGACGTGCTGCTCAACGGGGG
CTCCGGAATGGCGGGGGGCGGGAAGGGCGGAAGAGGTAGTGTCGTGAGAA
GTGACTGTAGAGTAGGTTGTACAAGCGGCACAGGCAAAGCACTTCATGGG
TGAGTGGGGCGGGCGGGTTAAGGCGCTTGCAGCGACGGTATCGTGTAAAG
GGAGGTTGTGTGAGGATTTGGTTGATGTTACGTACGTACAGGAACCCCTC
GTGATTGTGAAAGAGTTTGCTGTGTAATGTATATTTTTCAGCAGGGCCGG
ATGTACATACATTCGCCTGCACGGATAGGCTACCCCGAGTTCAGGGAGAA
ACGCACTGTGCAAAGCATGTACATGCCAGATAGCTGATGCGGAGTGACCG
TTTTTTTTGTTTGTTTTTTTCTAGGCATTATTGCTGTTCCAAACGACTGG
TGAATGTTGGCGATAGATTCATGGAGAAGAACTTTTCGTTAGAAGAGTTT
TTCTGCCGTGTTATCTTGGAATCATGTTTTTTTTTATTTGTCATGAATTT
GAAAACGAAAGGTCCTAGATAGGATCCAGCAATTGATGATTCGCGCAGAT
GGTGTTGAATTCAGAGACGGGCAGCCGATTTTAACGTGGTGCGCTTGTGG
CGAAGCGTGTAAAGATCTGGGATTGCATCGGGTGTAGTTGTTTCCCACCT
TGTGATGTTTTCGGTCGAGCCGGAGTTTCCCAGTTGAGGGACATTGGAGT
GTCTACCTTGATGACGCAGACGCTTGAAAGGATTGTGTGCGTGTAAATCG
AATGTACGGCTGCTGGTTCATCGGCGACGCATCGACGATGGAGTCTTCTA
TATATAATATATATATATATACCAAATTCTTGCGCATGCGCTGAGCATGC
AAGATGTATGCCATTGTGTGTGTATTTGTCTTGAATGCGACACACATTTT
TTACCATCTATGGAAGTATCACCTTTTTGTTACGGTAGAGCCTGATCAGC
GCTGTTTTTAAGCCATGGACAACGATTGATGTATGGTATTTAGTGCTTGC
TACAACTGAAGTATGTTGTGCGGCTGGCCCTGAGCTGATTATGTACGGTA
TATTTGAGCCGACGAATGTTTTAGCTGGGTCGATGTTTATTTTTGGCCTG
CTACCAGACGACGTTGTATGACCTTTTATGGATATGAGCGAAGCTGATGT
TAGATATGATTTTTACGCAGCGCACATTTGCACTATTATTTCTTGGGCAA
TTAAGGTGTCATGTGTGTGTGTGTTCTTATTTTCAGGCTTCGTTTTTATG
TATGAGGGATTTTTTCGTTTTTAAAAAATGTGCTGGCTGTTGTCTGCGAT
CGCTGAGTTGGTTTAGTAGGCGACTGGATTCGTGTGAATTTGTAGGAGGG
GGTGATGAGCAAATTCGCCGTGGTGTGCTAATACTTTGGGTGGCCACTGC
ATGTACTATGTGACGGATTTACTGCACGGTCTATTGGTTTGTATTCCAAC
AGTAGGTGGTTCTGGCGTGGTTCAGCACTTGCGTGCGTGTGATGCGTCAT
GAATGGTGAACTGCAGGGTAACCCCCTTCGGGCTAGTTCAGGAGGGAAGT
CCCAGACGGTGTGACTGCCAGAGTGGAAAATTCACAGCGAATGGTCTTGT
CCTGTGATCCAGTAGAGGGTAGAGATGTGCATCGGTTCGTAAAATTGACA
AACGATGCACCGATTTGTGCACTAAGCCAGTTTTTTAAACGTTGGTGAAT
CGTTTTTACTTTTTATTGGTGCCCCTCACCGTAAAAAGATGCCCACCGGA
TAATCAATAAGTGCAAAAATATCCTAATTGTTTTGGCGTGCGAAACCTGA
ATGTCCCCTTTTTGATGGAAAAAAAAATGCTGATGAGTGTATGTATACAA
GGGAAGATCAAAGTGAGCTACATAACCTACCTCATCGTGGATACAATGCA
GTTACTATATGAGTGACCCCTGACTTGAGTTATTCGTGCAGTTTGAAATA
CGACTGTCATGCCCATGATCGAACAACCGCTAAATTAAATTGTGTACTGG
CACAGGATTTCACCCGCCCTCTCGGTGCTTATCACAAGTACCCCTATCCC
TTTCGTTCTCTCGTGCCCATCCCCCTCCTACAGGGGTGGTTCAGCGCAAC
GGTCAATATCGACGGGCGTCTCGCGCACAGCGGTGCCGCGAGTACTTCTA
C

Coding sequence (CDS) from alignment at H-paniculata_contig4107:4334..15784+

>mRNA_H-paniculata_contig4107.10580.1 ID=mRNA_H-paniculata_contig4107.10580.1|Name=mRNA_H-paniculata_contig4107.10580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1914bp|location=Sequence derived from alignment at H-paniculata_contig4107:4334..15784+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGACCTCGGCCGCTAACGCAGGAGGCAATACTACAGGTGTTAAGGC
GGAAACGAAGACGTGGGTACTACAGGCCGAGACGGAACTTAGGTTTGATG
TATCCGCGGAGCACACCCTCACCGTTGTGATGGCGACCTCGGCCGCTAAC
GCAGGAGGCAATACTACAGGTGTTAAGGCGGAAACGAAGACGTGGGTACT
ACAGGCCGAGACGGAACTTAGGTTTGATGTATCCGCGGAGCACACCCTCA
CCGTTGTGCTGAAAGAAAACACTGCGGAGGTGTTCGGAATAGAGCTTGCC
ACCGACTACGAGTACAAGTTCTCCTCTGCTAAGCTGAAAGAAAACACTGC
GGAGGTGTTCGGAATAGAGCTTGCCACCGACTACGAGTACAAGTTCTCCT
CTGCTAAGGCGGCCGTGTTCACATGGTACGGTTGCACGTTGGAGACGAGA
GGGTGGGTGTCCAGCATATACGTGGCGCAAGACACCCCGATGAAGAGCTA
CGTGAACACGCATGCCCAACTGGAGGCGAGGAGAGACAAGGCCCTTCAGG
CGCTCCAGGCCGGGCACTCCAATGTCACAGGTCCAAGGGCGGCCGTGTTC
ACATGGTACGGTTGCACGTTGGAGACGAGAGGGTGGGTGTCCAGCATATA
CGTGGCGCAAGACACCCCGATGAAGAGCTACGTGAACACGCATGCCCAAC
TGGAGGCGAGGAGAGACAAGGCCCTTCAGGCGCTCCAGGCCGGGCACTCC
AATGTCACAGGTCCAAGGGTAATGGTGGTGGGAGAGACGGACAGCGGCAA
GTCGACGCTAGCCAATATCCTCGCGGCGTACGCTGTCCGGTTAGGGCGAT
GTCCCACCTTTGTGGACCTCGACGTCGGCCAGGGGATGGTCACTGTTCCT
GGGGGTATCGCCGCCGCCGCGCTAGACAGCAACTCCATGTCCGTAGAGGT
AATGGTGGTGGGAGAGACGGACAGCGGCAAGTCGACGCTAGCCAATATCC
TCGCGGCGTACGCTGTCCGGTTAGGGCGATGTCCCACCTTTGTGGACCTC
GACGTCGGCCAGGGGATGGTCACTGTTCCTGGGGGTATCGCCGCCGCCGC
GCTAGACAGCAACTCCATGTCCGTAGAGGAAGGATTTTCGTTGACGGCCC
CGCTGGCCTTCTTCTATGGACACACGAGCCTTCAGGAGAATCCGGAGCTG
TACAAAAGACTCGTGGAAGGATTTTCGTTGACGGCCCCGCTGGCCTTCTT
CTATGGACACACGAGCCTTCAGGAGAATCCGGAGCTGTACAAAAGACTCG
TGGAACGCATGGCGGAGTGCTTGAAACGCAGAGTGGCTAATGACATCGAC
GCGAGCGCGTCGGGGGTAATTTTCAACACTTGTGGGAACGCATGGCGGAG
TGCTTGAAACGCAGAGTGGCTAATGACATCGACGCGAGCGCGTCGGGGGT
AATTTTCAACACTTGTGGGTGGGTGGAAGGCTTAGGCTTCTCGCTTCTTG
CGCATGCCATTGGCGCTCTCGCAGTGGATGTGGTTCTGGTCATGAAGCAT
GACCGACTGTATGCGGACATGGTGGCAAGCCTACCCCGCTCGATTGCTGT
CATCAACTTACCAAGATCAGGAGGTGGGTGGAAGGCTTAGGCTTCTCGCT
TCTTGCGCATGCCATTGGCGCTCTCGCAGTGGATGTGGTTCTGGTCATGA
AGCATGACCGACTGTATGCGGACATGGTGGCAAGCCTACCCCGCTCGATT
GCTGTCATCAACTTACCAAGATCAGGAGGGGTGGTTCAGCGCAACGGTCA
ATATCGACGGGCGTCTCGCGCACAGCGGTGCCGCGAGTACTTCTACGGGT
GGTTCAGCGCAACGGTCAATATCGACGGGCGTCTCGCGCACAGCGGTGCC
GCGAGTACTTCTAC