prot_H-paniculata_contig40893.10547.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40893.10547.1
Unique Nameprot_H-paniculata_contig40893.10547.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length290
Homology
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA)

HSP 1 Score: 198 bits (504), Expect = 4.220e-57
Identity = 113/292 (38.70%), Postives = 166/292 (56.85%), Query Frame = 0
Query:    1 MDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIA-GHREKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAP--ESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS 289
            MDV  A+LN  +EEE+++K P  F    +    V  L+++LYGLKQS R WN ++D+F+  IG  +  TD C+Y  R D+    I VV+YVDDL++A    + +   K  +S+RFEM +LG L   LG+E+ RD   G +++ Q  ++  VL ++G   C+ V TP +  +K++    E   K  +   G    Y   VG++MY   GTRPD   AV   ++   +PC   +   KR+ RYL   P  GI F G  +G  L G+ DADWA D+E R+ST+G VF +N G I+
Sbjct:  104 MDVKTAFLNGLLEEEIYMKQPNGFVDAKYP-DHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDK--AMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQG--VPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCIT 389          
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA)

HSP 1 Score: 198 bits (504), Expect = 7.030e-57
Identity = 112/291 (38.49%), Postives = 173/291 (59.45%), Query Frame = 0
Query:    1 MDVDEAYLNAPVEEELFVKLPPEFSPF-SHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGH-REKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGH-GLEGFVDADWADDVEDRKSTTGNVFKMNSGAI 288
            MDV+ AYL + +EE+++VK PP +  + S+    V  LRKSLYGLKQS RNW+  +D +  G G    + D CLY       E  +++V+YVDDL+I  + RE V +FKH IS+ F M++L  L  +LG+ ++RD  K ++ ISQ +YI  +L ++    C+ V TP+EG   ++  +  D  P+       EY  +VGSL+YA+  TRPD  +AV    + ++   +E +   KR+ RYL    ++G+ + G S G   L G+ DAD+A D ++R+ST+G  F ++ G I
Sbjct:   84 MDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAKFRMADCKPVLTPMEGT--LTKMDGKDVKPD------NEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTREVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYAFTLSHGEI 365          
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 206 bits (524), Expect = 1.590e-56
Identity = 114/293 (38.91%), Postives = 168/293 (57.34%), Query Frame = 0
Query:    1 MDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGH-REKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITF---GGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS 289
            MDV  A+LN  ++EE+++  PP F    HD   V  LRKSLYGLKQ+ R W   +      +G +R   D  ++   K E    +++ +YVDD++IAG+ R  +D FK  +S+RFEM +LGS   +LG+E+ RD  +  ++ISQ  YI ++L+R+G   CR V TP+E  +K+     A   P+P       Y   +GSLMYA  G+RPD  +AV   ++    P  + +    R+FRYL    DL +++      SNG    G+ DADWA DV DR+ST+G  F ++ GA+S
Sbjct: 1099 MDVKSAFLNGDLDEEIYMTCPPGFD---HDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFV--KVENGVILIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATIDPKP-------YQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVS 1379          
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A146H7K8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H7K8_MYCCL)

HSP 1 Score: 196 bits (498), Expect = 1.670e-56
Identity = 104/290 (35.86%), Postives = 165/290 (56.90%), Query Frame = 0
Query:    1 MDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVI-AGHREKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS 289
            MD+  AYLN  ++EE++++ PP F   +     V  L+KS+YGL QS R+WN   D  +  +GL +   D+C+Y+  +D E+  + V V+VDDL+I A  +++ +  +  +   FEM+++G   +++GIE+ RD   G +T+SQ  YI  +L RYGF     V TP+         +     P        EY  M+G LMYA+  TRPD  YAV + ++   NP  E  + CKR+FRYLS   + G+ +G + +G   EG+ DAD+A +++DRKS +G  + +   A +
Sbjct:    1 MDIRGAYLNGELKEEVYMRQPPGFEDGTGR---VWRLKKSIYGLHQSGRDWNREFDRKVQSVGLTKTAADNCVYYRERDGEQ--VWVTVWVDDLIILATSKDEGERVRKELGTLFEMKDMGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSNLNAVSTPLVPDANTKMRQLPKDAPPAAPSVRAEYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFRYLSGTRNYGLVYGPQRDGVVFEGYCDADYAANLDDRKSISGYAYMLAGAAFA 285          
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 199 bits (505), Expect = 2.130e-55
Identity = 114/292 (39.04%), Postives = 177/292 (60.62%), Query Frame = 0
Query:    1 MDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVV-VYVDDLVIAGHR-EKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVK-ISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS 289
            MDV  A+LN  +E+E+++K P  F     +      L KSLYGLKQS R WN+ LD+ L  IG  +  +D C+Y     EE+ NI VV ++VDD+++AG   EK+ + K +I++RF+++++G L  +LG+++ ++  K  + I Q +Y   ++K+YG + C+ V TPV+   K +SA E ++        N  E+   VGSL+Y S+ TRPD  +AV+  A+   NP  E ++  KRIFRYL    + G+ +   +N   + GF DADWA D+ DRKST+G  F++N  A+S
Sbjct:  256 MDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVK---EEDGNIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAK--VWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSEL------FNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVS 534          
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A401H3M5_9APHY (Transposon Ty5-1 protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H3M5_9APHY)

HSP 1 Score: 191 bits (484), Expect = 2.930e-55
Identity = 107/289 (37.02%), Postives = 165/289 (57.09%), Query Frame = 0
Query:    1 MDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGHREKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS 289
            MDV  AYLNA +EE++F+K PP  +    +  +V HLR ++YGLKQS R W   +   L  +GL R   D C+++  +D +   +++ + VDD  IAG    V  FK  IS+ FEM +LG +  +LGIE+ RD     +++SQ +YI  ++ R+  +  + + TP+E    +S  +    P E +   +  Y   +GSLMYA+ GTRPD  +AV   ++ M+NP +  +   KR+ RYL    +  +T+G   +G  +EGF DADW    E R S +G VF ++ GA+S
Sbjct:    1 MDVKGAYLNAELEEDIFMKQPPGQAERGRE-HWVCHLRHAIYGLKQSGRQWFKKISAALDEMGLSRSLVDHCVFYLDEDNDSITLIIALSVDDTTIAGTNSAVLWFKTEISKHFEMTDLGEMHWILGIEVCRDRAARTLSLSQRAYIDGIVARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKGTRERWLTYGRTRDG--VEGFSDADWGSS-EHRHSISGYVFLIDGGAVS 285          
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM)

HSP 1 Score: 193 bits (491), Expect = 3.160e-55
Identity = 103/290 (35.52%), Postives = 164/290 (56.55%), Query Frame = 0
Query:    1 MDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGHREKVDEF-KHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS 289
            MDV  A+LN  ++E++++  P  +    H    V  L++SLYGLKQS R WN ++DDF++ +G  +  +D C+Y  R  ++   I V +YVDDLV+A   +++ E  KH +S+RFEM +LG L   LG+E++     G +T+ Q  +++ +L ++G    + V TP +  +K++            +  +  Y  +VG+LMY    TRPD   AV   ++   +PC   +   KR+ RYL   P  G+ F  + +  G+ G+ DADWA D+E R+ST+G  F MN G IS
Sbjct:    1 MDVKTAFLNGVLDEDIYMAQPDGYVDEDHP-DHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRDGQDM--IFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEF-SREDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCIS 286          
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 201 bits (512), Expect = 6.160e-55
Identity = 113/291 (38.83%), Postives = 177/291 (60.82%), Query Frame = 0
Query:    1 MDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGHR-EKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVK-ISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS 289
            MDV  A+LN  +E+E+++K P  F     +   V  L KSLYGLKQS R WN+ LD+ L  IG  +  +D C+Y   K+E+    +V ++VDD+++AG   EK+ + K +I++RF+++++G L  +LG+++ ++  K  + I Q +Y   ++K+YG + C+ V TPV+   K +SA E ++        N  EY   VGSL+Y S+ TRPD  +AV+  A+   NP  E ++  KRIFRYL    + G+ +   +N   + GF DADWA D+ DRKST+G  F++N  A+S
Sbjct:  870 MDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYV--KEEDGDIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAK--VWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSEL------FNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVS 1148          
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA)

HSP 1 Score: 201 bits (511), Expect = 8.500e-55
Identity = 113/291 (38.83%), Postives = 173/291 (59.45%), Query Frame = 0
Query:    1 MDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGHRE-KVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVE-GKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS 289
            +D+  AYLN+ ++EE++++ P  F    H    ++ L+K++YGLKQS R WNN+LD+ L  +G  R   ++CLY   K +++ +  + VYVDDL+I    E ++   K  IS +FEM + GSLS  LG+E++RD  +G +++ Q +YIR +LK YG   CR V TP++ G +     +S  K       N T+Y  ++GSLMY +  +RPD ++AV + ++R  NP  E  +  K I RYLS   +L I +  +  G  + GF DADWA+D  DRKS +G  F +   A S
Sbjct:  928 IDISNAYLNSSLDEEVYMRQPQNFISTEHPNKVLK-LKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYV--KQQQQGSSYIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKV------NVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY--RKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFS 1207          
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A2U1MW82_ARTAN (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1MW82_ARTAN)

HSP 1 Score: 201 bits (510), Expect = 1.150e-54
Identity = 111/292 (38.01%), Postives = 175/292 (59.93%), Query Frame = 0
Query:    1 MDVDEAYLNAPVEEELFVKLPPEFS-PFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAG-HREKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFG-GKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS 289
            +DV  A+L+  +EEE++V+ P  F  P   D   V  L+KSLYGLKQ  R W    D F++G G DR + D C+Y  RK  + + + +V+YVDD++IA  +++++ E K  +S  F+M++LG+  ++LG+E+RRD   G +T+SQ  YI +VLKR+    C+ + TP+    K+S+ E      + +  +   Y   VGSLMYA   TRPD  +AV   +R M NP +  +   K I RYL    ++G++F   +++ +G+ G+VD+D+A D++ RKS +  VF     AIS
Sbjct:  876 LDVKTAFLHGHLEEEIYVEQPEGFEVPGKED--HVCRLKKSLYGLKQYPRQWYKRFDSFMIGHGYDRCSYDECVYL-RKFPDGSFLYLVLYVDDMLIAAPNKDQIRELKDQLSNEFDMKDLGAAKKILGMEIRRDRKMGKLTLSQSDYISKVLKRFNMSNCKPILTPLAPHFKLSSHECPKSEEDKEDMSLVPYSSAVGSLMYAMVCTRPDLAHAVSVVSRYMHNPGRMHWKAVKCILRYLKGTSNIGLSFEKSRASPNGIVGYVDSDYAGDLDARKSLSSYVFSHCGSAIS 1164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5D6YB57_9STRA4.220e-5738.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
W7TCB8_9STRA7.030e-5738.49Gag-pol polyprotein n=3 Tax=Nannochloropsis gadita... [more]
A0A1M2VV58_TRAPU1.590e-5638.91Retrovirus-related Pol polyprotein from transposon... [more]
A0A146H7K8_MYCCL1.670e-5635.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9HZ03_PARCT2.130e-5539.04Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401H3M5_9APHY2.930e-5537.02Transposon Ty5-1 protein n=1 Tax=Sparassis crispa ... [more]
H3GB98_PHYRM3.160e-5535.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6S7HEL0_PARCT6.160e-5538.83Retrovirus-related Pol poly from transposon TNT 1-... [more]
W8BWJ0_CERCA8.500e-5538.83Retrovirus-related Pol polyprotein from transposon... [more]
A0A2U1MW82_ARTAN1.150e-5438.01Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..166
e-value: 2.4E-37
score: 128.9
NoneNo IPR availablePANTHERPTHR11439:SF257coord: 84..276
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..207
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 84..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40893contigH-paniculata_contig40893:517..1446 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40893.10547.1mRNA_H-paniculata_contig40893.10547.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40893 184..1506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40893.10547.1 ID=prot_H-paniculata_contig40893.10547.1|Name=mRNA_H-paniculata_contig40893.10547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp
MDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRN
WNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGHR
EKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREV
LKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLM
YASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFG
GKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like