mRNA_H-paniculata_contig40893.10547.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU) HSP 1 Score: 300 bits (768), Expect = 2.190e-87 Identity = 173/431 (40.14%), Postives = 250/431 (58.00%), Query Frame = 1
Query: 4 STLRTVFCLATKHNLELEGMDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGH-REKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITF---GGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS*SSRKQQLVTWSSKEAECVAAGEAGKETIYLRELLGSIGF---------GCKGSTTLFEDNKSAIHLSKGSGPHCRTKHMGMRWHEIREWIREVLLALKYVQTGDQVADILTKGLSRVK 1257
+++RTV LA ++L+++ MDV A+LN ++EE+++ PP F HD V LRKSLYGLKQ+ R W + +G +R D ++ K E +++ +YVDD++IAG+ R +D FK +S+RFEM +LGS +LG+E+ RD + ++ISQ YI ++L+R+G CR V TP+E +K+ A P+P Y +GSLMYA G+RPD +AV ++ P + + R+FRYL DL +++ SNG G+ DADWA DV DR+ST+G F ++ GA+S S+KQQ + SS EAE VA A KE ++LR LL + G K + L DN+SA+ L+K S H RTKH+ +R H IR+ I L +YV T DQVAD+LTK L+R K
Sbjct: 1080 ASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFD---HDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFV--KVENGVILIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATIDPKP-------YQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSIAQSSTEAEYVALASAAKEALWLRALLDDLAIPASISRSSPGSKVTPLLLVDNQSAMALAKNSTFHDRTKHIAVRHHFIRDEIERGTLEAEYVPTDDQVADVLTKALAREK 1498
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 281 bits (720), Expect = 6.020e-85 Identity = 158/422 (37.44%), Postives = 255/422 (60.43%), Query Frame = 1
Query: 7 TLRTVFCLATKHNLELEGMDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVV-VYVDDLVIAGHR-EKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVK-ISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS*SSRKQQLVTWSSKEAECVAAGEAGKETIYLRELLGSIGFGCKGSTTLFEDNKSAIHLSKGSGPHCRTKHMGMRWHEIREWIREVLLALKYVQTGDQVADILTKGLSRVKFQ 1263
++RTV L+ + L+L MDV A+LN +E+E+++K P F + L KSLYGLKQS R WN+ LD+ L IG + +D C+Y EE+ NI VV ++VDD+++AG EK+ + K +I++RF+++++G L +LG+++ ++ K + I Q +Y ++K+YG + C+ V TPV+ K +SA E ++ N E+ VGSL+Y S+ TRPD +AV+ A+ NP E ++ KRIFRYL + G+ + +N + GF DADWA D+ DRKST+G F++N A+S S+KQ V S+ AE VA A +E +++R+LL + T++EDN+SAI +SK H R+KH+ ++++ +R+ + + L + Y TG +AD+ TKG+ + +F+
Sbjct: 238 SIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVK---EEDGNIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAK--VWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSEL------FNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFK 646
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A438BTG2_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BTG2_VITVI) HSP 1 Score: 276 bits (706), Expect = 2.800e-84 Identity = 160/423 (37.83%), Postives = 251/423 (59.34%), Query Frame = 1
Query: 1 ISTLRTVFCLATKHNLELEGMDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGH-REKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFG-GKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS*SSRKQQLVTWSSKEAECVAAGEAGKETIYLRELLGSIGFGCKGSTTLFEDNKSAIHLSKGSGPHCRTKHMGMRWHEIREWIREVLLALKYVQTGDQVADILTKGLSRVKFQ 1263
+S++RTV +A NLE+E +DV A+L+ +EEE++++ P F +D V L+KSLYGLKQ+ R W D F+ G R T+D C+ F +K + I++++YVDD++I G K+ + K +S+ F M++LG ++LGI + R+ G+I +SQ +Y+++VL+R+ DK + V P+ G K+S+ + E Y +GSLMYA TRPD +AV +R + NP +E ++ K I RYL + + FG G+ L+GF D+D A DV+ RKST+G + GA++ SR Q+ V S+ EAE +A EA KE ++L++ L +G + L D++SAIHLSK S H R+KH+ +R+H IR+ + + LL L+ V T D +D+LTK L++ K +
Sbjct: 98 MSSIRTVLGIAASMNLEVEQLDVKTAFLHGDLEEEIYMEQPEGFIDKGND-QLVCKLKKSLYGLKQAPRQWYRKFDSFMTEHGYSRTTSDHCV-FVKKYTDGNFIILLLYVDDMLIVGQDMSKISKLKSELSKSFAMKDLGPAKQILGIRIVRNRSHGLIWLSQENYVKKVLERFNMDKAKPVNCPLAGHFKLSSSQCPTSDEEKNEMQKIPYASAIGSLMYAMVCTRPDIAHAVGVVSRFISNPGKEHWAAVKWILRYLQGTSKMSLCFGKGEPI---LDGFTDSDMAGDVDSRKSTSGYLITFAGGAVTWQSRLQKCVALSTTEAEFIAITEACKELLWLKKFLQELGLKQE-RYVLHCDSQSAIHLSKNSSFHSRSKHIDVRYHWIRDVLNDKLLQLEKVHTDDNTSDMLTKALTKDKHE 514
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4) HSP 1 Score: 280 bits (717), Expect = 6.300e-84 Identity = 164/419 (39.14%), Postives = 237/419 (56.56%), Query Frame = 1
Query: 4 STLRTVFCLATKHNLELEGMDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVI-AGHREKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS*SSRKQQLVTWSSKEAECVAAGEAGKETIYLRELLGSIGFGCKGSTTLFEDNKSAIHLSKGSGPHCRTKHMGMRWHEIREWIREVLLALKYVQTGDQVADILTKGLSRVK 1257
+++RT+ L T+ +LE+ MDV A+LN ++EE+++ LPP F + L+K LYGLKQ+ R W L +G R ++ ++ KD+ ++V VYVDDL+I + E V + K ++ +FEM +LG +LG+E+ RD P ++ISQ +Y E+L+R+G C+ PTP+E V + A+ +S Y VGSLMY GT PD ++V ++ P +E KR+ RY+ DLG+ F G N +E F+DADWA D +R S TG V + IS SS+KQ SS EAE +AA A KE ++LR + +GF T L+ DN+SAI L K S H RTKH+ +R+H IRE + + + L Y+ T DQVAD LTKGLS+VK
Sbjct: 296 TSIRTLLALTTELDLEIHQMDVKTAFLNRDLKEEIYMNLPPGFRKPG----VIWKLKKGLYGLKQASREWYKKLCTEFESMGFRRCNSNHAVFI--KDDNGIRVVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPMEVGVSLRKLSEAEV-------DSQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTK-IEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRENVEDEQIELVYIPTEDQVADALTKGLSKVK 700
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 288 bits (738), Expect = 9.840e-84 Identity = 159/420 (37.86%), Postives = 255/420 (60.71%), Query Frame = 1
Query: 10 LRTVFCLATKHNLELEGMDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGHR-EKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVK-ISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS*SSRKQQLVTWSSKEAECVAAGEAGKETIYLRELLGSIGFGCKGSTTLFEDNKSAIHLSKGSGPHCRTKHMGMRWHEIREWIREVLLALKYVQTGDQVADILTKGLSRVKFQ 1263
+RTV L+ + L+L MDV A+LN +E+E+++K P F + V L KSLYGLKQS R WN+ LD+ L IG + +D C+Y K+E+ +V ++VDD+++AG EK+ + K +I++RF+++++G L +LG+++ ++ K + I Q +Y ++K+YG + C+ V TPV+ K +SA E ++ N EY VGSL+Y S+ TRPD +AV+ A+ NP E ++ KRIFRYL + G+ + +N + GF DADWA D+ DRKST+G F++N A+S S+KQ V S+ EAE VA A +E +++R+LL + T++EDN+SAI +SK H R+KH+ +++H +R+ + + L + Y TG +AD+ TKG+ + +F+
Sbjct: 853 IRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKE-HLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYV--KEEDGDIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAK--VWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSEL------FNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFK 1260
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM) HSP 1 Score: 288 bits (738), Expect = 1.910e-83 Identity = 166/419 (39.62%), Postives = 244/419 (58.23%), Query Frame = 1
Query: 4 STLRTVFCLATKHNLELEGMDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGHR-EKVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS*SSRKQQLVTWSSKEAECVAAGEAGKETIYLRELLGSIGFGCKGSTTLFEDNKSAIHLSKGSGPHCRTKHMGMRWHEIREWIREVLLALKYVQTGDQVADILTKGLSRVK 1257
++LRT+ L KH+LEL MDV AYLN +EEE++++ PP F D V L KS+YGLKQ+ R W ++ +G R D ++ +D + T +++++YVDD+ A + E + + K +S+ FE+ +LG + +LG+E+ RD I+T+SQ YI +VL+R+GF R + TPV K+ +A+ ++ +Y VGSLMYA GTRPD YAV ++ P E ++ R F+YL D + + GK L G+VD+DWA+D DR+S +G VF + AIS SS+KQQ V SS EAE +AA A KE ++LR LL + + T L DN+ AI L+K H TKH+ +R H +R+ + + +A +Y+ T DQVAD+LTKGLSR K
Sbjct: 986 NSLRTLLALTAKHDLELHQMDVKTAYLNGDLEEEIYMEPPPGFRG---DGNIVWRLIKSIYGLKQAGRVWYMRIEREFRDLGYSRSYADYGVFVFHRDSDGTLLIIIIYVDDIGAASNSMEAILQAKARLSKIFEITDLGEMRWILGMEVTRDRALKIVTLSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPAAEI-------DARKYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTKGLSREK 1394
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: A0A5S6QJX2_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QJX2_TRIMR) HSP 1 Score: 273 bits (697), Expect = 2.150e-83 Identity = 162/420 (38.57%), Postives = 246/420 (58.57%), Query Frame = 1
Query: 7 TLRTVFCLATKHNLELEGMDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGHREKVD-EFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGH-GLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS*SSRKQQLVTWSSKEAECVAAGEAGKETIYLRELLGSIGFGCKGSTTLFEDNKSAIHLSKGSGPHCRTKHMGMRWHEIREWIREVLLALKYVQTGDQVADILTKGLSRVKF 1260
T+R +F + N+ + +DV AYLN ++EELF++ PP FS + +R LR+SLYGLKQS R WN D L +G D CL FSR ++ T V++YVDDL+IAG ++ + ++ FE+++LG + + LG+++ R+ G + Q + +R +LK +G + V TP+E S E + K P+ + EY +GSL+Y +T TRPD +AV Q R ME+P Q D+ KR+ RYL+ P + F +NG L GFVDADWA D DRKST+G FK+ + ++ SSRKQ V SS EAE +AA EA ++ +++R++L IG T ++EDN+ I +++ RTKH+ +R+H++RE ++AL Y + + AD+LTK L++ KF
Sbjct: 69 TVRILFAVVAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTGGKVLR-LRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCL-FSRSEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREED-GSFLLYQAAKVRHLLKEHGLLDAKPVATPMEANFLSSTEEESPKLPD-----NAEYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRF--SANGSIKLSGFVDADWAGDQADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYIAASEACRDLLWIRQVLEDIGIEQVEPTIVYEDNQGCIKMAQSERHTRRTKHIDIRYHQLRELQESGIIALTYCPSNEMPADMLTKPLTKDKF 478
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: W8BWJ0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BWJ0_CERCA) HSP 1 Score: 288 bits (736), Expect = 2.550e-83 Identity = 166/419 (39.62%), Postives = 245/419 (58.47%), Query Frame = 1
Query: 7 TLRTVFCLATKHNLELEGMDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGHRE-KVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVE-GKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS*SSRKQQLVTWSSKEAECVAAGEAGKETIYLRELLGSIGFGCKGSTTLFEDNKSAIHLSKGSGPHCRTKHMGMRWHEIREWIREVLLALKYVQTGDQVADILTKGLSRVK 1257
T+R +F +A + L + +D+ AYLN+ ++EE++++ P F H ++ L+K++YGLKQS R WNN+LD+ L +G R ++CLY K +++ + + VYVDDL+I E ++ K IS +FEM + GSLS LG+E++RD +G +++ Q +YIR +LK YG CR V TP++ G + +S K N T+Y ++GSLMY + +RPD ++AV + ++R NP E + K I RYLS +L I + + G + GF DADWA+D DRKS +G F + A S SS KQ +V SS EAE VA A KE +YLR LL IG+ + DN A ++SK H RTKH+ +++H IRE + + LK+V T VADI TK L + K
Sbjct: 910 TIRMLFAIAAEKQLFMHQIDISNAYLNSSLDEEVYMRQPQNFISTEHPNKVLK-LKKAIYGLKQSGRAWNNTLDEVLQNMGFKRSKNEACLYV--KQQQQGSSYIAVYVDDLIIISPSENEICAIKRQISSKFEMHDSGSLSYFLGLEIQRDGKQGYVSLCQKTYIRNLLKTYGMQNCRAVATPLDPGFLVCCKDDSCVKV------NVTQYQSLIGSLMYLAILSRPDILHAVSKLSQRNTNPHTEHENAAKHILRYLSGTINLSIVY--RKTGEPVVGFADADWANDQLDRKSYSGYTFFLAGSAFSWSSAKQSIVALSSTEAEYVALTAAAKEAVYLRRLLAEIGWSAGEPMVINGDNMGAQYISKNPVHHKRTKHIDIKFHFIREKVASNEIELKFVSTDKNVADIFTKSLCKQK 1317
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: H3H8W9_PHYRM (Integrase catalytic domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8W9_PHYRM) HSP 1 Score: 280 bits (717), Expect = 4.220e-83 Identity = 151/413 (36.56%), Postives = 242/413 (58.60%), Query Frame = 1
Query: 31 ATKHNLELEGMDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGHREKV-DEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS*SSRKQQLVTWSSKEAECVAAGEAGKETIYLRELLGSIG-FGCKGSTTLFEDNKSAIHLSKGSGPHCRTKHMGMRWHEIREWIREVLLALKYVQTGDQVADILTKGLSRVKFQ 1263
A K+ L+L MDV A+LN ++E++++ P + H V L++SLYGLKQS R WN ++DDF++ +G + +D C+Y R ++ I V +YVDDLV+A +++ + KH +S+RFEM +LG L LG+E++ DH G +T+ Q +++ +L ++G + V TP + +K++ + + Y VG+LMY TRPD AV ++ +PC + KR+ RYL P G+ F + + G+ G+ DADWA D+E R+ST+G F MN G IS S+KQ+ V SS EAE +A EA +E ++L+ L +G + ++EDN+ +I L+K H RTKH+ +R+H +RE + + + L+YV T D +AD++TK ++ V+FQ
Sbjct: 392 AAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGYVDEDHP-DHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRDGQDM--IFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEF-SREDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQFQ 800
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI) HSP 1 Score: 286 bits (733), Expect = 5.040e-83 Identity = 159/422 (37.68%), Postives = 249/422 (59.00%), Query Frame = 1
Query: 1 ISTLRTVFCLATKHNLELEGMDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNWNNSLDDFLVGIGLDRFTTDSCLYFSRKDEEETNILVVVYVDDLVIAGHRE-KVDEFKHNISQRFEMEELGSLSRVLGIELRRDHPKGIITISQGSYIREVLKRYGFDKCRGVPTPVEGKVKISAPESADKPPEPKSGNSTEYGGMVGSLMYASTGTRPDRVYAVHQAARRMENPCQEDFSTCKRIFRYLSTVPDLGITFGGKSNGHGLEGFVDADWADDVEDRKSTTGNVFKMNSGAIS*SSRKQQLVTWSSKEAECVAAGEAGKETIYLRELLGSIGFGCKGSTTLFEDNKSAIHLSKGSGPHCRTKHMGMRWHEIREWIREVLLALKYVQTGDQVADILTKGLSRVKFQ 1263
++TLRT+ +A + N L+ +DV A+L + E+++++ PE ++ D+ F L KSLYGLKQ+ + W+ D+++ +GL++ +D CLY + I +++YVDD++IAG K+ E K + + FEME+ G L+ LG+++ D G + I+Q Y+ +VLK++ D C + TP+E K+ I + K + Y +VGSLMYA G+RPD YA++ R P + ++ KR+ RY+ + G+ F +SN L GFVDADWA DRKSTTG +FK+ + +S S+++Q V SS EAE +A A E I++R+LL + G LFEDN+ AIHLS H R+KH+ + H +RE ++E L+ LKY+ T +Q+AD+LTKGL +F+
Sbjct: 861 LTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQ-PEGLNYNSDMIFK--LNKSLYGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIEE--------DNKQECNQPYRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECHWNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHHFVREKVKEGLIELKYIPTSNQLADLLTKGLGNERFK 1271 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40893.10547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig40893.10547.1 >prot_H-paniculata_contig40893.10547.1 ID=prot_H-paniculata_contig40893.10547.1|Name=mRNA_H-paniculata_contig40893.10547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=290bp MDVDEAYLNAPVEEELFVKLPPEFSPFSHDIPFVRHLRKSLYGLKQSDRNback to top mRNA from alignment at H-paniculata_contig40893:184..1506- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig40893.10547.1 ID=mRNA_H-paniculata_contig40893.10547.1|Name=mRNA_H-paniculata_contig40893.10547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1323bp|location=Sequence derived from alignment at H-paniculata_contig40893:184..1506- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig40893:184..1506- >mRNA_H-paniculata_contig40893.10547.1 ID=mRNA_H-paniculata_contig40893.10547.1|Name=mRNA_H-paniculata_contig40893.10547.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1740bp|location=Sequence derived from alignment at H-paniculata_contig40893:184..1506- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |