prot_H-paniculata_contig4083.10542.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4083.10542.1
Unique Nameprot_H-paniculata_contig4083.10542.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length134
Homology
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BLAST of mRNA_H-paniculata_contig4083.10542.1 vs. uniprot
Match: D8LBV6_ECTSI (Heat shock protein 40 like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV6_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 9.850e-22
Identity = 60/133 (45.11%), Postives = 76/133 (57.14%), Query Frame = 0 
Query:    1 MLYSLFGGSYQEDAAFSLHQTTKYPTAKVTTQQPGVVEGINYYVTPKFRQLYARDRNQLRRVEKSVTEYFKRQLEYECDDLKHRKSSRVIQAKRRRKSMETEAYAQQVRDAEDMPLPACQELARKFSSFSEYN 133
            M  +LFGG  QE AAFSL +T+ Y   K TTQ+ GVV GI+Y+V PKFRQ YA +  +LRR                              AKR+R++M++EAY Q + + E  PLPAC+ELA KFSS S YN
Sbjct:  296 MFLTLFGGEQQE-AAFSLERTSAYKVPKTTTQEKGVVGGIDYFVAPKFRQKYATNAERLRR------------------------------AKRKRRTMDSEAYDQLILEMETTPLPACEELAVKFSSHSTYN 397
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BLAST of mRNA_H-paniculata_contig4083.10542.1 vs. uniprot
Match: A0A6H5JQ06_9PHAE (HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ06_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 2.890e-17
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:    1 MLYSLFGGSYQEDAAFSLHQTTKYPTAKVTTQQPGVVEGINYYVTPKFRQLYARDRNQLRRVEKSVTEYFKRQLEYECDDLKHRKSSRVIQAKRRRKS 98
            M  +LFGG  QE AAFSL +T+ Y   K TTQ+ GVV GI+Y+V PKFRQ YA +  +LRRVE +VTE +K  L   C+  + +  +RV QA   +K+
Sbjct:  327 MFLTLFGGEQQE-AAFSLERTSAYKIPKTTTQEKGVVGGIDYFVAPKFRQKYATNAERLRRVEVAVTEQYKTNLILNCNYSRQKNQARVAQASEAKKT 423
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4083.10542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBV6_ECTSI9.850e-2245.11Heat shock protein 40 like protein n=1 Tax=Ectocar... [more]
A0A6H5JQ06_9PHAE2.890e-1748.98HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 131... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015399Domain of unknown function DUF1977, DnaJ-likePFAMPF09320DUF1977coord: 11..123
e-value: 5.7E-15
score: 55.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4083contigH-paniculata_contig4083:271..5410 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4083.10542.1mRNA_H-paniculata_contig4083.10542.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4083 230..6453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4083.10542.1 ID=prot_H-paniculata_contig4083.10542.1|Name=mRNA_H-paniculata_contig4083.10542.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp
MLYSLFGGSYQEDAAFSLHQTTKYPTAKVTTQQPGVVEGINYYVTPKFRQ
LYARDRNQLRRVEKSVTEYFKRQLEYECDDLKHRKSSRVIQAKRRRKSME
TEAYAQQVRDAEDMPLPACQELARKFSSFSEYN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015399DUF1977_DnaJ-like