prot_H-paniculata_contig40805.10534.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40805.10534.1
Unique Nameprot_H-paniculata_contig40805.10534.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length98
Homology
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A6J1EPQ0_CUCMO (uncharacterized protein LOC111436713 n=1 Tax=Cucurbita moschata TaxID=3662 RepID=A0A6J1EPQ0_CUCMO)

HSP 1 Score: 88.2 bits (217), Expect = 3.330e-20
Identity = 37/98 (37.76%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 98
            W  A+  + E +E  + W  + ++ KG   +  +W F  K++E G + K KARLVA+G++ QH +D+ EVFAP     +++M+IA+A  N W ++QLD
Sbjct:   40 WRAAIDFKIEAIERNETWE-LTNLPKGMKKIGVKWVFKTKLNENGEVDKYKARLVAKGYAQQHGIDYTEVFAPMARWGTIRMIIALAAWNSWNVYQLD 136          
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A699PHI9_TANCI (Ribonuclease H-like domain, reverse transcriptase, RNA-dependent DNA polymerase (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699PHI9_TANCI)

HSP 1 Score: 89.0 bits (219), Expect = 8.380e-20
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = 0
Query:    1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 98
            W EA++VE + +     W  + ++  G   +S +W F  K DE GN+ K KARLVA+G+ H+H +DF EVFAP     ++++++A+A  N W +  LD
Sbjct:   17 WIEAMKVELDFINRNNTWE-LTTLPTGHKAISLKWVFKTKKDENGNIIKHKARLVAKGYIHEHGIDFEEVFAPVARMKTIRLILAIAANNKWEVHHLD 113          
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 90.5 bits (223), Expect = 1.590e-19
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 98
            W EA+  E + +E    WT V ++ KG   +SA+W F  K+DE+GN+ + KARLVARG+S +  +D+ E FAP V   +V+ ++A A  N + + Q D
Sbjct:  189 WKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFD 286          
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A0L9TUK8_PHAAN (Uncharacterized protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9TUK8_PHAAN)

HSP 1 Score: 91.3 bits (225), Expect = 2.360e-19
Identity = 39/98 (39.80%), Postives = 62/98 (63.27%), Query Frame = 0
Query:    1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 98
            W EA+  E + +E  K W   D+   G   +  +W F  K++E GN+ K KARLVA+G+S Q+ VD+ EVFAP     +V++++A+A ++ W ++QLD
Sbjct:  848 WREAMNAEIQAIEKNKTWELTDAPT-GITPIGVKWVFKTKLNEHGNIEKHKARLVAKGYSQQYGVDYTEVFAPVARLDTVRVLLAIAAQHKWEVFQLD 944          
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A0J7K788_LASNI (Retrotransposon ty1-copia subclass n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K788_LASNI)

HSP 1 Score: 89.0 bits (219), Expect = 4.220e-19
Identity = 41/98 (41.84%), Postives = 68/98 (69.39%), Query Frame = 0
Query:    1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 98
            W EA++ E++ L+  +AW  VD +  G  VV+++W F  K DE+GN T+ KARLVA+G + +H +D+ E F+P V TS+++++++VA+E D  +  LD
Sbjct:    9 WLEAMKNEYKSLKQNEAWILVD-LPAGRRVVNSKWIFKIKKDEKGNTTRYKARLVAKGCTQRHGIDYFETFSPVVRTSTIRLLMSVAIEMDLKIRHLD 105          
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI)

HSP 1 Score: 90.5 bits (223), Expect = 4.280e-19
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 98
            W EA+  E + +E    WT V ++ KG   +SA+W F  K+DE+GN+ + KARLVARG+S +  +D+ E FAP V   +V+ ++A A  N + + Q D
Sbjct:  564 WKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFD 661          
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A5E4G2P8_PRUDU (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4G2P8_PRUDU)

HSP 1 Score: 87.8 bits (216), Expect = 6.050e-19
Identity = 36/98 (36.73%), Postives = 62/98 (63.27%), Query Frame = 0
Query:    1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 98
            W EA+  E + +E  + W   D + KG   +  +W F  K++++G + K KARLVA+G+  +H +D+ EVFAP     ++++VI++A +N W ++QLD
Sbjct:    3 WREAMDNEIKSIEKNQTWELTD-LPKGKQTIGVKWVFRTKLNKKGEVDKHKARLVAKGYKQKHGIDYKEVFAPVARHDTIRLVISLAAQNSWQIFQLD 99          
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A5A7SSH2_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7SSH2_CUCME)

HSP 1 Score: 88.2 bits (217), Expect = 7.620e-19
Identity = 36/98 (36.73%), Postives = 62/98 (63.27%), Query Frame = 0
Query:    1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 98
            W  A+  E + +E  K WT ++ +  G+  +  +W +  K +E G + K KARLVA+G+S QH +D+ +VFAP     +++M++A+A + DW ++QLD
Sbjct:  124 WRLAMDNEIKSIEKNKTWTLIE-LPSGAKRIGVKWVYKTKYNEHGKVDKNKARLVAKGYSQQHEIDYTKVFAPVARMDTIRMIVALAAQKDWKIFQLD 220          
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A151SRC1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SRC1_CAJCA)

HSP 1 Score: 87.8 bits (216), Expect = 9.100e-19
Identity = 37/98 (37.76%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 98
            W EA+ +E + +E  K W   D+  KG   +  +W F  K++E+G++ K KARLV +G+S Q+ VD+ EVFAP     +V++++A+A ++ W +++LD
Sbjct:  185 WREAMNMEIQAIERNKTWELTDAP-KGVTPIGVKWVFKTKLNERGHVEKHKARLVEKGYSQQYGVDYTEVFAPVARLDTVRVLLALAAQHRWEVFELD 281          
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A2N9HSR4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HSR4_FAGSY)

HSP 1 Score: 89.4 bits (220), Expect = 1.100e-18
Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 98
            W+ A+ +E E +E    W   D + KG   +  +W F  K++E G + K KARLVA+G++ Q+ +D+ EVFAP     +++M+IA+A  N W ++QLD
Sbjct:  367 WSAAMDLEIEAIERNGTWELTD-LPKGMKKIGVKWVFKTKLNENGEVDKCKARLVAKGYAQQYGIDYTEVFAPVARWDTIRMIIALAARNSWSVFQLD 463          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6J1EPQ0_CUCMO3.330e-2037.76uncharacterized protein LOC111436713 n=1 Tax=Cucur... [more]
A0A699PHI9_TANCI8.380e-2038.78Ribonuclease H-like domain, reverse transcriptase,... [more]
A0A0J7K416_LASNI1.590e-1940.82Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
A0A0L9TUK8_PHAAN2.360e-1939.80Uncharacterized protein n=1 Tax=Phaseolus angulari... [more]
A0A0J7K788_LASNI4.220e-1941.84Retrotransposon ty1-copia subclass n=1 Tax=Lasius ... [more]
A0A0J7KM48_LASNI4.280e-1940.82Integrase catalytic domain-containing protein n=2 ... [more]
A0A5E4G2P8_PRUDU6.050e-1936.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5A7SSH2_CUCME7.620e-1936.73Retrovirus-related Pol polyprotein from transposon... [more]
A0A151SRC1_CAJCA9.100e-1937.76Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9HSR4_FAGSY1.100e-1838.78Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 17..98
e-value: 1.9E-16
score: 60.4
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..98
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40805contigH-paniculata_contig40805:1565..1858 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40805.10534.1mRNA_H-paniculata_contig40805.10534.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40805 1565..1858 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40805.10534.1 ID=prot_H-paniculata_contig40805.10534.1|Name=mRNA_H-paniculata_contig40805.10534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp
WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKP
KARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like