mRNA_H-paniculata_contig40805.10534.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI) HSP 1 Score: 90.5 bits (223), Expect = 1.590e-19 Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 294
W EA+ E + +E WT V ++ KG +SA+W F K+DE+GN+ + KARLVARG+S + +D+ E FAP V +V+ ++A A N + + Q D
Sbjct: 189 WKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFD 286
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A0L9TUK8_PHAAN (Uncharacterized protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9TUK8_PHAAN) HSP 1 Score: 91.3 bits (225), Expect = 2.360e-19 Identity = 39/98 (39.80%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 294
W EA+ E + +E K W D+ G + +W F K++E GN+ K KARLVA+G+S Q+ VD+ EVFAP +V++++A+A ++ W ++QLD
Sbjct: 848 WREAMNAEIQAIEKNKTWELTDAPT-GITPIGVKWVFKTKLNEHGNIEKHKARLVAKGYSQQYGVDYTEVFAPVARLDTVRVLLAIAAQHKWEVFQLD 944
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A0J7K788_LASNI (Retrotransposon ty1-copia subclass n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K788_LASNI) HSP 1 Score: 89.0 bits (219), Expect = 4.220e-19 Identity = 41/98 (41.84%), Postives = 68/98 (69.39%), Query Frame = 1
Query: 1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 294
W EA++ E++ L+ +AW VD + G VV+++W F K DE+GN T+ KARLVA+G + +H +D+ E F+P V TS+++++++VA+E D + LD
Sbjct: 9 WLEAMKNEYKSLKQNEAWILVD-LPAGRRVVNSKWIFKIKKDEKGNTTRYKARLVAKGCTQRHGIDYFETFSPVVRTSTIRLLMSVAIEMDLKIRHLD 105
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI) HSP 1 Score: 90.5 bits (223), Expect = 4.280e-19 Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 1
Query: 1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 294
W EA+ E + +E WT V ++ KG +SA+W F K+DE+GN+ + KARLVARG+S + +D+ E FAP V +V+ ++A A N + + Q D
Sbjct: 564 WKEAINEELDAMEKNSTWTVVKNLPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQREGIDYEETFAPVVRYETVRTLLAEAAMNKYEIGQFD 661
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A5E4G2P8_PRUDU (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4G2P8_PRUDU) HSP 1 Score: 87.8 bits (216), Expect = 6.050e-19 Identity = 36/98 (36.73%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 294
W EA+ E + +E + W D + KG + +W F K++++G + K KARLVA+G+ +H +D+ EVFAP ++++VI++A +N W ++QLD
Sbjct: 3 WREAMDNEIKSIEKNQTWELTD-LPKGKQTIGVKWVFRTKLNKKGEVDKHKARLVAKGYKQKHGIDYKEVFAPVARHDTIRLVISLAAQNSWQIFQLD 99
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A5A7SSH2_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7SSH2_CUCME) HSP 1 Score: 88.2 bits (217), Expect = 7.620e-19 Identity = 36/98 (36.73%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 294
W A+ E + +E K WT ++ + G+ + +W + K +E G + K KARLVA+G+S QH +D+ +VFAP +++M++A+A + DW ++QLD
Sbjct: 124 WRLAMDNEIKSIEKNKTWTLIE-LPSGAKRIGVKWVYKTKYNEHGKVDKNKARLVAKGYSQQHEIDYTKVFAPVARMDTIRMIVALAAQKDWKIFQLD 220
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A151SRC1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SRC1_CAJCA) HSP 1 Score: 87.8 bits (216), Expect = 9.100e-19 Identity = 37/98 (37.76%), Postives = 64/98 (65.31%), Query Frame = 1
Query: 1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 294
W EA+ +E + +E K W D+ KG + +W F K++E+G++ K KARLV +G+S Q+ VD+ EVFAP +V++++A+A ++ W +++LD
Sbjct: 185 WREAMNMEIQAIERNKTWELTDAP-KGVTPIGVKWVFKTKLNERGHVEKHKARLVEKGYSQQYGVDYTEVFAPVARLDTVRVLLALAAQHRWEVFELD 281
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A4Y1RBF6_PRUDU (ADP glucose pyrophosphorylase large subunit 1 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RBF6_PRUDU) HSP 1 Score: 89.4 bits (220), Expect = 1.100e-18 Identity = 37/98 (37.76%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 294
W EA+ E + +E + W D + KG + +W F K++E+G + K KARLVA+G+ +H +D+ EVFAP ++++VI++A +N W ++QLD
Sbjct: 416 WREAMDNEIKSIEKNQTWELTD-LPKGKQTIGVKWVFRTKLNEKGEVDKHKARLVAKGYKQKHGIDYKEVFAPVARHDTIRLVISLAAQNSWQIFQLD 512
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A4Y1R4M3_PRUDU (ADP glucose pyrophosphorylase large subunit 1 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R4M3_PRUDU) HSP 1 Score: 89.4 bits (220), Expect = 1.120e-18 Identity = 37/98 (37.76%), Postives = 62/98 (63.27%), Query Frame = 1
Query: 1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 294
W EA+ E + +E + W D + KG + +W F K++E+G + K KARLVA+G+ +H +D+ EVFAP ++++VI++A +N W ++QLD
Sbjct: 858 WREAMDNEIKSIEKNQTWELTD-LPKGKQTIGVKWVFRTKLNEKGEVDKHKARLVAKGYKQKHGIDYKEVFAPVARHDTIRLVISLAAQNSWQIFQLD 954
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Match: A0A2K3MGT9_TRIPR (Copia-type polyprotein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MGT9_TRIPR) HSP 1 Score: 88.2 bits (217), Expect = 1.900e-18 Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 1
Query: 1 WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPKARLVARGFSHQHNVDFLEVFAPTVATSSVKMVIAVAVENDWGMWQLD 294
W A+ E E +E W D + G+ + +W F K++E G + K KARLVA+G+S Q+ VD+ EVFAP +++MVIA+A + W ++QLD
Sbjct: 272 WRNAMNNEMEAIEKNNTWELTD-LPTGAKTIGLKWIFKTKLNENGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIALAAQKGWNVYQLD 368 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40805.10534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig40805.10534.1 >prot_H-paniculata_contig40805.10534.1 ID=prot_H-paniculata_contig40805.10534.1|Name=mRNA_H-paniculata_contig40805.10534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=98bp WNEAVRVEFEGLENLKAWTYVDSVRKGSNVVSARWAFAWKIDEQGNLTKPback to top mRNA from alignment at H-paniculata_contig40805:1565..1858+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig40805.10534.1 ID=mRNA_H-paniculata_contig40805.10534.1|Name=mRNA_H-paniculata_contig40805.10534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=294bp|location=Sequence derived from alignment at H-paniculata_contig40805:1565..1858+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig40805:1565..1858+ >mRNA_H-paniculata_contig40805.10534.1 ID=mRNA_H-paniculata_contig40805.10534.1|Name=mRNA_H-paniculata_contig40805.10534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=588bp|location=Sequence derived from alignment at H-paniculata_contig40805:1565..1858+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |