prot_H-paniculata_contig4078.10528.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4078.10528.1
Unique Nameprot_H-paniculata_contig4078.10528.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length100
Homology
BLAST of mRNA_H-paniculata_contig4078.10528.1 vs. uniprot
Match: D7FRA8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRA8_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 6.290e-37
Identity = 63/77 (81.82%), Postives = 69/77 (89.61%), Query Frame = 0
Query:    1 MGEDTGVQISFDDDCRIRVLDPEHFKHSETLEEECRGFVNKIKHFNKSAHSIAEVLHENAARIDKQKLRAIGQRNKV 77
            M ED GVQISFD++CRIRVLDPE FKHSE LEEECRGFV+KI+ FN S H+I EVLHENAARIDK+KLRAIGQRNKV
Sbjct:    1 MNEDNGVQISFDEECRIRVLDPEQFKHSEMLEEECRGFVDKIREFNASVHTIVEVLHENAARIDKEKLRAIGQRNKV 77          
BLAST of mRNA_H-paniculata_contig4078.10528.1 vs. uniprot
Match: A0A836CJD0_9STRA (Intraflagellar transport protein 20 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD0_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 9.230e-23
Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    7 VQISFDDDCRIRVLDPEHFKHSETLEEECRGFVNKIKHFNKSAHSIAEVLHENAARIDKQKLRAIGQRNKV 77
            VQ+SFD++CR+RVLDP+ FKHSE LEE C+ F  K++ FN + H I  VL  +A+RI+KQKLRAIG RNKV
Sbjct:   10 VQVSFDEECRVRVLDPDVFKHSEELEENCKAFATKMQAFNAAVHGIVAVLDAHASRIEKQKLRAIGMRNKV 80          
BLAST of mRNA_H-paniculata_contig4078.10528.1 vs. uniprot
Match: A0A6V2PVC6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2PVC6_HETAK)

HSP 1 Score: 86.7 bits (213), Expect = 9.300e-20
Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    4 DTGVQISFDDDCRIRVLDPEHFKHSETLEEECRGFVNKIKHFNKSAHSIAEVLHENAARIDKQKLRAIGQRNKVHTRRRFR 84
            D  V+ISFDD+ +IRVLD E FKH+E LE EC  FV KI+ F+ + HS+ EVL + A RI+  KL+AIGQRN+V   R  R
Sbjct:    2 DEKVEISFDDEYKIRVLDAEKFKHTEELERECTDFVKKIQDFHSNVHSLVEVLDKQAKRIEHAKLKAIGQRNQVEGERENR 82          
BLAST of mRNA_H-paniculata_contig4078.10528.1 vs. uniprot
Match: A0A7S2W6I1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6I1_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.060e-18
Identity = 40/75 (53.33%), Postives = 56/75 (74.67%), Query Frame = 0
Query:    3 EDTGVQISFDDDCRIRVLDPEHFKHSETLEEECRGFVNKIKHFNKSAHSIAEVLHENAARIDKQKLRAIGQRNKV 77
            E+  V I FD++ R+RVLDPE FKH+E L E+C GFV+KI+ F+ + H + +VL   A +I+++KLRAIGQRN V
Sbjct:    2 EENRVPICFDEESRVRVLDPEKFKHTEELAEQCTGFVSKIQDFSGTVHVLVDVLGAQADKIEREKLRAIGQRNMV 76          
BLAST of mRNA_H-paniculata_contig4078.10528.1 vs. uniprot
Match: A0A7S2GG26_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GG26_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 9.720e-18
Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    1 MGEDTGVQISFDDDCRIRVLDPEHFKHSETLEEECRGFVNKIKHFNKSAHSIAEVLHENAARIDKQKLRAIGQRNKV 77
            M  D  V I FDD+C+IRVL PE F H++ L E+C  FVNKI  F+ + H + E+L   A  I+ +KLR IGQRN+V
Sbjct:    5 MKNDDKVNICFDDECKIRVLSPEKFDHTKELAEQCTAFVNKIADFSDTVHVLVEILDSQAKMIETEKLRTIGQRNRV 81          
BLAST of mRNA_H-paniculata_contig4078.10528.1 vs. uniprot
Match: A0A812IV98_SYMPI (Ift20 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812IV98_SYMPI)

HSP 1 Score: 72.0 bits (175), Expect = 1.460e-14
Identity = 35/70 (50.00%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    7 VQISFDDDCRIRVLDPEHFKHSETLEEECRGFVNKIKHFNKSAHSIAEVLHENAARIDKQKLRAIGQRNK 76
            + I+FD+D RIRV+  E FK +E+LE EC GF  KI+ F+ +   + EVL   A +I+++KLRAIGQRN+
Sbjct:    6 IDITFDEDNRIRVMPKEKFKQTESLEAECHGFAEKIQAFSGTVDMLVEVLDGEAQKIEEEKLRAIGQRNR 75          
BLAST of mRNA_H-paniculata_contig4078.10528.1 vs. uniprot
Match: A0A8J1ZXM1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1ZXM1_9DINO)

HSP 1 Score: 73.2 bits (178), Expect = 1.780e-14
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 0
Query:    4 DTGVQISFDDDCRIRVLDPEHFKHSETLEEECRGFVNKIKHFNKSAHSIAEVLHENAARIDKQKLRAIGQRN 75
            D+ +QI+FD D  IRVLDPE FK  E L +EC+ F  KI  F  +  ++ +VL   A RI+ +KLRAIGQ+N
Sbjct:    3 DSDIQITFDADNHIRVLDPEKFKQMENLSQECQNFTEKIHQFGTTVQTLVDVLDGQAKRIEFEKLRAIGQKN 74          
BLAST of mRNA_H-paniculata_contig4078.10528.1 vs. uniprot
Match: A0A7S2BN10_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2BN10_9DINO)

HSP 1 Score: 70.9 bits (172), Expect = 3.210e-13
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 0
Query:    7 VQISFDDDCRIRVLDPEHFKHSETLEEECRGFVNKIKHFNKSAHSIAEVLHENAARIDKQKLRAIGQRNKV 77
            + I+FDD+ RIRV+  E FK +E LE++C+ F  KIK F  +   + EVL   A +I+ +KLRAIGQRN+ 
Sbjct:   43 IDITFDDENRIRVMPKEKFKQTENLEQQCQNFTEKIKSFGDTVQMLVEVLDGEANKIEYEKLRAIGQRNRA 113          
BLAST of mRNA_H-paniculata_contig4078.10528.1 vs. uniprot
Match: A0A812V2P0_9DINO (MP3 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812V2P0_9DINO)

HSP 1 Score: 72.8 bits (177), Expect = 4.170e-13
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    7 VQISFDDDCRIRVLDPEHFKHSETLEEECRGFVNKIKHFNKSAHSIAEVLHENAARIDKQKLRAIGQRNKV 77
            + I+FD+D RIRV+  E FK +E+LE EC GF +KI+ F+ +   + EVL   A +I+++KLRAIGQRN+ 
Sbjct:    6 IDITFDEDNRIRVMPKEKFKQTESLEAECHGFADKIQAFSGTVDMLVEVLDGEAQKIEEEKLRAIGQRNRA 76          
BLAST of mRNA_H-paniculata_contig4078.10528.1 vs. uniprot
Match: H3GSG3_PHYRM (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3GSG3_PHYRM)

HSP 1 Score: 69.7 bits (169), Expect = 4.300e-13
Identity = 31/76 (40.79%), Postives = 52/76 (68.42%), Query Frame = 0
Query:    2 GEDTGVQISFDDDCRIRVLDPEHFKHSETLEEECRGFVNKIKHFNKSAHSIAEVLHENAARIDKQKLRAIGQRNKV 77
            G++    I FDDDC++RVLD ++  H++ L++E   F  K++ F++    + EV+   A RI+++KL+AIGQRN+V
Sbjct:    4 GDNQLPSICFDDDCQVRVLDKDNITHTQELDQESNQFATKLEEFHEIVKGVLEVMEGQAKRIEREKLKAIGQRNRV 79          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4078.10528.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRA8_ECTSI6.290e-3781.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJD0_9STRA9.230e-2361.97Intraflagellar transport protein 20 n=1 Tax=Tribon... [more]
A0A6V2PVC6_HETAK9.300e-2055.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2W6I1_9STRA1.060e-1853.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2GG26_9STRA9.720e-1850.65Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A812IV98_SYMPI1.460e-1450.00Ift20 protein n=2 Tax=Symbiodinium TaxID=2949 RepI... [more]
A0A8J1ZXM1_9DINO1.780e-1450.00Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A7S2BN10_9DINO3.210e-1347.89Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A812V2P0_9DINO4.170e-1349.30MP3 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=... [more]
H3GSG3_PHYRM4.300e-1340.79Uncharacterized protein n=22 Tax=Peronosporaceae T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028172Intraflagellar transport protein 20PFAMPF14931IFT20coord: 9..84
e-value: 5.3E-24
score: 84.7
IPR028172Intraflagellar transport protein 20PANTHERPTHR31978FAMILY NOT NAMEDcoord: 7..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4078contigH-paniculata_contig4078:12809..13108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4078.10528.1mRNA_H-paniculata_contig4078.10528.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4078 12809..13115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4078.10528.1 ID=prot_H-paniculata_contig4078.10528.1|Name=mRNA_H-paniculata_contig4078.10528.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp
MGEDTGVQISFDDDCRIRVLDPEHFKHSETLEEECRGFVNKIKHFNKSAH
SIAEVLHENAARIDKQKLRAIGQRNKVHTRRRFRGHDLHTHCARYVSIQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028172FT20