prot_H-paniculata_contig4075.10525.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4075.10525.1
Unique Nameprot_H-paniculata_contig4075.10525.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length473
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4075.10525.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012292Globin/ProtoglobinGENE3D1.10.490.10coord: 146..296
e-value: 2.8E-13
score: 52.1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..472
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 13..32
IPR000971GlobinPROSITEPS01033GLOBINcoord: 152..285
score: 9.071
IPR009050Globin-like superfamilySUPERFAMILY46458Globin-likecoord: 151..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4075contigH-paniculata_contig4075:9179..15111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4075.10525.1mRNA_H-paniculata_contig4075.10525.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4075 9168..16068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4075.10525.1 ID=prot_H-paniculata_contig4075.10525.1|Name=mRNA_H-paniculata_contig4075.10525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=473bp
MSHVQNLVRRNSNIPGWVPAVFAIVVVAWLSVKIAAGGGVGQAGGGFGDI
DSNDGRSGSSSGEIGGNSPRDEDDPDTGDAGSSAGGSGEVEGDGDSGDGD
SCGGESPAGTEEGEVAHDSGEEDFVVLAKEEIGPAIRSACSCAPFQECCA
EVRKVWELLQPSHVESTCARMYDILRENDPVAASLLAGLAAPAEQHRTLT
ILMSTIISRSAKPALLEETLRSLGERHIQRGAKETHFLSMGQASIQALAE
TLRIGKQEQGGKEPPFPPIAATAAAAWEAFFTTVSGCMMLAGAGMAPRQC
ACRRRMRESRMPVIGAAAAAVDTSDRSSRERNLVTDSKDSSENGSDTGQQ
PAAAAVMVDACCGYSRDNGTPRSIGSEGRSENCSKSRPVASANGESLTRA
ESRVVHVGWERRDGLPSFSLILESSLALPSTMEKASLDAKIQSLPSPAVP
EAMPACGGMEAVESGNGSVRVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012292Globin/Proto
IPR000971Globin
IPR009050Globin-like_sf