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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 4 |
| Model size | 2387 |
| Cds size | 1419 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4075.10525.1 >prot_H-paniculata_contig4075.10525.1 ID=prot_H-paniculata_contig4075.10525.1|Name=mRNA_H-paniculata_contig4075.10525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=473bp
MSHVQNLVRRNSNIPGWVPAVFAIVVVAWLSVKIAAGGGVGQAGGGFGDI
DSNDGRSGSSSGEIGGNSPRDEDDPDTGDAGSSAGGSGEVEGDGDSGDGD
SCGGESPAGTEEGEVAHDSGEEDFVVLAKEEIGPAIRSACSCAPFQECCA
EVRKVWELLQPSHVESTCARMYDILRENDPVAASLLAGLAAPAEQHRTLT
ILMSTIISRSAKPALLEETLRSLGERHIQRGAKETHFLSMGQASIQALAE
TLRIGKQEQGGKEPPFPPIAATAAAAWEAFFTTVSGCMMLAGAGMAPRQC
ACRRRMRESRMPVIGAAAAAVDTSDRSSRERNLVTDSKDSSENGSDTGQQ
PAAAAVMVDACCGYSRDNGTPRSIGSEGRSENCSKSRPVASANGESLTRA
ESRVVHVGWERRDGLPSFSLILESSLALPSTMEKASLDAKIQSLPSPAVP
EAMPACGGMEAVESGNGSVRVM* back to topmRNA from alignment at H-paniculata_contig4075:9168..16068+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4075.10525.1 ID=mRNA_H-paniculata_contig4075.10525.1|Name=mRNA_H-paniculata_contig4075.10525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6901bp|location=Sequence derived from alignment at H-paniculata_contig4075:9168..16068+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTCGTACATCATGTCTCACGTACAGAACTTGGTGAGGCGCAATTCTAAT
ATTCCCGGCTGGGTCCCAGCCGTCTTCGCGATCGTTGTGGTCGCCTGGCT
CTCTGTGAAGATAGCCGCAGGCGGCGGCGTAGGACAGGCCGGGGGGGGCT
TCGGCGACATCGATTCAAACGACGGTCGCTCAGGGAGCAGCAGCGGTGAG
ATCGGCGGCAACTCGCCCAGGGACGAAGATGACCCTGATACCGGCGACGC
TGGGAGTTCTGCTGGGGGTAGCGGGGAGGTAGAGGGCGATGGCGATAGTG
GTGATGGTGATAGCTGTGGTGGCGAGAGTCCGGCTGGTACTGAGGAAGGA
GAGGTAGCACATGACAGTGGAGAGGAAGATTTCGTTGTGCTTGCCAAGGA
GGAGGTGCGGGCCAGCGGCATGTTGCAGTTGGAATTGACTGTACACTACT
CTACTACTTGAGTTGTTGAAAGCACCACATGTCGTGTAGATTGAAAGGTA
GGAGTTGTTTTCAATATTTCAGAGTTTCAATCGAATTCATGCTGCTCATG
CTGTCCGGTTTGTGAACTTTGGTGTGTCCTTGTTACGCTAGCGTGCTATC
TTCGGTAAAGCCTTCTGCTGCCACCGCGTGCCCTGTCAAGGGGCACAGAG
TCATATTTCTCATATTATGACAGAAACCGGTGATGAGTTACCTACCTACA
TCACACGTGACCATATCAGTCCGACACACGCCCCACGTATAGGCTCACCC
GAGGACACGCATCACTCTTGCTGGAAAGCAGACTCGCGATAAGTATGGCT
CTGCTTTTGTCGAACAGATTCTAGTCCTAGGGGATCTCGGACAAGGCAGG
GCTTAAACCGTATTCCCCTACTGGTTTGATTCCTTTTAACACACTTTTCT
CTGAGTTCTGCCTCTTGTTGGTAATCTGGTAGACCTCTTTGCATGCTATC
GAAGTGCTGCTCTGTGTATAGTTCGCGCAGCAGCATAGGACAGGCAATAT
TCCAAGACGACAGCACACCAGCGGGATACATTGCGGGACCACGACCTCTG
TATAGTTTTACCGCGAGTATAACAAGCCATTGCCGACAACGCGATGTATT
CGCCATGCATAGACTGCACCGTATAGATCTGATCGCTGTACATTGTCCAT
TAGCCGACTGCGCAGACCCGGAGATCCAAAAGGGGATACGAAACTGACTC
TGGACAAGCTAAATCGAACAATACAAAAGGACCTCGAGAGCAAGGAGAAT
TTCCTGCACGGTTCTAATATTTTTTTACTGTTTTTCGTACAAGCGATATA
CGCCGAATATACATGTGTTTTGGGGGGGTTTTAACCCCCGGAAGGCTAAT
GCTAAAACCTTTATCTCGTGCTTCCATACCGAAGTATTTCTACCGAAGTA
TTTCTACATTTCCTTTAACAGAACAGAATTATGTATTCCTCTTCTGGGTA
GGCGCCACCCCGGTTCGGCCGAACCAAGTAGGCAGTGTGGGAGTTGCACC
CACTAAAAGACCTCTGACTAGACGTCCAGTCATGCTCAGTTCACGAGCTA
CCCTACCCGTTCGGGCGTAAATGCCGTCCGACAGCTTGGCAATGTCTACC
TTACTTTGACAGGGTTTGCTCTCGGCATTAGCTTCTTGCCATGCACTGTG
TCTCACGGGGGTGCTACTGCTACACTCTCCATCCGTCGTACTACTGCCTG
ACATTCTTTGACACAGGCCTTCACCGACCTTGCTGGCTCTGGGCCCCCTG
ACATGCCCCTAGTGGCTCAGTACGAAGGAAAACAATTGACATCCTTCGAA
GTGCTGGATAATAACATAGTATACACACCCTCCCCCCTCCCCACCCCGCA
AAAGCCGTTAACGCACTTTTGGGGGCATGGTTCCACCCTGTATTGTCTGA
GACCTCACGGTAGTCCTCATGTTTAGATGTCTTGAAGAGTACTACACGTC
TTCTGCACAAGTGCTAAATTGTACCGATTGACCAGTCCTTCGCCTCCTAT
CCTTGGGTGGCCATGTCATTTGTCTCTCTTGCCTCTTCTTGTCCGCAGAT
CGGTCCGGCCATTCGCAGCGCATGCTCGTGTGCGCCGTTCCAAGAGTGCT
GTGCCGAGGTTCGCAAAGTGTGGGAACTCCTGCAGCCGAGCCACGTTGAG
GTACGCATGATGGAGAGCTTGGCGATGATAATTTTGCTGGCATGTTCTAT
TTTTGTTATAGATCATGCACATGGCGCGCAAATTGCCTGAAGTGGTGAAA
GTTACGTTTGTGAATAGAACTGTATGATTAAAGCTTGTGGTGAAATTGGC
AAAAAAACAGACATATAGTGGCATCCCGGTAAAAAAATATTATGCATTCA
GAATTTCATAAAAGTATTCTTTTTTTTTTCTCAGGGAGTTCCACAGAGGC
CTTTTTCTATTTGTAAGGCAACTTTATATATTGATGATGGGGTTATTTAT
TTATTTATTCTGAAGCCAGGACACCGAAAACATCCATGACGTATAATTAG
GATTTGCATAACTTACTGAAATTACTCTCATGTAAAAATATAAAAGGTAC
ATTAACATTTATAACAATGCAGTCCACTATTAACATGGCGATGTCTTGTA
CTACCGTTATTTTTGCAGGGATGCCTTGTTTGCTCGCAGCACTCCTAATT
GAGTTTCATGTTCAATTCTTAGTACCGCAACGTATATCCTAAGCGTAGCG
GTACCCAGAGCTCTGATATGCTGGAGACCACGGTGCGGAGAAACCGTTGA
AATTTGAGAACTCTGCTTTTAGATAATGATAATTATATGTGTAGTGCGAA
AAACGTGCTAAACCGACAACCCCTTTTTCTTTTATGATGAAAACTAAGAC
AGCCTCCACGACTGAGGTTACTGTCGCCACTTGACTCTGCTGTTTCTGTA
GTGCAGCTGTTGCGTTGCGTCGTGGGTGGGCTCTGTGGAGGTGGACGCAC
GTCTCGTGGCTGTACACCAAGGCAGCATAGCTACGGCAAAATATTACAGA
GAATAAGCGTAGTACTTCGAGAAAGCCCCGCCTCGCGACATAAAGTTCAG
GGGCACCTGCACCGTCGGTTTCAGAAACATCCAGTTTTGAAAGCTACATC
ACCGTGGGCGTTCTATTAGCATAACCACAAAGCGGCACACCACCAAGGCA
TGGAATCAATCAAACCGCGTCCTCTTAGTGCCATGCAGGAAATCATGCTC
CCAACAGATACCACACGTCCATGGACCATGCAGCTAGTCCACGCGTTGCG
CGGGTTCTGACAAATTTGCTCTTTCAGTTCGTTTAGTTGACCCTTATTTC
GTGCCTATGGGGCTTAGTTTGGTATTGGATTTCGGTGATAAACAAACGAG
GACAGGGAATTTAGGCAGGCATGAACATTTGCCATTGGCCAAACACCATG
CGTGGAATTTTCTTGGTAATATTTCAGCACCAGATGGCCAAAATCCTACC
CCCCTCATCGAAAATGACTTCCCTCGACTTCGCGGTGGGACTGTGAGATG
TATATTTTGCTCCGAAACAGCGCTCGGCGCACAAAGGGTAAAACATGAAA
CGCTCAACAACACGCCATTGGATTGTGATGAATAATTATGACCGCCGCTG
CGTCATATTCGGGTTATCCATGGATGAGTCAAATGCGCTTTCCTATACAA
CTCCTGCAGGCCTGACAGCTCCATGTCTGTCTGGTGATACTGAGGGTATC
GGCGCTGTTGTGCTTCATGTGGATGCTGTGTGTACATGCACAAGCACAGA
TACGTTTCGTCAGCAAAAACTGACCATTTATTCATTGCTGTTTTTTTTTT
TCACGTGATGGGGTGGGGATTATGTGTAAAACGGCGTCCAAAGTGTTGAG
AAAGACACAACTCTCGACGCTGTTTTCTGTCTCTAGCCACTGTATTTCGG
CCAAGGGTGACTTTGACGTCGATGTCTATTTTGGGGACCCATAGTTCAGC
CGTGATGAAAAGTATCGCCGGCATACAGACTTGAAATTCCAGTTTCCGAA
TAATGTCTATATTATTGGCCTTTTTCATGTTGGCCAAAAGCAGCAGCCAC
ATACAAGTCGGTTTACCATCTCATTGTTGCCCGAAGCCATACAATGGGCA
ATGCTGTGGCCATTGAAGTCGGACATTCATCTGACGCCCGTAATAGTGAA
GAAATCGTATTTCATGGCTTCGACAGAACATGTAGTAAAACAGGAAGTAC
ACCAAATGAAAACTTGTAGATCAAGGTCGCGCTACGTTCCGTCGGTGGGA
CTGCCCATACCCCCCCCCCCCGCGCGCCCAGTTACGGGTAAAAAATGGTC
AGGGCGTTGCTAAAACCCCTCAGGAATTTGTCAAATTGCGGCGCGGTAAA
CGAGAGCATGGACCTCGCCCTCTCTTGTTTGCTGTCATTCGACATATCAA
ATCACGACGTCTGCTTAGGGTGTCGCTTTTGGTGCTTCTATGGCATTTAT
GACACTCGCTACCCCCTCCCCTGCGACTCTCCATGCCTACAGAGTACTTG
TGCGCGAATGTACGATATTTTACGAGAGAACGATCCGGTCGCCGCGTCCC
TTCTTGCGGGGCTAGCGGCGCCAGCGGAGCAACACCGCACGTTGACGATA
TTAATGAGCACTATAATCTCGAGGTCGGCAAAACCTGCTCTGCTCGAGGA
GACGCTTCGATCTCTGGGAGAGAGGCATATTCAACGCGGGGTGAGATGGT
GTGCCGTTGCCGTCTTAGGTGCTCTCGTCGCCCTTTTTTGTGTTCGTAAG
CGAATTCTGAATCTGCACAAATACTGCATGCACGTCTAGGGTACATCATT
AGCCTTGGAGGAGGATCAAAGATATATGCGCCCCTCTCTCTATATGTATA
TAATTTTTCAGTTATTTTGGACAAGGCGCGATGCCGCTTCCGTGCCGTCA
ACATGCCTTTTTCAAGCCCCCTCCCTTTGGCGAGAAGTATACTTGGATCT
TTGCGCGTTCCGCCCCTTTTTTTCAGTGTTTTTAGAGAGCTGCAGCAGTG
ATTGATGAGAGAAGATTGGGAAAAACAGTATCACCTTGCGCAATATTTTT
GTATATGTCGGCGAAGTTCGTTCTTTACATTCCCTCCCCGCATGATCGAC
CCAACCCCCTTTTAGCAAAATACAGCATTTTCTGTTGAACCACAGCAACA
TTTCTCGCACGCTTGCGTGTAAATCCATGCGTTCATTACATGTATAATTT
TGAATCGAAATATTACAGGCAAAGGAGACGCATTTTCTATCGATGGGTCA
GGCGTCGATTCAAGCTCTTGCGGAGACCCTCAGAATAGGGAAGCAAGAGC
AGGGCGGGAAAGAACCACCCTTCCCGCCAATCGCCGCCACCGCCGCTGCC
GCTTGGGAGGCATTCTTTACAACGGTGTCGGGGTGCATGATGCTCGCTGG
GGCGGGTATGGCGCCACGACAATGCGCCTGCCGACGCCGAATGAGGGAGA
GCCGAATGCCTGTAATAGGAGCGGCGGCAGCGGCGGTTGATACTTCCGAT
CGTTCTTCACGTGAAAGAAATCTTGTCACCGATTCCAAGGACTCTTCCGA
GAACGGGTCTGATACTGGGCAGCAGCCGGCGGCGGCGGCGGTAATGGTTG
ACGCTTGTTGCGGTTATTCACGAGACAATGGCACCCCTCGTTCCATCGGT
TCTGAAGGCCGTTCCGAGAACTGTTCCAAGAGCCGGCCTGTGGCCAGTGC
TAATGGAGAGTCGTTGACTAGGGCCGAATCGAGGGTTGTTCATGTTGGTT
GGGAGCGGAGGGATGGGTTGCCCAGCTTCAGCCTGATCCTTGAATCGTCG
TTAGCGCTGCCATCAACCATGGAAAAGGCAAGCCTTGACGCTAAAATTCA
ATCGCTTCCTTCTCCAGCTGTGCCTGAGGCGATGCCTGCCTGCGGCGGGA
TGGAGGCCGTGGAGTCAGGCAATGGAAGCGTGCGGGTCATGTAGCTCACA
GTTTGCCAGCTAACTTCCTTCGTGTGCGTCATTGTATAAAGTATTGTTTT
CGCTGACTCCGTCTGTTCGTTTTATTTGTACCTTGTTTCTTCCTTGTGTG
GACAGTGCGTCGTACCCATGTATATATATCCAATGTTGTCAATACAAGAA
ATGACCTGTTACAAGAAGGGCTATATAACTGTTGCTCAGTCCACCGCCAC
AATATAGTGTTTTCGTTGGCGTGTATGTATGTATTATGTATTATGTATAT
ATATATATATATATGTATCGGGTTTTTTTTCAACTGCCAGTTTATTATGT
CGTTTTGTTCAGAATTGTAATGGTCTGTGTTTTGAAGATATTGGTTTTAC
GTGGGTGAGAATTTGGTGTCTTTGTGTGTGTGTGTGGGCACGACTAGCGA
TTCTTGCACTGCAGGAGCTCTGTGTGTATTTTTGCTCTGTTTTTTTTTTC
TCAATCCTGATGGTTGACTGCCAGTGTGAGCTGGATCACTTTGCAACTGC
TGCCGACTTCGTATGCGTGAGTAGGTTCCCCGTGAACTATGCGGATCAAG
GATGGATTATATTGCTCCTTGCTGTTCTGTTGATCTGCGTTTGAATGAGT
AGCCTGGAATGATCGTTTCTAACGTGTCGTCCCGATGGCCGTTGGAGTTG
GTGCGCAGTACAACACGGAAAGCCGCAGATGGTTGTGCGTCGCAACCCCG
AAAAATGCCAGTGCGTTGTACTCTGGGGAATCGTCACCGCAGCAGTCGAC
CGCGAATGAGTGGTTGCGCAAATTTCATTCGCTAACACTGTGGTGATGCG
AACAATTAAAAAAATCGAAGGATATATCAACAACTGTGATACAAGAACAC
GGTAGTTAGGACGAATGTAGTGCGGGTCGGTCCTGCGTATTTTGCCCTTT
TTTACAGAGGAAACAACGAGCTGAAAGTAGGATCGAACTGCGAATAACCC
C back to topCoding sequence (CDS) from alignment at H-paniculata_contig4075:9168..16068+ >mRNA_H-paniculata_contig4075.10525.1 ID=mRNA_H-paniculata_contig4075.10525.1|Name=mRNA_H-paniculata_contig4075.10525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2838bp|location=Sequence derived from alignment at H-paniculata_contig4075:9168..16068+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTCACGTACAGAACTTGGTGAGGCGCAATTCTAATATTCCCGGCTG
GGTCCCAGCCGTCTTCGCGATCGTTGTGGTCGCCTGGCTCTCTGTGAAGA
TAGCCGCAGGCGGCGGCGTAGGACAGGCCGGGGGGGGCTTCGGCGACATC
GATTCAAACGACGGTCGCTCAGGGAGCAGCAGCGGTGAGATCGGCGGCAA
CTCGCCCAGGGACGAAGATGACCCTGATACCGGCGACGCTGGGAGTTCTG
CTGGGGGTAGCGGGGAGGTAGAGGGCGATGGCGATAGTGGTGATGGTGAT
AGCTGTGGTGGCGAGAGTCCGGCTGGTACTGAGGAAGGAGAGGTAGCACA
TGACAGTGGAGAGGAAGATTTCGTTGTGCTTGCCAAGGAGGAGATGTCTC
ACGTACAGAACTTGGTGAGGCGCAATTCTAATATTCCCGGCTGGGTCCCA
GCCGTCTTCGCGATCGTTGTGGTCGCCTGGCTCTCTGTGAAGATAGCCGC
AGGCGGCGGCGTAGGACAGGCCGGGGGGGGCTTCGGCGACATCGATTCAA
ACGACGGTCGCTCAGGGAGCAGCAGCGGTGAGATCGGCGGCAACTCGCCC
AGGGACGAAGATGACCCTGATACCGGCGACGCTGGGAGTTCTGCTGGGGG
TAGCGGGGAGGTAGAGGGCGATGGCGATAGTGGTGATGGTGATAGCTGTG
GTGGCGAGAGTCCGGCTGGTACTGAGGAAGGAGAGGTAGCACATGACAGT
GGAGAGGAAGATTTCGTTGTGCTTGCCAAGGAGGAGATCGGTCCGGCCAT
TCGCAGCGCATGCTCGTGTGCGCCGTTCCAAGAGTGCTGTGCCGAGGTTC
GCAAAGTGTGGGAACTCCTGCAGCCGAGCCACGTTGAGATCGGTCCGGCC
ATTCGCAGCGCATGCTCGTGTGCGCCGTTCCAAGAGTGCTGTGCCGAGGT
TCGCAAAGTGTGGGAACTCCTGCAGCCGAGCCACGTTGAGAGTACTTGTG
CGCGAATGTACGATATTTTACGAGAGAACGATCCGGTCGCCGCGTCCCTT
CTTGCGGGGCTAGCGGCGCCAGCGGAGCAACACCGCACGTTGACGATATT
AATGAGCACTATAATCTCGAGGTCGGCAAAACCTGCTCTGCTCGAGGAGA
CGCTTCGATCTCTGGGAGAGAGGCATATTCAACGCGGGAGTACTTGTGCG
CGAATGTACGATATTTTACGAGAGAACGATCCGGTCGCCGCGTCCCTTCT
TGCGGGGCTAGCGGCGCCAGCGGAGCAACACCGCACGTTGACGATATTAA
TGAGCACTATAATCTCGAGGTCGGCAAAACCTGCTCTGCTCGAGGAGACG
CTTCGATCTCTGGGAGAGAGGCATATTCAACGCGGGGCAAAGGAGACGCA
TTTTCTATCGATGGGTCAGGCGTCGATTCAAGCTCTTGCGGAGACCCTCA
GAATAGGGAAGCAAGAGCAGGGCGGGAAAGAACCACCCTTCCCGCCAATC
GCCGCCACCGCCGCTGCCGCTTGGGAGGCATTCTTTACAACGGTGTCGGG
GTGCATGATGCTCGCTGGGGCGGGTATGGCGCCACGACAATGCGCCTGCC
GACGCCGAATGAGGGAGAGCCGAATGCCTGTAATAGGAGCGGCGGCAGCG
GCGGTTGATACTTCCGATCGTTCTTCACGTGAAAGAAATCTTGTCACCGA
TTCCAAGGACTCTTCCGAGAACGGGTCTGATACTGGGCAGCAGCCGGCGG
CGGCGGCGGTAATGGTTGACGCTTGTTGCGGTTATTCACGAGACAATGGC
ACCCCTCGTTCCATCGGTTCTGAAGGCCGTTCCGAGAACTGTTCCAAGAG
CCGGCCTGTGGCCAGTGCTAATGGAGAGTCGTTGACTAGGGCCGAATCGA
GGGTTGTTCATGTTGGTTGGGAGCGGAGGGATGGGTTGCCCAGCTTCAGC
CTGATCCTTGAATCGTCGTTAGCGCTGCCATCAACCATGGAAAAGGCAAG
CCTTGACGCTAAAATTCAATCGCTTCCTTCTCCAGCTGTGCCTGAGGCGA
TGCCTGCCTGCGGCGGGATGGAGGCCGTGGAGTCAGGCAATGGAAGCGTG
CGGGTCATGTAGGCAAAGGAGACGCATTTTCTATCGATGGGTCAGGCGTC
GATTCAAGCTCTTGCGGAGACCCTCAGAATAGGGAAGCAAGAGCAGGGCG
GGAAAGAACCACCCTTCCCGCCAATCGCCGCCACCGCCGCTGCCGCTTGG
GAGGCATTCTTTACAACGGTGTCGGGGTGCATGATGCTCGCTGGGGCGGG
TATGGCGCCACGACAATGCGCCTGCCGACGCCGAATGAGGGAGAGCCGAA
TGCCTGTAATAGGAGCGGCGGCAGCGGCGGTTGATACTTCCGATCGTTCT
TCACGTGAAAGAAATCTTGTCACCGATTCCAAGGACTCTTCCGAGAACGG
GTCTGATACTGGGCAGCAGCCGGCGGCGGCGGCGGTAATGGTTGACGCTT
GTTGCGGTTATTCACGAGACAATGGCACCCCTCGTTCCATCGGTTCTGAA
GGCCGTTCCGAGAACTGTTCCAAGAGCCGGCCTGTGGCCAGTGCTAATGG
AGAGTCGTTGACTAGGGCCGAATCGAGGGTTGTTCATGTTGGTTGGGAGC
GGAGGGATGGGTTGCCCAGCTTCAGCCTGATCCTTGAATCGTCGTTAGCG
CTGCCATCAACCATGGAAAAGGCAAGCCTTGACGCTAAAATTCAATCGCT
TCCTTCTCCAGCTGTGCCTGAGGCGATGCCTGCCTGCGGCGGGATGGAGG
CCGTGGAGTCAGGCAATGGAAGCGTGCGGGTCATGTAG back to top
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