prot_H-paniculata_contig40708.10519.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig40708.10519.1
Unique Nameprot_H-paniculata_contig40708.10519.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length94
Homology
BLAST of mRNA_H-paniculata_contig40708.10519.1 vs. uniprot
Match: A0A5E8C1W8_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1W8_9ASCO)

HSP 1 Score: 100 bits (249), Expect = 1.070e-23
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    1 LPAGRKAIRTKWIFKQKLKEDGSVARYKARLVAQGFSQVEGEDFLETSAPVARMSTLRTVFRLAAEHDFELEGMDADAAYLNAPV-EELFVKLP 93
            LP GRKAI +KW+FK K K DGS+ RYKARLV  GFSQVEG D+ ET APV R  T+R V  +AA+  F++  MD + A+LN  + E+++++ P
Sbjct:  104 LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQP 197          
BLAST of mRNA_H-paniculata_contig40708.10519.1 vs. uniprot
Match: UPI001CA468C4 (hypothetical protein n=1 Tax=Xylella fastidiosa TaxID=2371 RepID=UPI001CA468C4)

HSP 1 Score: 96.3 bits (238), Expect = 1.320e-23
Identity = 47/94 (50.00%), Postives = 68/94 (72.34%), Query Frame = 0
Query:    1 LPAGRKAIRTKWIFKQKLKEDGSVARYKARLVAQGFSQVEGEDFLETSAPVARMSTLRTVFRLAAEHDFELEGMDADAAYLNAPV-EELFVKLP 93
            LP G KAI  KWIFK+K+K DG++ ++KARLVA+GF+Q EG D+ +T APVAR+ST+R +  +A+ H   +  MD   A+LN  + EE+++K P
Sbjct:   11 LPPGSKAIGCKWIFKKKMKVDGTIDKFKARLVAKGFTQKEGIDYFDTYAPVARISTIRVLLAIASIHKLHIHQMDVKTAFLNGELDEEIYMKQP 104          
BLAST of mRNA_H-paniculata_contig40708.10519.1 vs. uniprot
Match: A0A4Y1R7U6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R7U6_PRUDU)

HSP 1 Score: 97.4 bits (241), Expect = 4.290e-23
Identity = 46/94 (48.94%), Postives = 71/94 (75.53%), Query Frame = 0
Query:    1 LPAGRKAIRTKWIFKQKLKEDGSVARYKARLVAQGFSQVEGEDFLETSAPVARMSTLRTVFRLAAEHDFELEGMDADAAYLNAPV-EELFVKLP 93
            LPAG KAI  KW+F++KLK DGS+ +YKARLVA+GF+Q +G D+ +T +PV+R++T+RT+  LA+ H+  +  MD   A+LN  + EE++++ P
Sbjct:   30 LPAGNKAIGCKWVFRKKLKPDGSIDKYKARLVAKGFTQKKGIDYFDTYSPVSRITTIRTLIALASVHNLVIHQMDVKTAFLNGDLDEEIYMEQP 123          
BLAST of mRNA_H-paniculata_contig40708.10519.1 vs. uniprot
Match: A0A6L2LJ48_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LJ48_TANCI)

HSP 1 Score: 100 bits (250), Expect = 6.500e-23
Identity = 52/94 (55.32%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    1 LPAGRKAIRTKWIFKQKLKEDGSVARYKARLVAQGFSQVEGEDFLETSAPVARMSTLRTVFRLAAEHDFELEGMDADAAYLNAPV-EELFVKLP 93
            LP G KA+R KWI K+K+K DGS+ +YKARLV QGF Q EG DF +T APVAR+ST+R +  LAA HD  +  MD   A+LN  + EE+++K P
Sbjct:   11 LPPGCKALRCKWIIKRKMKVDGSIDKYKARLVIQGFRQNEGIDFFDTYAPVARISTIRLLLALAAIHDLVIHQMDVKTAFLNGDLDEEIYMKQP 104          
BLAST of mRNA_H-paniculata_contig40708.10519.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 100 bits (250), Expect = 8.460e-23
Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 0
Query:    2 PAGRKAIRTKWIFKQKLKEDGSVARYKARLVAQGFSQVEGEDFLETSAPVARMSTLRTVFRLAAEHDFELEGMDADAAYLNAPVEE-LFVKLPP 94
            P  RK I +KW+FK K   DG V +YKARLVAQGFSQVEG D+ ET APV + +++R +  LAA HD+E+  MD  +A+LN  +EE +++K+PP
Sbjct: 1033 PRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPP 1126          
BLAST of mRNA_H-paniculata_contig40708.10519.1 vs. uniprot
Match: A0A5E8C149_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C149_9ASCO)

HSP 1 Score: 100 bits (249), Expect = 1.120e-22
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    1 LPAGRKAIRTKWIFKQKLKEDGSVARYKARLVAQGFSQVEGEDFLETSAPVARMSTLRTVFRLAAEHDFELEGMDADAAYLNAPV-EELFVKLP 93
            LP GRKAI +KW+FK K K DGS+ RYKARLV  GFSQVEG D+ ET APV R  T+R V  +AA+  F++  MD + A+LN  + E+++++ P
Sbjct:  243 LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQP 336          
BLAST of mRNA_H-paniculata_contig40708.10519.1 vs. uniprot
Match: A0A5E8C4W4_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C4W4_9ASCO)

HSP 1 Score: 100 bits (249), Expect = 1.140e-22
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    1 LPAGRKAIRTKWIFKQKLKEDGSVARYKARLVAQGFSQVEGEDFLETSAPVARMSTLRTVFRLAAEHDFELEGMDADAAYLNAPV-EELFVKLP 93
            LP GRKAI +KW+FK K K DGS+ RYKARLV  GFSQVEG D+ ET APV R  T+R V  +AA+  F++  MD + A+LN  + E+++++ P
Sbjct:  745 LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQP 838          
BLAST of mRNA_H-paniculata_contig40708.10519.1 vs. uniprot
Match: A0A5E8CAT7_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8CAT7_9ASCO)

HSP 1 Score: 100 bits (249), Expect = 1.140e-22
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    1 LPAGRKAIRTKWIFKQKLKEDGSVARYKARLVAQGFSQVEGEDFLETSAPVARMSTLRTVFRLAAEHDFELEGMDADAAYLNAPV-EELFVKLP 93
            LP GRKAI +KW+FK K K DGS+ RYKARLV  GFSQVEG D+ ET APV R  T+R V  +AA+  F++  MD + A+LN  + E+++++ P
Sbjct:  487 LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQP 580          
BLAST of mRNA_H-paniculata_contig40708.10519.1 vs. uniprot
Match: A0A5E8C4Z1_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C4Z1_9ASCO)

HSP 1 Score: 100 bits (249), Expect = 1.140e-22
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 0
Query:    1 LPAGRKAIRTKWIFKQKLKEDGSVARYKARLVAQGFSQVEGEDFLETSAPVARMSTLRTVFRLAAEHDFELEGMDADAAYLNAPV-EELFVKLP 93
            LP GRKAI +KW+FK K K DGS+ RYKARLV  GFSQVEG D+ ET APV R  T+R V  +AA+  F++  MD + A+LN  + E+++++ P
Sbjct:  579 LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQP 672          
BLAST of mRNA_H-paniculata_contig40708.10519.1 vs. uniprot
Match: A0A177VNF7_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177VNF7_9BASI)

HSP 1 Score: 100 bits (249), Expect = 1.150e-22
Identity = 49/95 (51.58%), Postives = 67/95 (70.53%), Query Frame = 0
Query:    1 LPAGRKAIRTKWIFKQKLKEDGSVARYKARLVAQGFSQVEGEDFLETSAPVARMSTLRTVFRLAAEHDFELEGMDADAAYLNAPV-EELFVKLPP 94
            LP G+ +I  +W++K KL EDG+ +RYKARLVAQGFSQV G D+ ET AP ARM T+R V  + A+HD  +  MD   AYL   + +E++++LPP
Sbjct:  738 LPKGKASIGCRWVYKLKLDEDGNASRYKARLVAQGFSQVPGRDYTETYAPTARMDTVRLVLTICAQHDLIVHQMDVVVAYLQGHLKDEIYMRLPP 832          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig40708.10519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5E8C1W8_9ASCO1.070e-2353.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI001CA468C41.320e-2350.00hypothetical protein n=1 Tax=Xylella fastidiosa Ta... [more]
A0A4Y1R7U6_PRUDU4.290e-2348.94Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A6L2LJ48_TANCI6.500e-2355.32Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]
A0A0C2WN23_AMAMK8.460e-2353.19Integrase catalytic domain-containing protein (Fra... [more]
A0A5E8C149_9ASCO1.120e-2253.19Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8C4W4_9ASCO1.140e-2253.19Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8CAT7_9ASCO1.140e-2253.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8C4Z1_9ASCO1.140e-2253.19Integrase catalytic domain-containing protein n=1 ... [more]
A0A177VNF7_9BASI1.150e-2251.58Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..94
e-value: 3.4E-26
score: 92.4
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..94
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig40708contigH-paniculata_contig40708:3..284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig40708.10519.1mRNA_H-paniculata_contig40708.10519.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig40708 3..284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig40708.10519.1 ID=prot_H-paniculata_contig40708.10519.1|Name=mRNA_H-paniculata_contig40708.10519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=94bp
LPAGRKAIRTKWIFKQKLKEDGSVARYKARLVAQGFSQVEGEDFLETSAP
VARMSTLRTVFRLAAEHDFELEGMDADAAYLNAPVEELFVKLPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like