prot_H-paniculata_contig4046.10468.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4046.10468.1 vs. uniprot
Match: A0A6H5L663_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L663_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 6.480e-19 Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 0
Query: 2 WSKRLVEVLVDKVDMAQSKSDPCMFRLGKRGVVDMILCVHVDDVIVSGKSVECESLFAALRAEFQTTR-GELKWYLGCAFWHDMVRGVVRITQ--FIDTVIKRFGVETESDLPAS 113
W + LV+ K+DPC+FR GVV MI+ ++VDD++V+G +CE L A+L +F T GE +W+ GCA D G +RI+ +ID+++KRF V++ S +PAS
Sbjct: 31 WGYHAADTLVEN-GFEPCKADPCVFRKMVDGVVVMIVVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECEWFDGCAIERDFEAGTLRISHAAYIDSMVKRFDVQSASRIPAS 144
BLAST of mRNA_H-paniculata_contig4046.10468.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 2.990e-18 Identity = 46/115 (40.00%), Postives = 72/115 (62.61%), Query Frame = 0
Query: 2 WSKRLVEVLVDKVDMAQSKSDPCMFRLGKRGVVDMILCVHVDDVIVSGKSVECESLFAALRAEFQTTR-GELKWYLGCAFWHDMVRGVVRITQ--FIDTVIKRFGVETESDLPAS 113
W + LV+ Q K+DPC+FR VV MI+ ++VDD++V+G +CE L A+L +F T GE +W+ GCA D+ G ++I+Q +ID+++KRF V++ S +PAS
Sbjct: 625 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTRNVGECEWFDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIPAS 738
BLAST of mRNA_H-paniculata_contig4046.10468.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 7.520e-18 Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 0
Query: 2 WSKRLVEVLVDKVDMAQSKSDPCMFRLGKRGVVDMILCVHVDDVIVSGKSVECESLFAALRAEFQTTR-GELKWYLGCAFWHDMVRGVVRITQ--FIDTVIKRFGVETESDLPAS 113
W + LV+ Q K+DPC+FR VV MI+ ++VDD++V+G +CE L A+L +F T E +W+ GCA D+ G +RI+Q +ID+++KRF V++ S +PAS
Sbjct: 449 WGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPAS 562
BLAST of mRNA_H-paniculata_contig4046.10468.1 vs. uniprot
Match: A0A6H5JSU5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSU5_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 1.390e-17 Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 0
Query: 2 WSKRLVEVLVDKVDMAQSKSDPCMFRLGKRGVVDMILCVHVDDVIVSGKSVECESLFAALRAEFQTTR-GELKWYLGCAFWHDMVRGVVRITQ--FIDTVIKRFGVETESDLPAS 113
W E LV+ Q ++DPC+FR VV MIL ++VDD++V+G +CE L +L+ E + GE +W+ GCA D+ G +RI+Q +ID+++KRF V++ S +PAS
Sbjct: 380 WGYHAAETLVEN-GFEQCEADPCIFRKMVDEVVVMILVIYVDDILVAGSDEDCEELLPSLQQEISHQKLGECEWFDGCATERDVEAGTLRISQTAYIDSMVKRFDVQSTSRIPAS 493
BLAST of mRNA_H-paniculata_contig4046.10468.1 vs. uniprot
Match: A0A6H5JJY0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY0_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 3.200e-16 Identity = 44/118 (37.29%), Postives = 71/118 (60.17%), Query Frame = 0
Query: 2 WSKRLVEVLVDKVDMAQSKSDPCMFRLGKRGVVDMILCVHVDDVIVSGKSVECESLFAALRAEFQTTR-GELKWYLGCAFWHDMVRGVVRITQ--FIDTVIKRFGVETESDLPASQQA 116
W + LV+ + K+D C+FR VV MI+ ++ DD++V+G +CE L A+L +F T GE +W+ GCA D+ G +RI+Q +ID+++KRF V++ S +PA+ A
Sbjct: 781 WGYLAADTLVEN-GFEECKADRCVFRKMVDEVVVMIIVIYADDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMLKRFDVQSTSRIPATPGA 897
BLAST of mRNA_H-paniculata_contig4046.10468.1 vs. uniprot
Match: A0A6H5JSK5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK5_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 1.320e-14 Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 0
Query: 2 WSKRLVEVLVDKVDMAQSKSDPCMFRLGKRGVVDMILCVHVDDVIVSGKSVECESLFAALRAEFQTTR-GELKWYLGCAFWHDMVRGVVRITQF--IDTVIKRFGVETESDLPAS 113
W + + LV+ Q K+DPC+F VV +I+ ++VDD++V+G +CE L A+L +F T GE +W GCA D+ G I+Q ID+++KRF V++ +PAS
Sbjct: 491 WGYHVADTLVEN-GFEQCKADPCVFCKMVNEVVVLIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGEREWSDGCAIERDVQAGTFHISQTANIDSMMKRFDVQSTFRIPAS 604
BLAST of mRNA_H-paniculata_contig4046.10468.1 vs. uniprot
Match: A0A6H5KYH9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH9_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 2.010e-10 Identity = 41/115 (35.65%), Postives = 61/115 (53.04%), Query Frame = 0
Query: 2 WSKRLVEVLVDKVDMAQSKSDPCMFRLGKRGVVDMILCVHVDDVIVSGKSVECESLFAALRAEFQTTR-GELKWYLGCAFWHDMVRGVVRITQ--FIDTVIKRFGVETESDLPAS 113
W + LV+ Q K+DPC+FR VD+V V+CE L A+L EF T GE +W+ GCA D+ G + I+Q ++D+++KRF V++ S +PAS
Sbjct: 626 WGYHAADTLVEN-GFEQCKADPCVFRK------------MVDEV------VDCEELLASLNKEFPTKNLGECEWFDGCAIERDVAAGTLTISQTAYVDSMVKRFDVQSASRIPAS 721
BLAST of mRNA_H-paniculata_contig4046.10468.1 vs. uniprot
Match: A0A6H5K123_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K123_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 1.120e-9 Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = 0
Query: 33 VVDMILCVHVDDVIVSGKSVECESLFAALRAEFQTTR-GELKWYLGCAFWHDMVRGVVRI--TQFIDTVIKRFGVETESDLPAS 113
VV MI+ ++VD ++V G +C+ L A+L +F T GE +W+ CA D+ G + I T +ID+++KRF V++ S +PAS
Sbjct: 5 VVVMIIVIYVDIILVDGSDEDCKELLASLNKKFPTKNLGECEWFDRCAIDRDVEAGTLNISETAYIDSMVKRFDVQSTSRIPAS 88
BLAST of mRNA_H-paniculata_contig4046.10468.1 vs. uniprot
Match: A0A6H5KV13_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV13_9PHAE) HSP 1 Score: 62.8 bits (151), Expect = 4.600e-9 Identity = 31/78 (39.74%), Postives = 50/78 (64.10%), Query Frame = 0
Query: 42 VDDVIVSGKSVECESLFAALRAEFQTTR-GELKWYLGCAFWHDMVRGVVRI--TQFIDTVIKRFGVETESDLPASQQA 116
VDD++V+G +CE L A+L +F GE +W+ GCA D+ G ++I T +ID+++KRF V++ S +PA+ A
Sbjct: 1089 VDDILVAGSDEDCEELLASLNEKFLNNNLGECQWFDGCAIERDVEAGTLKISRTAYIDSMVKRFDVQSTSRIPATPGA 1166
BLAST of mRNA_H-paniculata_contig4046.10468.1 vs. uniprot
Match: A0A6H5JQU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU4_9PHAE) HSP 1 Score: 56.2 bits (134), Expect = 8.800e-7 Identity = 38/115 (33.04%), Postives = 58/115 (50.43%), Query Frame = 0
Query: 2 WSKRLVEVLVDKVDMAQSKSDPCMFRLGKRGVVDMILCVHVDDVIVSGKSVECESLFAALRAEFQTTR-GELKWYLGCAFWHDMVRGVVRITQ--FIDTVIKRFGVETESDLPAS 113
W + LV+ Q K+DP +FR VD+V+ L A+L +F T GE +W+ GCA D+ G +RI+Q +ID+++KRF V++ S +PAS
Sbjct: 590 WGSHAADTLVEN-GFEQCKADPWVFRK------------MVDEVV---------ELLASLHKKFPTKNLGEFEWFDGCAIERDVEAGTLRISQTAYIDSMVKRFDVQSTSRIPAS 682 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4046.10468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig4046.10468.1 ID=prot_H-paniculata_contig4046.10468.1|Name=mRNA_H-paniculata_contig4046.10468.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bpback to top |